RNA–Protein interactions for RNA: ENST00000480289.1

ATP6V1C2-203, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 2

Gene ATP6V1C2, Length 385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-203ENST00000480289 NISCHQ9Y2I1 1504 aa28.62■■■□□ 2.17
ATP6V1C2-203ENST00000480289 CCDC180Q9P1Z9 1646 aa25.42■■□□□ 1.66
ATP6V1C2-203ENST00000480289 ABCC9O60706 1549 aa25.01■■□□□ 1.59
ATP6V1C2-203ENST00000480289 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
ATP6V1C2-203ENST00000480289 NACADO15069 1562 aa23.97■■□□□ 1.43
ATP6V1C2-203ENST00000480289 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
ATP6V1C2-203ENST00000480289 MYO15BQ96JP2 1530 aa23.83■■□□□ 1.41
ATP6V1C2-203ENST00000480289 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
ATP6V1C2-203ENST00000480289 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
ATP6V1C2-203ENST00000480289 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
ATP6V1C2-203ENST00000480289 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.34
ATP6V1C2-203ENST00000480289 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
ATP6V1C2-203ENST00000480289 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
ATP6V1C2-203ENST00000480289 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
ATP6V1C2-203ENST00000480289 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
ATP6V1C2-203ENST00000480289 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
ATP6V1C2-203ENST00000480289 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
ATP6V1C2-203ENST00000480289 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
ATP6V1C2-203ENST00000480289 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
ATP6V1C2-203ENST00000480289 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
ATP6V1C2-203ENST00000480289 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
ATP6V1C2-203ENST00000480289 ATAD2BQ9ULI0 1458 aa22.14■■□□□ 1.13
ATP6V1C2-203ENST00000480289 SMARCA2P51531 1590 aa22.08■■□□□ 1.12
ATP6V1C2-203ENST00000480289 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
ATP6V1C2-203ENST00000480289 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
ATP6V1C2-203ENST00000480289 HMGXB3Q12766 1538 aa21.99■■□□□ 1.11
ATP6V1C2-203ENST00000480289 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
ATP6V1C2-203ENST00000480289 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
ATP6V1C2-203ENST00000480289 WIZO95785 1651 aa21.78■■□□□ 1.08
ATP6V1C2-203ENST00000480289 NESP48681 1621 aa21.62■■□□□ 1.05
ATP6V1C2-203ENST00000480289 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
ATP6V1C2-203ENST00000480289 ERCC6Q03468 1493 aa21.55■■□□□ 1.04
ATP6V1C2-203ENST00000480289 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
ATP6V1C2-203ENST00000480289 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
ATP6V1C2-203ENST00000480289 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
ATP6V1C2-203ENST00000480289 CUX2O14529 1486 aa21.38■■□□□ 1.01
ATP6V1C2-203ENST00000480289 CFTRP13569 1480 aa21.35■■□□□ 1.01
ATP6V1C2-203ENST00000480289 CCDC88BA6NC98 1476 aa21.33■■□□□ 1.01
ATP6V1C2-203ENST00000480289 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
ATP6V1C2-203ENST00000480289 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
ATP6V1C2-203ENST00000480289 FANCD2Q9BXW9 1451 aa21.23■□□□□ 0.99
ATP6V1C2-203ENST00000480289 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
ATP6V1C2-203ENST00000480289 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
ATP6V1C2-203ENST00000480289 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
ATP6V1C2-203ENST00000480289 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
ATP6V1C2-203ENST00000480289 WDR62O43379 1518 aa21.13■□□□□ 0.97
ATP6V1C2-203ENST00000480289 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
ATP6V1C2-203ENST00000480289 URB2Q14146 1524 aaKnown RBP21.03■□□□□ 0.96
ATP6V1C2-203ENST00000480289 DNAJC5Q9H3Z4 198 aa20.89■□□□□ 0.93
ATP6V1C2-203ENST00000480289 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
ATP6V1C2-203ENST00000480289 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
ATP6V1C2-203ENST00000480289 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
ATP6V1C2-203ENST00000480289 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
ATP6V1C2-203ENST00000480289 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
ATP6V1C2-203ENST00000480289 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
ATP6V1C2-203ENST00000480289 CUX1P39880 1505 aa20.68■□□□□ 0.9
ATP6V1C2-203ENST00000480289 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.9
ATP6V1C2-203ENST00000480289 SOGA1O94964 1423 aa20.63■□□□□ 0.89
ATP6V1C2-203ENST00000480289 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
ATP6V1C2-203ENST00000480289 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
ATP6V1C2-203ENST00000480289 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.89
ATP6V1C2-203ENST00000480289 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
ATP6V1C2-203ENST00000480289 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
ATP6V1C2-203ENST00000480289 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
ATP6V1C2-203ENST00000480289 OSCARQ8IYS5 282 aa20.52■□□□□ 0.88
ATP6V1C2-203ENST00000480289 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
ATP6V1C2-203ENST00000480289 TOP2BQ02880 1626 aa20.47■□□□□ 0.87
ATP6V1C2-203ENST00000480289 WDR97A6NE52 1622 aa20.46■□□□□ 0.87
ATP6V1C2-203ENST00000480289 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
ATP6V1C2-203ENST00000480289 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
ATP6V1C2-203ENST00000480289 ABCA10Q8WWZ4 1543 aa20.43■□□□□ 0.86
ATP6V1C2-203ENST00000480289 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
ATP6V1C2-203ENST00000480289 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
ATP6V1C2-203ENST00000480289 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
ATP6V1C2-203ENST00000480289 FBLN2P98095 1184 aa20.35■□□□□ 0.85
ATP6V1C2-203ENST00000480289 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.85
ATP6V1C2-203ENST00000480289 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.84
ATP6V1C2-203ENST00000480289 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
ATP6V1C2-203ENST00000480289 CHD1O14646 1710 aa20.28■□□□□ 0.84
ATP6V1C2-203ENST00000480289 SYNJ2O15056 1496 aa20.26■□□□□ 0.83
ATP6V1C2-203ENST00000480289 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
ATP6V1C2-203ENST00000480289 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
ATP6V1C2-203ENST00000480289 FHAD1B1AJZ9 1412 aa20.15■□□□□ 0.82
ATP6V1C2-203ENST00000480289 ADAMTS12P58397 1594 aa20.13■□□□□ 0.81
ATP6V1C2-203ENST00000480289 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
ATP6V1C2-203ENST00000480289 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
ATP6V1C2-203ENST00000480289 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
ATP6V1C2-203ENST00000480289 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
ATP6V1C2-203ENST00000480289 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
ATP6V1C2-203ENST00000480289 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
ATP6V1C2-203ENST00000480289 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
ATP6V1C2-203ENST00000480289 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
ATP6V1C2-203ENST00000480289 IGF1RP08069 1367 aa20.08■□□□□ 0.81
ATP6V1C2-203ENST00000480289 NUP160Q12769 1436 aa20.05■□□□□ 0.8
ATP6V1C2-203ENST00000480289 CEP170Q5SW79 1584 aa20■□□□□ 0.79
ATP6V1C2-203ENST00000480289 CYB5RLQ6IPT4 315 aa20■□□□□ 0.79
ATP6V1C2-203ENST00000480289 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
ATP6V1C2-203ENST00000480289 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
ATP6V1C2-203ENST00000480289 CUL7Q14999 1698 aa19.94■□□□□ 0.78
ATP6V1C2-203ENST00000480289 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms