RNA–Protein interactions for RNA: ENST00000480196.2

URB1-202, Transcript of URB1 ribosome biogenesis 1 homolog (S. cerevisiae), humanhuman

TSL 3

Gene URB1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB1-202ENST00000480196 NISCHQ9Y2I1 1504 aa30.28■■■□□ 2.44
URB1-202ENST00000480196 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
URB1-202ENST00000480196 ABCC9O60706 1549 aa27.21■■□□□ 1.95
URB1-202ENST00000480196 RB1CC1Q8TDY2 1594 aa25.95■■□□□ 1.75
URB1-202ENST00000480196 NACADO15069 1562 aa25.73■■□□□ 1.71
URB1-202ENST00000480196 UNC13AQ9UPW8 1703 aa25.52■■□□□ 1.68
URB1-202ENST00000480196 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
URB1-202ENST00000480196 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
URB1-202ENST00000480196 MYO15BQ96JP2 1530 aa25.33■■□□□ 1.65
URB1-202ENST00000480196 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.62
URB1-202ENST00000480196 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
URB1-202ENST00000480196 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
URB1-202ENST00000480196 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
URB1-202ENST00000480196 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
URB1-202ENST00000480196 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
URB1-202ENST00000480196 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.53
URB1-202ENST00000480196 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.52
URB1-202ENST00000480196 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
URB1-202ENST00000480196 SMARCA4P51532 1647 aa23.72■■□□□ 1.39
URB1-202ENST00000480196 NCAPD3P42695 1498 aa23.66■■□□□ 1.38
URB1-202ENST00000480196 SMARCA2P51531 1590 aa23.63■■□□□ 1.37
URB1-202ENST00000480196 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
URB1-202ENST00000480196 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
URB1-202ENST00000480196 BAZ1AQ9NRL2 1556 aaPredicted RBP23.56■■□□□ 1.36
URB1-202ENST00000480196 ERCC6Q03468 1493 aa23.52■■□□□ 1.36
URB1-202ENST00000480196 CUX2O14529 1486 aa23.47■■□□□ 1.35
URB1-202ENST00000480196 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
URB1-202ENST00000480196 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
URB1-202ENST00000480196 NESP48681 1621 aa23.37■■□□□ 1.33
URB1-202ENST00000480196 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
URB1-202ENST00000480196 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
URB1-202ENST00000480196 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
URB1-202ENST00000480196 LAMC3Q9Y6N6 1575 aa23.26■■□□□ 1.31
URB1-202ENST00000480196 KIF21AQ7Z4S6 1674 aa23.23■■□□□ 1.31
URB1-202ENST00000480196 WIZO95785 1651 aa23.15■■□□□ 1.3
URB1-202ENST00000480196 PDS5BQ9NTI5 1447 aa23.01■■□□□ 1.27
URB1-202ENST00000480196 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
URB1-202ENST00000480196 MRC2Q9UBG0 1479 aa22.89■■□□□ 1.25
URB1-202ENST00000480196 WDR62O43379 1518 aa22.87■■□□□ 1.25
URB1-202ENST00000480196 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
URB1-202ENST00000480196 CEP164Q9UPV0 1460 aa22.82■■□□□ 1.24
URB1-202ENST00000480196 RSF1Q96T23 1441 aaPredicted RBP22.78■■□□□ 1.24
URB1-202ENST00000480196 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
URB1-202ENST00000480196 FANCD2Q9BXW9 1451 aa22.75■■□□□ 1.23
URB1-202ENST00000480196 CFTRP13569 1480 aa22.71■■□□□ 1.23
URB1-202ENST00000480196 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
URB1-202ENST00000480196 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
URB1-202ENST00000480196 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
URB1-202ENST00000480196 TOPBP1Q92547 1522 aa22.34■■□□□ 1.17
URB1-202ENST00000480196 IFT140Q96RY7 1462 aa22.32■■□□□ 1.16
URB1-202ENST00000480196 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
URB1-202ENST00000480196 EIF4G3O43432 1585 aaKnown RBP22.3■■□□□ 1.16
URB1-202ENST00000480196 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
URB1-202ENST00000480196 ABCC8Q09428 1581 aa22.24■■□□□ 1.15
URB1-202ENST00000480196 OSCARQ8IYS5 282 aa22.21■■□□□ 1.15
URB1-202ENST00000480196 CHD1O14646 1710 aa22.18■■□□□ 1.14
URB1-202ENST00000480196 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
URB1-202ENST00000480196 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
URB1-202ENST00000480196 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
URB1-202ENST00000480196 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
URB1-202ENST00000480196 POLA1P09884 1462 aaPredicted RBP22.1■■□□□ 1.13
URB1-202ENST00000480196 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
URB1-202ENST00000480196 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.122e-6■■■■□ 22
URB1-202ENST00000480196 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
URB1-202ENST00000480196 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
URB1-202ENST00000480196 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
URB1-202ENST00000480196 CUX1P39880 1505 aa21.96■■□□□ 1.11
URB1-202ENST00000480196 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
URB1-202ENST00000480196 SOGA1O94964 1423 aa21.91■■□□□ 1.1
URB1-202ENST00000480196 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
URB1-202ENST00000480196 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
URB1-202ENST00000480196 FBLN2P98095 1184 aa21.84■■□□□ 1.09
URB1-202ENST00000480196 ARAP1Q96P48 1450 aa21.83■■□□□ 1.08
URB1-202ENST00000480196 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
URB1-202ENST00000480196 SYNJ1O43426 1573 aa21.82■■□□□ 1.08
URB1-202ENST00000480196 CLASP1Q7Z460 1538 aa21.81■■□□□ 1.08
URB1-202ENST00000480196 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
URB1-202ENST00000480196 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
URB1-202ENST00000480196 SYNJ2O15056 1496 aa21.73■■□□□ 1.07
URB1-202ENST00000480196 CYB5RLQ6IPT4 315 aa21.72■■□□□ 1.07
URB1-202ENST00000480196 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
URB1-202ENST00000480196 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
URB1-202ENST00000480196 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
URB1-202ENST00000480196 BIVM-ERCC5R4GMW8 1640 aa21.7■■□□□ 1.06
URB1-202ENST00000480196 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
URB1-202ENST00000480196 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
URB1-202ENST00000480196 ADAMTS12P58397 1594 aa21.62■■□□□ 1.05
URB1-202ENST00000480196 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
URB1-202ENST00000480196 GRIN2AQ12879 1464 aa21.54■■□□□ 1.04
URB1-202ENST00000480196 TRHP20396 242 aaPredicted RBP21.52■■□□□ 1.04
URB1-202ENST00000480196 CEP170Q5SW79 1584 aa21.52■■□□□ 1.04
URB1-202ENST00000480196 ERCC6L2Q5T890 1561 aa21.47■■□□□ 1.03
URB1-202ENST00000480196 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
URB1-202ENST00000480196 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
URB1-202ENST00000480196 NUP160Q12769 1436 aa21.43■■□□□ 1.02
URB1-202ENST00000480196 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
URB1-202ENST00000480196 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
URB1-202ENST00000480196 CUL7Q14999 1698 aa21.24■□□□□ 0.99
URB1-202ENST00000480196 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
URB1-202ENST00000480196 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms