RNA–Protein interactions for RNA: ENST00000480163.1

USP19-212, Transcript of ubiquitin specific peptidase 19, humanhuman

TSL 3

Gene USP19, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-212ENST00000480163 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
USP19-212ENST00000480163 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
USP19-212ENST00000480163 ABCC9O60706 1549 aa32.86■■■□□ 2.85
USP19-212ENST00000480163 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
USP19-212ENST00000480163 DCAF8L2P0C7V8 631 aa31.4■■■□□ 2.62
USP19-212ENST00000480163 NACADO15069 1562 aa31.37■■■□□ 2.61
USP19-212ENST00000480163 MYO15BQ96JP2 1530 aa31.05■■■□□ 2.56
USP19-212ENST00000480163 ZCCHC6Q5VYS8 1495 aaKnown RBP30.99■■■□□ 2.55
USP19-212ENST00000480163 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
USP19-212ENST00000480163 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.51
USP19-212ENST00000480163 PABPN1Q86U42 306 aaKnown RBP eCLIP30.67■■■□□ 2.5
USP19-212ENST00000480163 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
USP19-212ENST00000480163 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
USP19-212ENST00000480163 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
USP19-212ENST00000480163 SHROOM4Q9ULL8 1493 aa30.17■■■□□ 2.42
USP19-212ENST00000480163 EIF4G1Q04637 1599 aaKnown RBP29.72■■■□□ 2.35
USP19-212ENST00000480163 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
USP19-212ENST00000480163 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
USP19-212ENST00000480163 SMARCA4P51532 1647 aa28.99■■■□□ 2.23
USP19-212ENST00000480163 BAZ1AQ9NRL2 1556 aaPredicted RBP28.95■■■□□ 2.22
USP19-212ENST00000480163 NCAPD3P42695 1498 aa28.92■■■□□ 2.22
USP19-212ENST00000480163 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
USP19-212ENST00000480163 SMARCA2P51531 1590 aa28.89■■■□□ 2.22
USP19-212ENST00000480163 HMGXB3Q12766 1538 aa28.76■■■□□ 2.19
USP19-212ENST00000480163 MROH2BQ7Z745 1585 aa28.73■■■□□ 2.19
USP19-212ENST00000480163 BAZ1BQ9UIG0 1483 aaKnown RBP28.7■■■□□ 2.18
USP19-212ENST00000480163 PEG3Q9GZU2 1588 aa28.68■■■□□ 2.18
USP19-212ENST00000480163 WIZO95785 1651 aa28.41■■■□□ 2.14
USP19-212ENST00000480163 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
USP19-212ENST00000480163 NESP48681 1621 aa28.32■■■□□ 2.12
USP19-212ENST00000480163 RSF1Q96T23 1441 aaPredicted RBP28.31■■■□□ 2.12
USP19-212ENST00000480163 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
USP19-212ENST00000480163 CUX2O14529 1486 aa28.13■■■□□ 2.09
USP19-212ENST00000480163 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
USP19-212ENST00000480163 CADPSQ9ULU8 1353 aa28.1■■■□□ 2.09
USP19-212ENST00000480163 PDS5BQ9NTI5 1447 aa28.09■■■□□ 2.09
USP19-212ENST00000480163 KIF21AQ7Z4S6 1674 aa27.97■■■□□ 2.07
USP19-212ENST00000480163 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
USP19-212ENST00000480163 CFTRP13569 1480 aa27.85■■■□□ 2.05
USP19-212ENST00000480163 MRC2Q9UBG0 1479 aa27.79■■■□□ 2.04
USP19-212ENST00000480163 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
USP19-212ENST00000480163 FANCD2Q9BXW9 1451 aa27.78■■■□□ 2.04
USP19-212ENST00000480163 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
USP19-212ENST00000480163 WDR62O43379 1518 aa27.67■■■□□ 2.02
USP19-212ENST00000480163 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
USP19-212ENST00000480163 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
USP19-212ENST00000480163 SUPT5HO00267 1087 aaKnown RBP27.5■■□□□ 1.99
USP19-212ENST00000480163 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
USP19-212ENST00000480163 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
USP19-212ENST00000480163 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
USP19-212ENST00000480163 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
USP19-212ENST00000480163 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
USP19-212ENST00000480163 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
USP19-212ENST00000480163 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
USP19-212ENST00000480163 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
USP19-212ENST00000480163 CUX1P39880 1505 aa26.97■■□□□ 1.91
USP19-212ENST00000480163 OSCARQ8IYS5 282 aa26.97■■□□□ 1.91
USP19-212ENST00000480163 EIF4G3O43432 1585 aaKnown RBP26.97■■□□□ 1.91
USP19-212ENST00000480163 SOGA1O94964 1423 aa26.96■■□□□ 1.91
USP19-212ENST00000480163 FGD5Q6ZNL6 1462 aa26.94■■□□□ 1.9
USP19-212ENST00000480163 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
USP19-212ENST00000480163 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.9
USP19-212ENST00000480163 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
USP19-212ENST00000480163 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
USP19-212ENST00000480163 FBLN2P98095 1184 aa26.74■■□□□ 1.87
USP19-212ENST00000480163 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
USP19-212ENST00000480163 CHD1O14646 1710 aa26.68■■□□□ 1.86
USP19-212ENST00000480163 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
USP19-212ENST00000480163 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
USP19-212ENST00000480163 ABCA10Q8WWZ4 1543 aa26.66■■□□□ 1.86
USP19-212ENST00000480163 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
USP19-212ENST00000480163 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
USP19-212ENST00000480163 SYNJ1O43426 1573 aa26.64■■□□□ 1.86
USP19-212ENST00000480163 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.86
USP19-212ENST00000480163 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
USP19-212ENST00000480163 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
USP19-212ENST00000480163 CHMP7Q8WUX9 453 aaPredicted RBP26.6■■□□□ 1.85
USP19-212ENST00000480163 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
USP19-212ENST00000480163 ABCA5Q8WWZ7 1642 aa26.56■■□□□ 1.84
USP19-212ENST00000480163 SYNJ2O15056 1496 aa26.52■■□□□ 1.84
USP19-212ENST00000480163 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
USP19-212ENST00000480163 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
USP19-212ENST00000480163 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
USP19-212ENST00000480163 ARHGEF11O15085 1522 aa26.48■■□□□ 1.83
USP19-212ENST00000480163 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
USP19-212ENST00000480163 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
USP19-212ENST00000480163 ADAMTS12P58397 1594 aa26.34■■□□□ 1.81
USP19-212ENST00000480163 FHAD1B1AJZ9 1412 aa26.32■■□□□ 1.8
USP19-212ENST00000480163 GRIN2AQ12879 1464 aa26.31■■□□□ 1.8
USP19-212ENST00000480163 CYB5RLQ6IPT4 315 aa26.31■■□□□ 1.8
USP19-212ENST00000480163 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
USP19-212ENST00000480163 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
USP19-212ENST00000480163 NUP160Q12769 1436 aa26.19■■□□□ 1.78
USP19-212ENST00000480163 CEP170Q5SW79 1584 aa26.16■■□□□ 1.78
USP19-212ENST00000480163 IGF1RP08069 1367 aa26.1■■□□□ 1.77
USP19-212ENST00000480163 CUL7Q14999 1698 aa26.06■■□□□ 1.76
USP19-212ENST00000480163 SHROOM2Q13796 1616 aa26■■□□□ 1.75
USP19-212ENST00000480163 CARMIL1Q5VZK9 1371 aa25.98■■□□□ 1.75
USP19-212ENST00000480163 JPH4Q96JJ6 628 aa25.97■■□□□ 1.75
USP19-212ENST00000480163 ERCC6L2Q5T890 1561 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms