RNA–Protein interactions for RNA: ENST00000480087.5

GPC2-203, Transcript of glypican 2, humanhuman

TSL 2

Gene GPC2, Length 767 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC2-203ENST00000480087 NISCHQ9Y2I1 1504 aa36.24■■■■□ 3.39
GPC2-203ENST00000480087 ABCC9O60706 1549 aa32.96■■■□□ 2.87
GPC2-203ENST00000480087 CCDC180Q9P1Z9 1646 aa32.72■■■□□ 2.83
GPC2-203ENST00000480087 DNAJC5BQ9UF47 199 aa31.56■■■□□ 2.64
GPC2-203ENST00000480087 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
GPC2-203ENST00000480087 NACADO15069 1562 aa30.88■■■□□ 2.53
GPC2-203ENST00000480087 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
GPC2-203ENST00000480087 MYO15BQ96JP2 1530 aa30.48■■■□□ 2.47
GPC2-203ENST00000480087 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
GPC2-203ENST00000480087 UNC13AQ9UPW8 1703 aa30.39■■■□□ 2.45
GPC2-203ENST00000480087 BICRAQ9NZM4 1560 aa30.27■■■□□ 2.44
GPC2-203ENST00000480087 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
GPC2-203ENST00000480087 ZCCHC6Q5VYS8 1495 aaKnown RBP30.05■■■□□ 2.4
GPC2-203ENST00000480087 SHROOM4Q9ULL8 1493 aa29.89■■■□□ 2.38
GPC2-203ENST00000480087 CECR2Q9BXF3 1484 aa29.76■■■□□ 2.35
GPC2-203ENST00000480087 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
GPC2-203ENST00000480087 SCRIBQ14160 1630 aa29.62■■■□□ 2.33
GPC2-203ENST00000480087 EIF4G1Q04637 1599 aaKnown RBP29.53■■■□□ 2.32
GPC2-203ENST00000480087 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
GPC2-203ENST00000480087 CUX2O14529 1486 aa28.65■■■□□ 2.18
GPC2-203ENST00000480087 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
GPC2-203ENST00000480087 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
GPC2-203ENST00000480087 SMARCA2P51531 1590 aa28.33■■■□□ 2.12
GPC2-203ENST00000480087 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
GPC2-203ENST00000480087 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
GPC2-203ENST00000480087 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
GPC2-203ENST00000480087 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
GPC2-203ENST00000480087 NESP48681 1621 aa28.17■■■□□ 2.1
GPC2-203ENST00000480087 PEG3Q9GZU2 1588 aa28.1■■■□□ 2.09
GPC2-203ENST00000480087 BAZ1BQ9UIG0 1483 aaKnown RBP28.06■■■□□ 2.08
GPC2-203ENST00000480087 THOC2Q8NI27 1593 aaKnown RBP27.97■■■□□ 2.07
GPC2-203ENST00000480087 LAMC3Q9Y6N6 1575 aa27.87■■■□□ 2.05
GPC2-203ENST00000480087 MROH2BQ7Z745 1585 aa27.85■■■□□ 2.05
GPC2-203ENST00000480087 TRIM41Q8WV44 630 aa27.76■■■□□ 2.03
GPC2-203ENST00000480087 PDS5BQ9NTI5 1447 aa27.72■■■□□ 2.03
GPC2-203ENST00000480087 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
GPC2-203ENST00000480087 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
GPC2-203ENST00000480087 WIZO95785 1651 aa27.55■■■□□ 2
GPC2-203ENST00000480087 MRC2Q9UBG0 1479 aa27.51■■□□□ 1.99
GPC2-203ENST00000480087 WDR62O43379 1518 aa27.46■■□□□ 1.99
GPC2-203ENST00000480087 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
GPC2-203ENST00000480087 TOP2AP11388 1531 aaKnown RBP27.28■■□□□ 1.96
GPC2-203ENST00000480087 OSCARQ8IYS5 282 aa27.27■■□□□ 1.96
GPC2-203ENST00000480087 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
GPC2-203ENST00000480087 CFTRP13569 1480 aa27.23■■□□□ 1.95
GPC2-203ENST00000480087 FANCD2Q9BXW9 1451 aa27.22■■□□□ 1.95
GPC2-203ENST00000480087 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
GPC2-203ENST00000480087 URB2Q14146 1524 aaKnown RBP27.04■■□□□ 1.92
GPC2-203ENST00000480087 RIMBP3CA6NJZ7 1639 aa26.94■■□□□ 1.9
GPC2-203ENST00000480087 RIMBP3BA6NNM3 1639 aa26.94■■□□□ 1.9
GPC2-203ENST00000480087 RIMBP3Q9UFD9 1639 aa26.94■■□□□ 1.9
GPC2-203ENST00000480087 CCDC88BA6NC98 1476 aa26.86■■□□□ 1.89
GPC2-203ENST00000480087 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
GPC2-203ENST00000480087 ZNF608Q9ULD9 1512 aaPredicted RBP26.81■■□□□ 1.88
GPC2-203ENST00000480087 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
GPC2-203ENST00000480087 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
GPC2-203ENST00000480087 TOPBP1Q92547 1522 aa26.71■■□□□ 1.87
GPC2-203ENST00000480087 CYB5RLQ6IPT4 315 aa26.67■■□□□ 1.86
GPC2-203ENST00000480087 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
GPC2-203ENST00000480087 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
GPC2-203ENST00000480087 ARAP1Q96P48 1450 aa26.53■■□□□ 1.84
GPC2-203ENST00000480087 TRHP20396 242 aaPredicted RBP26.51■■□□□ 1.83
GPC2-203ENST00000480087 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
GPC2-203ENST00000480087 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.83
GPC2-203ENST00000480087 CHD1O14646 1710 aa26.45■■□□□ 1.83
GPC2-203ENST00000480087 POLA1P09884 1462 aaPredicted RBP26.42■■□□□ 1.82
GPC2-203ENST00000480087 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
GPC2-203ENST00000480087 FBLN2P98095 1184 aa26.38■■□□□ 1.81
GPC2-203ENST00000480087 SOGA1O94964 1423 aa26.27■■□□□ 1.8
GPC2-203ENST00000480087 FGD5Q6ZNL6 1462 aa26.24■■□□□ 1.79
GPC2-203ENST00000480087 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
GPC2-203ENST00000480087 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
GPC2-203ENST00000480087 CLASP1Q7Z460 1538 aa26.21■■□□□ 1.79
GPC2-203ENST00000480087 CUX1P39880 1505 aa26.19■■□□□ 1.78
GPC2-203ENST00000480087 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
GPC2-203ENST00000480087 SNAPC4Q5SXM2 1469 aa26.16■■□□□ 1.78
GPC2-203ENST00000480087 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
GPC2-203ENST00000480087 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
GPC2-203ENST00000480087 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
GPC2-203ENST00000480087 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
GPC2-203ENST00000480087 PBRM1Q86U86 1689 aa26.08■■□□□ 1.77
GPC2-203ENST00000480087 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
GPC2-203ENST00000480087 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
GPC2-203ENST00000480087 GAPVD1Q14C86 1478 aa25.99■■□□□ 1.75
GPC2-203ENST00000480087 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
GPC2-203ENST00000480087 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
GPC2-203ENST00000480087 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
GPC2-203ENST00000480087 WRNQ14191 1432 aaPredicted RBP eCLIP25.86■■□□□ 1.73
GPC2-203ENST00000480087 TOP2BQ02880 1626 aa25.85■■□□□ 1.73
GPC2-203ENST00000480087 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
GPC2-203ENST00000480087 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
GPC2-203ENST00000480087 ERCC6L2Q5T890 1561 aa25.77■■□□□ 1.72
GPC2-203ENST00000480087 ERICH3Q5RHP9 1530 aa25.71■■□□□ 1.71
GPC2-203ENST00000480087 NUP160Q12769 1436 aa25.69■■□□□ 1.7
GPC2-203ENST00000480087 FHAD1B1AJZ9 1412 aa25.68■■□□□ 1.7
GPC2-203ENST00000480087 CEP170Q5SW79 1584 aa25.66■■□□□ 1.7
GPC2-203ENST00000480087 SHROOM2Q13796 1616 aa25.63■■□□□ 1.69
GPC2-203ENST00000480087 KIF13AQ9H1H9 1805 aa25.53■■□□□ 1.68
GPC2-203ENST00000480087 PRG4Q92954 1404 aaPredicted RBP25.44■■□□□ 1.66
GPC2-203ENST00000480087 RUSC2Q8N2Y8 1516 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms