RNA–Protein interactions for RNA: ENST00000480034.1

GMPPA-209, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

TSL 2

Gene GMPPA, Length 571 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-209ENST00000480034 NISCHQ9Y2I1 1504 aa47.66■■■■■ 5.22
GMPPA-209ENST00000480034 CCDC180Q9P1Z9 1646 aa42.12■■■■■ 4.33
GMPPA-209ENST00000480034 ABCC9O60706 1549 aa40.4■■■■■ 4.06
GMPPA-209ENST00000480034 ZCCHC6Q5VYS8 1495 aaKnown RBP39.91■■■■□ 3.98
GMPPA-209ENST00000480034 DCAF8L2P0C7V8 631 aa39.48■■■■□ 3.91
GMPPA-209ENST00000480034 DCAF1Q9Y4B6 1507 aa39.4■■■■□ 3.9
GMPPA-209ENST00000480034 NACADO15069 1562 aa39.29■■■■□ 3.88
GMPPA-209ENST00000480034 MYO15BQ96JP2 1530 aa39.23■■■■□ 3.87
GMPPA-209ENST00000480034 RB1CC1Q8TDY2 1594 aa39.2■■■■□ 3.87
GMPPA-209ENST00000480034 SCRIBQ14160 1630 aa38.57■■■■□ 3.77
GMPPA-209ENST00000480034 UNC13AQ9UPW8 1703 aa38.5■■■■□ 3.75
GMPPA-209ENST00000480034 SHROOM4Q9ULL8 1493 aa38.28■■■■□ 3.72
GMPPA-209ENST00000480034 BICRAQ9NZM4 1560 aa37.99■■■■□ 3.67
GMPPA-209ENST00000480034 PABPN1Q86U42 306 aaKnown RBP eCLIP37.81■■■■□ 3.64
GMPPA-209ENST00000480034 CECR2Q9BXF3 1484 aa37.07■■■■□ 3.52
GMPPA-209ENST00000480034 EIF4G1Q04637 1599 aaKnown RBP36.92■■■■□ 3.5
GMPPA-209ENST00000480034 BAZ1AQ9NRL2 1556 aaPredicted RBP36.91■■■■□ 3.5
GMPPA-209ENST00000480034 SMARCA4P51532 1647 aa36.9■■■■□ 3.5
GMPPA-209ENST00000480034 MROH2BQ7Z745 1585 aa36.79■■■■□ 3.48
GMPPA-209ENST00000480034 CC2D2AQ9P2K1 1620 aa36.6■■■■□ 3.45
GMPPA-209ENST00000480034 RSF1Q96T23 1441 aaPredicted RBP36.59■■■■□ 3.45
GMPPA-209ENST00000480034 WIZO95785 1651 aa36.52■■■■□ 3.44
GMPPA-209ENST00000480034 PEG3Q9GZU2 1588 aa36.42■■■■□ 3.42
GMPPA-209ENST00000480034 SMARCA2P51531 1590 aa36.41■■■■□ 3.42
GMPPA-209ENST00000480034 ATAD2BQ9ULI0 1458 aa36.38■■■■□ 3.41
GMPPA-209ENST00000480034 SUPT5HO00267 1087 aaKnown RBP36.34■■■■□ 3.41
GMPPA-209ENST00000480034 BAZ1BQ9UIG0 1483 aaKnown RBP36.19■■■■□ 3.38
GMPPA-209ENST00000480034 DNAJC5BQ9UF47 199 aa36.19■■■■□ 3.38
GMPPA-209ENST00000480034 HMGXB3Q12766 1538 aa36.18■■■■□ 3.38
GMPPA-209ENST00000480034 NCAPD3P42695 1498 aa36.17■■■■□ 3.38
GMPPA-209ENST00000480034 TOP2AP11388 1531 aaKnown RBP36.13■■■■□ 3.37
GMPPA-209ENST00000480034 CCDC88BA6NC98 1476 aa35.63■■■■□ 3.29
GMPPA-209ENST00000480034 PRDM2Q13029 1718 aa35.23■■■■□ 3.23
GMPPA-209ENST00000480034 NESP48681 1621 aa35.21■■■■□ 3.23
GMPPA-209ENST00000480034 LAMC3Q9Y6N6 1575 aa35.2■■■■□ 3.23
GMPPA-209ENST00000480034 CADPSQ9ULU8 1353 aa35.17■■■■□ 3.22
GMPPA-209ENST00000480034 CFTRP13569 1480 aa35.16■■■■□ 3.22
GMPPA-209ENST00000480034 KIF21AQ7Z4S6 1674 aa34.94■■■■□ 3.18
GMPPA-209ENST00000480034 FANCD2Q9BXW9 1451 aa34.86■■■■□ 3.17
GMPPA-209ENST00000480034 PDS5BQ9NTI5 1447 aa34.85■■■■□ 3.17
GMPPA-209ENST00000480034 CEP164Q9UPV0 1460 aa34.77■■■■□ 3.16
GMPPA-209ENST00000480034 ERCC6Q03468 1493 aa34.75■■■■□ 3.15
GMPPA-209ENST00000480034 ABCC8Q09428 1581 aa34.71■■■■□ 3.15
GMPPA-209ENST00000480034 THOC2Q8NI27 1593 aaKnown RBP34.55■■■■□ 3.12
GMPPA-209ENST00000480034 MRC2Q9UBG0 1479 aa34.53■■■■□ 3.12
GMPPA-209ENST00000480034 WRNQ14191 1432 aaPredicted RBP eCLIP34.51■■■■□ 3.12
GMPPA-209ENST00000480034 SYNJ1O43426 1573 aa34.49■■■■□ 3.11
GMPPA-209ENST00000480034 CUX1P39880 1505 aa34.49■■■■□ 3.11
GMPPA-209ENST00000480034 URB2Q14146 1524 aaKnown RBP34.49■■■■□ 3.11
GMPPA-209ENST00000480034 DNMBPQ6XZF7 1577 aa34.48■■■■□ 3.11
GMPPA-209ENST00000480034 BIVM-ERCC5R4GMW8 1640 aa34.44■■■■□ 3.1
GMPPA-209ENST00000480034 TOPBP1Q92547 1522 aa34.41■■■■□ 3.1
GMPPA-209ENST00000480034 TOP2BQ02880 1626 aa34.41■■■■□ 3.1
GMPPA-209ENST00000480034 WDR62O43379 1518 aa34.4■■■■□ 3.1
GMPPA-209ENST00000480034 CHIC1Q5VXU3 224 aa34.32■■■■□ 3.08
GMPPA-209ENST00000480034 FGD5Q6ZNL6 1462 aa34.24■■■■□ 3.07
GMPPA-209ENST00000480034 TRIM41Q8WV44 630 aa34.21■■■■□ 3.07
GMPPA-209ENST00000480034 POLA1P09884 1462 aaPredicted RBP34.17■■■■□ 3.06
GMPPA-209ENST00000480034 CUX2O14529 1486 aa34.04■■■■□ 3.04
GMPPA-209ENST00000480034 RAD54L2Q9Y4B4 1467 aa34.03■■■■□ 3.04
GMPPA-209ENST00000480034 WDR97A6NE52 1622 aa34.03■■■■□ 3.04
GMPPA-209ENST00000480034 TARBP1Q13395 1621 aaKnown RBP34■■■■□ 3.03
GMPPA-209ENST00000480034 SOGA1O94964 1423 aa33.98■■■■□ 3.03
GMPPA-209ENST00000480034 IFT140Q96RY7 1462 aa33.95■■■■□ 3.03
GMPPA-209ENST00000480034 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
GMPPA-209ENST00000480034 EIF4G3O43432 1585 aaKnown RBP33.78■■■■□ 3
GMPPA-209ENST00000480034 ABCA5Q8WWZ7 1642 aa33.78■■■■□ 3
GMPPA-209ENST00000480034 ZNF608Q9ULD9 1512 aaPredicted RBP33.78■■■■□ 3
GMPPA-209ENST00000480034 PBRM1Q86U86 1689 aa33.72■■■□□ 2.99
GMPPA-209ENST00000480034 RUSC2Q8N2Y8 1516 aa33.72■■■□□ 2.99
GMPPA-209ENST00000480034 TDRD9Q8NDG6 1382 aaKnown RBP33.71■■■□□ 2.99
GMPPA-209ENST00000480034 KIF27Q86VH2 1401 aa33.7■■■□□ 2.99
GMPPA-209ENST00000480034 AQRO60306 1485 aaKnown RBP eCLIP33.66■■■□□ 2.988e-9■■■■■ 27.6
GMPPA-209ENST00000480034 GAPVD1Q14C86 1478 aa33.64■■■□□ 2.98
GMPPA-209ENST00000480034 FAM9AQ8IZU1 332 aaPredicted RBP33.6■■■□□ 2.97
GMPPA-209ENST00000480034 EEA1Q15075 1411 aa33.58■■■□□ 2.97
GMPPA-209ENST00000480034 GRIN2BQ13224 1484 aa33.51■■■□□ 2.96
GMPPA-209ENST00000480034 ERICH3Q5RHP9 1530 aa33.5■■■□□ 2.95
GMPPA-209ENST00000480034 CUL7Q14999 1698 aa33.45■■■□□ 2.95
GMPPA-209ENST00000480034 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
GMPPA-209ENST00000480034 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
GMPPA-209ENST00000480034 IGF1RP08069 1367 aa33.39■■■□□ 2.94
GMPPA-209ENST00000480034 CSRNP3Q8WYN3 585 aa33.37■■■□□ 2.93
GMPPA-209ENST00000480034 MAGI1Q96QZ7 1491 aaPredicted RBP33.35■■■□□ 2.93
GMPPA-209ENST00000480034 KIF21BO75037 1637 aa33.3■■■□□ 2.92
GMPPA-209ENST00000480034 CHD1O14646 1710 aa33.27■■■□□ 2.92
GMPPA-209ENST00000480034 CARMIL1Q5VZK9 1371 aa33.26■■■□□ 2.92
GMPPA-209ENST00000480034 FHAD1B1AJZ9 1412 aa33.26■■■□□ 2.91
GMPPA-209ENST00000480034 PRXQ9BXM0 1461 aa33.25■■■□□ 2.91
GMPPA-209ENST00000480034 SYNJ2O15056 1496 aa33.2■■■□□ 2.91
GMPPA-209ENST00000480034 RAPGEF2Q9Y4G8 1499 aa33.19■■■□□ 2.9
GMPPA-209ENST00000480034 EHMT2Q96KQ7 1210 aa33.18■■■□□ 2.9
GMPPA-209ENST00000480034 GOLGA3Q08378 1498 aa33.13■■■□□ 2.89
GMPPA-209ENST00000480034 GRIN2AQ12879 1464 aa33.12■■■□□ 2.89
GMPPA-209ENST00000480034 FBLN2P98095 1184 aa33.09■■■□□ 2.89
GMPPA-209ENST00000480034 CHMP7Q8WUX9 453 aaPredicted RBP33.07■■■□□ 2.88
GMPPA-209ENST00000480034 CTTNBP2Q8WZ74 1663 aa33.04■■■□□ 2.88
GMPPA-209ENST00000480034 CEP170Q5SW79 1584 aa32.99■■■□□ 2.87
GMPPA-209ENST00000480034 LOC105371045A0A1W2PR82 267 aa32.95■■■□□ 2.87
GMPPA-209ENST00000480034 UBTFP17480 764 aaKnown RBP32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms