RNA–Protein interactions for RNA: ENST00000480031.5

APTX-224, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-224ENST00000480031 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
APTX-224ENST00000480031 CCDC180Q9P1Z9 1646 aa21.1■□□□□ 0.97
APTX-224ENST00000480031 ZCCHC6Q5VYS8 1495 aaKnown RBP20.14■□□□□ 0.81
APTX-224ENST00000480031 ABCC9O60706 1549 aa20.07■□□□□ 0.8
APTX-224ENST00000480031 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
APTX-224ENST00000480031 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
APTX-224ENST00000480031 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
APTX-224ENST00000480031 NACADO15069 1562 aa19.71■□□□□ 0.75
APTX-224ENST00000480031 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
APTX-224ENST00000480031 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
APTX-224ENST00000480031 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
APTX-224ENST00000480031 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
APTX-224ENST00000480031 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
APTX-224ENST00000480031 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
APTX-224ENST00000480031 CECR2Q9BXF3 1484 aa18.62■□□□□ 0.57
APTX-224ENST00000480031 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
APTX-224ENST00000480031 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
APTX-224ENST00000480031 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
APTX-224ENST00000480031 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
APTX-224ENST00000480031 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
APTX-224ENST00000480031 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
APTX-224ENST00000480031 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
APTX-224ENST00000480031 WIZO95785 1651 aa18.32■□□□□ 0.52
APTX-224ENST00000480031 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
APTX-224ENST00000480031 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
APTX-224ENST00000480031 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
APTX-224ENST00000480031 CC2D2AQ9P2K1 1620 aa18.18■□□□□ 0.5
APTX-224ENST00000480031 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
APTX-224ENST00000480031 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
APTX-224ENST00000480031 HMGXB3Q12766 1538 aa18.14■□□□□ 0.49
APTX-224ENST00000480031 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
APTX-224ENST00000480031 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
APTX-224ENST00000480031 CFTRP13569 1480 aa17.69■□□□□ 0.42
APTX-224ENST00000480031 CADPSQ9ULU8 1353 aa17.67■□□□□ 0.42
APTX-224ENST00000480031 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
APTX-224ENST00000480031 PRDM2Q13029 1718 aa17.58■□□□□ 0.41
APTX-224ENST00000480031 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
APTX-224ENST00000480031 NESP48681 1621 aa17.53■□□□□ 0.4
APTX-224ENST00000480031 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
APTX-224ENST00000480031 ABCC8Q09428 1581 aa17.47■□□□□ 0.39
APTX-224ENST00000480031 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
APTX-224ENST00000480031 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
APTX-224ENST00000480031 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
APTX-224ENST00000480031 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
APTX-224ENST00000480031 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
APTX-224ENST00000480031 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
APTX-224ENST00000480031 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.37
APTX-224ENST00000480031 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
APTX-224ENST00000480031 CUX1P39880 1505 aa17.33■□□□□ 0.37
APTX-224ENST00000480031 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
APTX-224ENST00000480031 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
APTX-224ENST00000480031 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
APTX-224ENST00000480031 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
APTX-224ENST00000480031 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
APTX-224ENST00000480031 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
APTX-224ENST00000480031 WDR62O43379 1518 aa17.18■□□□□ 0.34
APTX-224ENST00000480031 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
APTX-224ENST00000480031 POLA1P09884 1462 aaPredicted RBP17.15■□□□□ 0.34
APTX-224ENST00000480031 EEA1Q15075 1411 aa17.13■□□□□ 0.33
APTX-224ENST00000480031 SOGA1O94964 1423 aa17.1■□□□□ 0.33
APTX-224ENST00000480031 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
APTX-224ENST00000480031 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
APTX-224ENST00000480031 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
APTX-224ENST00000480031 CUX2O14529 1486 aa17.04■□□□□ 0.32
APTX-224ENST00000480031 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
APTX-224ENST00000480031 RUSC2Q8N2Y8 1516 aa17.02■□□□□ 0.32
APTX-224ENST00000480031 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
APTX-224ENST00000480031 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
APTX-224ENST00000480031 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
APTX-224ENST00000480031 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
APTX-224ENST00000480031 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
APTX-224ENST00000480031 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
APTX-224ENST00000480031 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
APTX-224ENST00000480031 IGF1RP08069 1367 aa16.89■□□□□ 0.29
APTX-224ENST00000480031 KIF21BO75037 1637 aa16.88■□□□□ 0.29
APTX-224ENST00000480031 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
APTX-224ENST00000480031 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
APTX-224ENST00000480031 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
APTX-224ENST00000480031 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
APTX-224ENST00000480031 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.29
APTX-224ENST00000480031 LOC105371045A0A1W2PR82 267 aa16.83■□□□□ 0.28
APTX-224ENST00000480031 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
APTX-224ENST00000480031 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
APTX-224ENST00000480031 CUL7Q14999 1698 aa16.82■□□□□ 0.28
APTX-224ENST00000480031 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
APTX-224ENST00000480031 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
APTX-224ENST00000480031 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
APTX-224ENST00000480031 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
APTX-224ENST00000480031 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
APTX-224ENST00000480031 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
APTX-224ENST00000480031 TNIKQ9UKE5 1360 aa16.73■□□□□ 0.27
APTX-224ENST00000480031 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
APTX-224ENST00000480031 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
APTX-224ENST00000480031 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
APTX-224ENST00000480031 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
APTX-224ENST00000480031 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
APTX-224ENST00000480031 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
APTX-224ENST00000480031 CHMP7Q8WUX9 453 aaPredicted RBP16.58■□□□□ 0.24
APTX-224ENST00000480031 CTTNBP2Q8WZ74 1663 aa16.56■□□□□ 0.24
APTX-224ENST00000480031 CLIP1P30622 1438 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms