RNA–Protein interactions for RNA: ENST00000480012.1

CHRNA4-205, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 4

Gene CHRNA4, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-205ENST00000480012 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
CHRNA4-205ENST00000480012 CCDC180Q9P1Z9 1646 aa27.95■■■□□ 2.06
CHRNA4-205ENST00000480012 ABCC9O60706 1549 aa27.68■■■□□ 2.02
CHRNA4-205ENST00000480012 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
CHRNA4-205ENST00000480012 NACADO15069 1562 aa26.41■■□□□ 1.82
CHRNA4-205ENST00000480012 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
CHRNA4-205ENST00000480012 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
CHRNA4-205ENST00000480012 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
CHRNA4-205ENST00000480012 DNAJC5BQ9UF47 199 aa25.92■■□□□ 1.74
CHRNA4-205ENST00000480012 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.74
CHRNA4-205ENST00000480012 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.74
CHRNA4-205ENST00000480012 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.72
CHRNA4-205ENST00000480012 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
CHRNA4-205ENST00000480012 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
CHRNA4-205ENST00000480012 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
CHRNA4-205ENST00000480012 EIF4G1Q04637 1599 aaKnown RBP25.07■■□□□ 1.6
CHRNA4-205ENST00000480012 CC2D2AQ9P2K1 1620 aa25.06■■□□□ 1.6
CHRNA4-205ENST00000480012 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
CHRNA4-205ENST00000480012 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
CHRNA4-205ENST00000480012 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
CHRNA4-205ENST00000480012 SMARCA4P51532 1647 aa24.3■■□□□ 1.48
CHRNA4-205ENST00000480012 SMARCA2P51531 1590 aa24.24■■□□□ 1.47
CHRNA4-205ENST00000480012 BAZ1AQ9NRL2 1556 aaPredicted RBP24.22■■□□□ 1.47
CHRNA4-205ENST00000480012 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
CHRNA4-205ENST00000480012 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
CHRNA4-205ENST00000480012 MROH2BQ7Z745 1585 aa24.05■■□□□ 1.44
CHRNA4-205ENST00000480012 BAZ1BQ9UIG0 1483 aaKnown RBP24.03■■□□□ 1.44
CHRNA4-205ENST00000480012 CUX2O14529 1486 aa23.87■■□□□ 1.41
CHRNA4-205ENST00000480012 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
CHRNA4-205ENST00000480012 NESP48681 1621 aa23.86■■□□□ 1.41
CHRNA4-205ENST00000480012 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
CHRNA4-205ENST00000480012 WIZO95785 1651 aa23.73■■□□□ 1.39
CHRNA4-205ENST00000480012 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
CHRNA4-205ENST00000480012 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
CHRNA4-205ENST00000480012 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
CHRNA4-205ENST00000480012 PDS5BQ9NTI5 1447 aa23.63■■□□□ 1.37
CHRNA4-205ENST00000480012 THOC2Q8NI27 1593 aaKnown RBP23.6■■□□□ 1.37
CHRNA4-205ENST00000480012 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
CHRNA4-205ENST00000480012 TOP2AP11388 1531 aaKnown RBP23.48■■□□□ 1.35
CHRNA4-205ENST00000480012 CFTRP13569 1480 aa23.42■■□□□ 1.34
CHRNA4-205ENST00000480012 MRC2Q9UBG0 1479 aa23.38■■□□□ 1.33
CHRNA4-205ENST00000480012 WDR62O43379 1518 aa23.34■■□□□ 1.33
CHRNA4-205ENST00000480012 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
CHRNA4-205ENST00000480012 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
CHRNA4-205ENST00000480012 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
CHRNA4-205ENST00000480012 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
CHRNA4-205ENST00000480012 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
CHRNA4-205ENST00000480012 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
CHRNA4-205ENST00000480012 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
CHRNA4-205ENST00000480012 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
CHRNA4-205ENST00000480012 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
CHRNA4-205ENST00000480012 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
CHRNA4-205ENST00000480012 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
CHRNA4-205ENST00000480012 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
CHRNA4-205ENST00000480012 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
CHRNA4-205ENST00000480012 EIF4G3O43432 1585 aaKnown RBP22.64■■□□□ 1.22
CHRNA4-205ENST00000480012 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.21
CHRNA4-205ENST00000480012 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
CHRNA4-205ENST00000480012 SOGA1O94964 1423 aa22.6■■□□□ 1.21
CHRNA4-205ENST00000480012 CUX1P39880 1505 aa22.58■■□□□ 1.21
CHRNA4-205ENST00000480012 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.2
CHRNA4-205ENST00000480012 FGD5Q6ZNL6 1462 aa22.55■■□□□ 1.2
CHRNA4-205ENST00000480012 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
CHRNA4-205ENST00000480012 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
CHRNA4-205ENST00000480012 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
CHRNA4-205ENST00000480012 CHD1O14646 1710 aa22.44■■□□□ 1.18
CHRNA4-205ENST00000480012 RIMBP3CA6NJZ7 1639 aa22.43■■□□□ 1.18
CHRNA4-205ENST00000480012 RIMBP3BA6NNM3 1639 aa22.43■■□□□ 1.18
CHRNA4-205ENST00000480012 RIMBP3Q9UFD9 1639 aa22.43■■□□□ 1.18
CHRNA4-205ENST00000480012 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
CHRNA4-205ENST00000480012 GRIN2BQ13224 1484 aa22.37■■□□□ 1.17
CHRNA4-205ENST00000480012 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
CHRNA4-205ENST00000480012 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
CHRNA4-205ENST00000480012 FBLN2P98095 1184 aa22.36■■□□□ 1.17
CHRNA4-205ENST00000480012 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
CHRNA4-205ENST00000480012 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
CHRNA4-205ENST00000480012 CHMP7Q8WUX9 453 aaPredicted RBP22.29■■□□□ 1.16
CHRNA4-205ENST00000480012 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
CHRNA4-205ENST00000480012 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
CHRNA4-205ENST00000480012 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
CHRNA4-205ENST00000480012 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
CHRNA4-205ENST00000480012 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
CHRNA4-205ENST00000480012 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
CHRNA4-205ENST00000480012 PBRM1Q86U86 1689 aa22.24■■□□□ 1.15
CHRNA4-205ENST00000480012 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
CHRNA4-205ENST00000480012 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
CHRNA4-205ENST00000480012 ARAP1Q96P48 1450 aa22.2■■□□□ 1.14
CHRNA4-205ENST00000480012 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.13
CHRNA4-205ENST00000480012 GRIN2AQ12879 1464 aa22.08■■□□□ 1.12
CHRNA4-205ENST00000480012 ADAMTS12P58397 1594 aa22.07■■□□□ 1.12
CHRNA4-205ENST00000480012 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
CHRNA4-205ENST00000480012 NUP160Q12769 1436 aa22.05■■□□□ 1.12
CHRNA4-205ENST00000480012 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
CHRNA4-205ENST00000480012 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
CHRNA4-205ENST00000480012 IGF1RP08069 1367 aa21.87■■□□□ 1.09
CHRNA4-205ENST00000480012 ERCC6L2Q5T890 1561 aa21.87■■□□□ 1.09
CHRNA4-205ENST00000480012 TRHP20396 242 aaPredicted RBP21.85■■□□□ 1.09
CHRNA4-205ENST00000480012 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
CHRNA4-205ENST00000480012 JPH4Q96JJ6 628 aa21.82■■□□□ 1.08
CHRNA4-205ENST00000480012 PRG4Q92954 1404 aaPredicted RBP21.76■■□□□ 1.07
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