RNA–Protein interactions for RNA: ENST00000480000.5

APOBEC3G-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3G, humanhuman

TSL 2

Gene APOBEC3G, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3G-204ENST00000480000 NISCHQ9Y2I1 1504 aa32.06■■■□□ 2.72
APOBEC3G-204ENST00000480000 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
APOBEC3G-204ENST00000480000 ABCC9O60706 1549 aa28.68■■■□□ 2.18
APOBEC3G-204ENST00000480000 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
APOBEC3G-204ENST00000480000 NACADO15069 1562 aa27.19■■□□□ 1.94
APOBEC3G-204ENST00000480000 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
APOBEC3G-204ENST00000480000 MYO15BQ96JP2 1530 aa26.91■■□□□ 1.9
APOBEC3G-204ENST00000480000 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
APOBEC3G-204ENST00000480000 PABPN1Q86U42 306 aaKnown RBP eCLIP26.73■■□□□ 1.87
APOBEC3G-204ENST00000480000 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
APOBEC3G-204ENST00000480000 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
APOBEC3G-204ENST00000480000 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
APOBEC3G-204ENST00000480000 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
APOBEC3G-204ENST00000480000 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
APOBEC3G-204ENST00000480000 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
APOBEC3G-204ENST00000480000 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
APOBEC3G-204ENST00000480000 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
APOBEC3G-204ENST00000480000 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
APOBEC3G-204ENST00000480000 NCAPD3P42695 1498 aa25.18■■□□□ 1.62
APOBEC3G-204ENST00000480000 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
APOBEC3G-204ENST00000480000 SMARCA4P51532 1647 aa24.96■■□□□ 1.59
APOBEC3G-204ENST00000480000 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
APOBEC3G-204ENST00000480000 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
APOBEC3G-204ENST00000480000 DNAJC5Q9H3Z4 198 aa24.86■■□□□ 1.57
APOBEC3G-204ENST00000480000 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
APOBEC3G-204ENST00000480000 PEG3Q9GZU2 1588 aa24.81■■□□□ 1.56
APOBEC3G-204ENST00000480000 CUX2O14529 1486 aa24.78■■□□□ 1.56
APOBEC3G-204ENST00000480000 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.55
APOBEC3G-204ENST00000480000 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
APOBEC3G-204ENST00000480000 MROH2BQ7Z745 1585 aa24.69■■□□□ 1.54
APOBEC3G-204ENST00000480000 NESP48681 1621 aa24.68■■□□□ 1.54
APOBEC3G-204ENST00000480000 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
APOBEC3G-204ENST00000480000 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
APOBEC3G-204ENST00000480000 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
APOBEC3G-204ENST00000480000 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
APOBEC3G-204ENST00000480000 WIZO95785 1651 aa24.34■■□□□ 1.49
APOBEC3G-204ENST00000480000 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
APOBEC3G-204ENST00000480000 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
APOBEC3G-204ENST00000480000 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
APOBEC3G-204ENST00000480000 WDR62O43379 1518 aa24.12■■□□□ 1.45
APOBEC3G-204ENST00000480000 CFTRP13569 1480 aa24.1■■□□□ 1.45
APOBEC3G-204ENST00000480000 TOP2AP11388 1531 aaKnown RBP24.05■■□□□ 1.44
APOBEC3G-204ENST00000480000 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
APOBEC3G-204ENST00000480000 CEP164Q9UPV0 1460 aa24.01■■□□□ 1.43
APOBEC3G-204ENST00000480000 URB2Q14146 1524 aaKnown RBP23.85■■□□□ 1.41
APOBEC3G-204ENST00000480000 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
APOBEC3G-204ENST00000480000 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
APOBEC3G-204ENST00000480000 OSCARQ8IYS5 282 aa23.66■■□□□ 1.38
APOBEC3G-204ENST00000480000 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
APOBEC3G-204ENST00000480000 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
APOBEC3G-204ENST00000480000 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
APOBEC3G-204ENST00000480000 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
APOBEC3G-204ENST00000480000 TRIM41Q8WV44 630 aa23.55■■□□□ 1.36
APOBEC3G-204ENST00000480000 DNMBPQ6XZF7 1577 aa23.47■■□□□ 1.35
APOBEC3G-204ENST00000480000 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
APOBEC3G-204ENST00000480000 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
APOBEC3G-204ENST00000480000 POLA1P09884 1462 aaPredicted RBP23.35■■□□□ 1.33
APOBEC3G-204ENST00000480000 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.33
APOBEC3G-204ENST00000480000 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
APOBEC3G-204ENST00000480000 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
APOBEC3G-204ENST00000480000 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
APOBEC3G-204ENST00000480000 RAD54L2Q9Y4B4 1467 aa23.25■■□□□ 1.31
APOBEC3G-204ENST00000480000 ARHGEF11O15085 1522 aa23.24■■□□□ 1.31
APOBEC3G-204ENST00000480000 SOGA1O94964 1423 aa23.24■■□□□ 1.31
APOBEC3G-204ENST00000480000 CUX1P39880 1505 aa23.18■■□□□ 1.3
APOBEC3G-204ENST00000480000 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
APOBEC3G-204ENST00000480000 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
APOBEC3G-204ENST00000480000 CHD1O14646 1710 aa23.16■■□□□ 1.3
APOBEC3G-204ENST00000480000 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
APOBEC3G-204ENST00000480000 FBLN2P98095 1184 aa23.07■■□□□ 1.28
APOBEC3G-204ENST00000480000 CYB5RLQ6IPT4 315 aa23.07■■□□□ 1.28
APOBEC3G-204ENST00000480000 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
APOBEC3G-204ENST00000480000 GRIN2BQ13224 1484 aa23.03■■□□□ 1.28
APOBEC3G-204ENST00000480000 ARAP1Q96P48 1450 aa23.03■■□□□ 1.28
APOBEC3G-204ENST00000480000 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
APOBEC3G-204ENST00000480000 CLASP1Q7Z460 1538 aa23■■□□□ 1.27
APOBEC3G-204ENST00000480000 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
APOBEC3G-204ENST00000480000 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
APOBEC3G-204ENST00000480000 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
APOBEC3G-204ENST00000480000 ABCA10Q8WWZ4 1543 aa22.96■■□□□ 1.27
APOBEC3G-204ENST00000480000 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
APOBEC3G-204ENST00000480000 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
APOBEC3G-204ENST00000480000 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
APOBEC3G-204ENST00000480000 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
APOBEC3G-204ENST00000480000 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
APOBEC3G-204ENST00000480000 TOP2BQ02880 1626 aa22.8■■□□□ 1.24
APOBEC3G-204ENST00000480000 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
APOBEC3G-204ENST00000480000 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
APOBEC3G-204ENST00000480000 NUP160Q12769 1436 aa22.72■■□□□ 1.23
APOBEC3G-204ENST00000480000 TRHP20396 242 aaPredicted RBP22.71■■□□□ 1.23
APOBEC3G-204ENST00000480000 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
APOBEC3G-204ENST00000480000 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
APOBEC3G-204ENST00000480000 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
APOBEC3G-204ENST00000480000 CEP170Q5SW79 1584 aa22.64■■□□□ 1.22
APOBEC3G-204ENST00000480000 ERCC6L2Q5T890 1561 aa22.62■■□□□ 1.21
APOBEC3G-204ENST00000480000 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
APOBEC3G-204ENST00000480000 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
APOBEC3G-204ENST00000480000 IGF1RP08069 1367 aa22.43■■□□□ 1.18
APOBEC3G-204ENST00000480000 PRG4Q92954 1404 aaPredicted RBP22.42■■□□□ 1.18
APOBEC3G-204ENST00000480000 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms