RNA–Protein interactions for RNA: ENST00000479923.1

EFCAB2-210, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2

Gene EFCAB2, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-210ENST00000479923 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
EFCAB2-210ENST00000479923 ABCC9O60706 1549 aa33.08■■■□□ 2.89
EFCAB2-210ENST00000479923 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
EFCAB2-210ENST00000479923 DCAF8L2P0C7V8 631 aa31.36■■■□□ 2.61
EFCAB2-210ENST00000479923 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
EFCAB2-210ENST00000479923 NACADO15069 1562 aa31.15■■■□□ 2.58
EFCAB2-210ENST00000479923 DNAJC5BQ9UF47 199 aa30.95■■■□□ 2.55
EFCAB2-210ENST00000479923 PABPN1Q86U42 306 aaKnown RBP eCLIP30.92■■■□□ 2.54
EFCAB2-210ENST00000479923 UNC13AQ9UPW8 1703 aa30.71■■■□□ 2.51
EFCAB2-210ENST00000479923 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
EFCAB2-210ENST00000479923 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
EFCAB2-210ENST00000479923 BICRAQ9NZM4 1560 aa30.56■■■□□ 2.48
EFCAB2-210ENST00000479923 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
EFCAB2-210ENST00000479923 SCRIBQ14160 1630 aa30.31■■■□□ 2.44
EFCAB2-210ENST00000479923 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
EFCAB2-210ENST00000479923 CC2D2AQ9P2K1 1620 aa29.79■■■□□ 2.36
EFCAB2-210ENST00000479923 EIF4G1Q04637 1599 aaKnown RBP29.75■■■□□ 2.35
EFCAB2-210ENST00000479923 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
EFCAB2-210ENST00000479923 ATAD2BQ9ULI0 1458 aa28.83■■■□□ 2.21
EFCAB2-210ENST00000479923 SMARCA4P51532 1647 aa28.82■■■□□ 2.2
EFCAB2-210ENST00000479923 NCAPD3P42695 1498 aa28.81■■■□□ 2.2
EFCAB2-210ENST00000479923 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
EFCAB2-210ENST00000479923 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
EFCAB2-210ENST00000479923 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
EFCAB2-210ENST00000479923 HMGXB3Q12766 1538 aa28.58■■■□□ 2.17
EFCAB2-210ENST00000479923 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
EFCAB2-210ENST00000479923 NESP48681 1621 aa28.51■■■□□ 2.15
EFCAB2-210ENST00000479923 ERCC6Q03468 1493 aa28.44■■■□□ 2.14
EFCAB2-210ENST00000479923 PEG3Q9GZU2 1588 aa28.43■■■□□ 2.14
EFCAB2-210ENST00000479923 WIZO95785 1651 aa28.28■■■□□ 2.12
EFCAB2-210ENST00000479923 CUX2O14529 1486 aa28.21■■■□□ 2.11
EFCAB2-210ENST00000479923 DNAJC5Q9H3Z4 198 aa28.08■■■□□ 2.09
EFCAB2-210ENST00000479923 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
EFCAB2-210ENST00000479923 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
EFCAB2-210ENST00000479923 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
EFCAB2-210ENST00000479923 KIF21AQ7Z4S6 1674 aa28.02■■■□□ 2.08
EFCAB2-210ENST00000479923 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
EFCAB2-210ENST00000479923 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
EFCAB2-210ENST00000479923 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.05
EFCAB2-210ENST00000479923 MRC2Q9UBG0 1479 aa27.76■■■□□ 2.03
EFCAB2-210ENST00000479923 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.03
EFCAB2-210ENST00000479923 CFTRP13569 1480 aa27.7■■■□□ 2.02
EFCAB2-210ENST00000479923 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
EFCAB2-210ENST00000479923 WDR62O43379 1518 aa27.66■■■□□ 2.02
EFCAB2-210ENST00000479923 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
EFCAB2-210ENST00000479923 URB2Q14146 1524 aaKnown RBP27.51■■■□□ 2
EFCAB2-210ENST00000479923 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
EFCAB2-210ENST00000479923 TOPBP1Q92547 1522 aa27.21■■□□□ 1.95
EFCAB2-210ENST00000479923 ZNF608Q9ULD9 1512 aaPredicted RBP27.2■■□□□ 1.94
EFCAB2-210ENST00000479923 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
EFCAB2-210ENST00000479923 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
EFCAB2-210ENST00000479923 IFT140Q96RY7 1462 aa27.08■■□□□ 1.93
EFCAB2-210ENST00000479923 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
EFCAB2-210ENST00000479923 OSCARQ8IYS5 282 aa27.02■■□□□ 1.92
EFCAB2-210ENST00000479923 ABCC8Q09428 1581 aa26.97■■□□□ 1.91
EFCAB2-210ENST00000479923 AQRO60306 1485 aaKnown RBP eCLIP26.96■■□□□ 1.91
EFCAB2-210ENST00000479923 POLA1P09884 1462 aaPredicted RBP26.95■■□□□ 1.91
EFCAB2-210ENST00000479923 RAD54L2Q9Y4B4 1467 aa26.95■■□□□ 1.91
EFCAB2-210ENST00000479923 EIF4G3O43432 1585 aaKnown RBP26.95■■□□□ 1.9
EFCAB2-210ENST00000479923 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
EFCAB2-210ENST00000479923 CUX1P39880 1505 aa26.86■■□□□ 1.89
EFCAB2-210ENST00000479923 TDRD9Q8NDG6 1382 aaKnown RBP26.84■■□□□ 1.89
EFCAB2-210ENST00000479923 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
EFCAB2-210ENST00000479923 SOGA1O94964 1423 aa26.82■■□□□ 1.88
EFCAB2-210ENST00000479923 FBLN2P98095 1184 aa26.77■■□□□ 1.88
EFCAB2-210ENST00000479923 CHD1O14646 1710 aa26.71■■□□□ 1.87
EFCAB2-210ENST00000479923 RIMBP3CA6NJZ7 1639 aa26.7■■□□□ 1.86
EFCAB2-210ENST00000479923 RIMBP3BA6NNM3 1639 aa26.7■■□□□ 1.86
EFCAB2-210ENST00000479923 RIMBP3Q9UFD9 1639 aa26.7■■□□□ 1.86
EFCAB2-210ENST00000479923 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
EFCAB2-210ENST00000479923 ARHGEF11O15085 1522 aa26.64■■□□□ 1.85
EFCAB2-210ENST00000479923 WDR97A6NE52 1622 aa26.54■■□□□ 1.84
EFCAB2-210ENST00000479923 GRIN2BQ13224 1484 aa26.51■■□□□ 1.83
EFCAB2-210ENST00000479923 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
EFCAB2-210ENST00000479923 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
EFCAB2-210ENST00000479923 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
EFCAB2-210ENST00000479923 SYNJ1O43426 1573 aa26.47■■□□□ 1.83
EFCAB2-210ENST00000479923 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
EFCAB2-210ENST00000479923 MAGI1Q96QZ7 1491 aaPredicted RBP26.44■■□□□ 1.82
EFCAB2-210ENST00000479923 ARAP1Q96P48 1450 aa26.43■■□□□ 1.82
EFCAB2-210ENST00000479923 WRNQ14191 1432 aaPredicted RBP eCLIP26.43■■□□□ 1.82
EFCAB2-210ENST00000479923 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
EFCAB2-210ENST00000479923 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
EFCAB2-210ENST00000479923 SYNJ2O15056 1496 aa26.4■■□□□ 1.82
EFCAB2-210ENST00000479923 CLASP1Q7Z460 1538 aa26.39■■□□□ 1.82
EFCAB2-210ENST00000479923 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
EFCAB2-210ENST00000479923 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
EFCAB2-210ENST00000479923 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
EFCAB2-210ENST00000479923 GRIN2AQ12879 1464 aa26.21■■□□□ 1.79
EFCAB2-210ENST00000479923 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
EFCAB2-210ENST00000479923 CEP170Q5SW79 1584 aa26.16■■□□□ 1.78
EFCAB2-210ENST00000479923 TRHP20396 242 aaPredicted RBP26.14■■□□□ 1.78
EFCAB2-210ENST00000479923 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
EFCAB2-210ENST00000479923 NUP160Q12769 1436 aa26.09■■□□□ 1.77
EFCAB2-210ENST00000479923 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
EFCAB2-210ENST00000479923 IGF1RP08069 1367 aa25.92■■□□□ 1.74
EFCAB2-210ENST00000479923 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
EFCAB2-210ENST00000479923 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
EFCAB2-210ENST00000479923 KIF27Q86VH2 1401 aa25.87■■□□□ 1.73
EFCAB2-210ENST00000479923 JPH4Q96JJ6 628 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms