RNA–Protein interactions for RNA: ENST00000479916.1

AP4M1-215, Transcript of adaptor related protein complex 4 subunit mu 1, humanhuman

TSL 3

Gene AP4M1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1-215ENST00000479916 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
AP4M1-215ENST00000479916 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
AP4M1-215ENST00000479916 ABCC9O60706 1549 aa19.31■□□□□ 0.68
AP4M1-215ENST00000479916 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
AP4M1-215ENST00000479916 NACADO15069 1562 aa18.25■□□□□ 0.51
AP4M1-215ENST00000479916 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
AP4M1-215ENST00000479916 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
AP4M1-215ENST00000479916 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
AP4M1-215ENST00000479916 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
AP4M1-215ENST00000479916 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
AP4M1-215ENST00000479916 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
AP4M1-215ENST00000479916 ZCCHC6Q5VYS8 1495 aaKnown RBP17.87■□□□□ 0.45
AP4M1-215ENST00000479916 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
AP4M1-215ENST00000479916 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
AP4M1-215ENST00000479916 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
AP4M1-215ENST00000479916 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
AP4M1-215ENST00000479916 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
AP4M1-215ENST00000479916 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
AP4M1-215ENST00000479916 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
AP4M1-215ENST00000479916 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
AP4M1-215ENST00000479916 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
AP4M1-215ENST00000479916 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
AP4M1-215ENST00000479916 HMGXB3Q12766 1538 aa16.72■□□□□ 0.27
AP4M1-215ENST00000479916 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
AP4M1-215ENST00000479916 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
AP4M1-215ENST00000479916 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
AP4M1-215ENST00000479916 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
AP4M1-215ENST00000479916 NESP48681 1621 aa16.63■□□□□ 0.25
AP4M1-215ENST00000479916 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
AP4M1-215ENST00000479916 CUX2O14529 1486 aa16.57■□□□□ 0.24
AP4M1-215ENST00000479916 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
AP4M1-215ENST00000479916 WIZO95785 1651 aa16.48■□□□□ 0.23
AP4M1-215ENST00000479916 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
AP4M1-215ENST00000479916 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
AP4M1-215ENST00000479916 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
AP4M1-215ENST00000479916 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
AP4M1-215ENST00000479916 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
AP4M1-215ENST00000479916 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
AP4M1-215ENST00000479916 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
AP4M1-215ENST00000479916 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
AP4M1-215ENST00000479916 WDR62O43379 1518 aa16.19■□□□□ 0.18
AP4M1-215ENST00000479916 CFTRP13569 1480 aa16.16■□□□□ 0.18
AP4M1-215ENST00000479916 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
AP4M1-215ENST00000479916 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
AP4M1-215ENST00000479916 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
AP4M1-215ENST00000479916 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
AP4M1-215ENST00000479916 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
AP4M1-215ENST00000479916 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
AP4M1-215ENST00000479916 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
AP4M1-215ENST00000479916 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
AP4M1-215ENST00000479916 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
AP4M1-215ENST00000479916 IFT140Q96RY7 1462 aa15.82■□□□□ 0.12
AP4M1-215ENST00000479916 DNMBPQ6XZF7 1577 aa15.81■□□□□ 0.12
AP4M1-215ENST00000479916 ABCC8Q09428 1581 aa15.78■□□□□ 0.12
AP4M1-215ENST00000479916 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
AP4M1-215ENST00000479916 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
AP4M1-215ENST00000479916 AQRO60306 1485 aaKnown RBP eCLIP15.7■□□□□ 0.1
AP4M1-215ENST00000479916 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
AP4M1-215ENST00000479916 CHD1O14646 1710 aa15.69■□□□□ 0.1
AP4M1-215ENST00000479916 RIMBP3CA6NJZ7 1639 aa15.68■□□□□ 0.1
AP4M1-215ENST00000479916 RIMBP3BA6NNM3 1639 aa15.68■□□□□ 0.1
AP4M1-215ENST00000479916 RIMBP3Q9UFD9 1639 aa15.68■□□□□ 0.1
AP4M1-215ENST00000479916 RAD54L2Q9Y4B4 1467 aa15.67■□□□□ 0.1
AP4M1-215ENST00000479916 CUX1P39880 1505 aa15.63■□□□□ 0.09
AP4M1-215ENST00000479916 FGD5Q6ZNL6 1462 aa15.62■□□□□ 0.09
AP4M1-215ENST00000479916 SOGA1O94964 1423 aa15.61■□□□□ 0.09
AP4M1-215ENST00000479916 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
AP4M1-215ENST00000479916 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
AP4M1-215ENST00000479916 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
AP4M1-215ENST00000479916 FBLN2P98095 1184 aa15.56■□□□□ 0.08
AP4M1-215ENST00000479916 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
AP4M1-215ENST00000479916 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
AP4M1-215ENST00000479916 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
AP4M1-215ENST00000479916 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
AP4M1-215ENST00000479916 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
AP4M1-215ENST00000479916 ARAP1Q96P48 1450 aa15.46■□□□□ 0.07
AP4M1-215ENST00000479916 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.06
AP4M1-215ENST00000479916 CLASP1Q7Z460 1538 aa15.45■□□□□ 0.06
AP4M1-215ENST00000479916 ABCA5Q8WWZ7 1642 aa15.43■□□□□ 0.06
AP4M1-215ENST00000479916 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
AP4M1-215ENST00000479916 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
AP4M1-215ENST00000479916 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
AP4M1-215ENST00000479916 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
AP4M1-215ENST00000479916 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
AP4M1-215ENST00000479916 BIVM-ERCC5R4GMW8 1640 aa15.39■□□□□ 0.05
AP4M1-215ENST00000479916 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
AP4M1-215ENST00000479916 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
AP4M1-215ENST00000479916 ADAMTS12P58397 1594 aa15.3■□□□□ 0.04
AP4M1-215ENST00000479916 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
AP4M1-215ENST00000479916 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
AP4M1-215ENST00000479916 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
AP4M1-215ENST00000479916 ERCC6L2Q5T890 1561 aa15.26■□□□□ 0.03
AP4M1-215ENST00000479916 NUP160Q12769 1436 aa15.23■□□□□ 0.03
AP4M1-215ENST00000479916 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
AP4M1-215ENST00000479916 FHAD1B1AJZ9 1412 aa15.22■□□□□ 0.03
AP4M1-215ENST00000479916 SHROOM2Q13796 1616 aa15.19■□□□□ 0.02
AP4M1-215ENST00000479916 RUSC2Q8N2Y8 1516 aa15.08■□□□□ 0.01
AP4M1-215ENST00000479916 PRG4Q92954 1404 aaPredicted RBP15.08■□□□□ 0
AP4M1-215ENST00000479916 JPH4Q96JJ6 628 aa15.07■□□□□ 0
AP4M1-215ENST00000479916 IGF1RP08069 1367 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms