RNA–Protein interactions for RNA: ENST00000479904.1

BARD1-208, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 4

Gene BARD1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-208ENST00000479904 NISCHQ9Y2I1 1504 aa45.56■■■■■ 4.88
BARD1-208ENST00000479904 CCDC180Q9P1Z9 1646 aa40.83■■■■■ 4.13
BARD1-208ENST00000479904 ABCC9O60706 1549 aa40.7■■■■■ 4.11
BARD1-208ENST00000479904 RB1CC1Q8TDY2 1594 aa38.78■■■■□ 3.8
BARD1-208ENST00000479904 NACADO15069 1562 aa38.54■■■■□ 3.76
BARD1-208ENST00000479904 DCAF8L2P0C7V8 631 aa38.41■■■■□ 3.74
BARD1-208ENST00000479904 DNAJC5BQ9UF47 199 aa38.03■■■■□ 3.68
BARD1-208ENST00000479904 MYO15BQ96JP2 1530 aa38.02■■■■□ 3.68
BARD1-208ENST00000479904 UNC13AQ9UPW8 1703 aa37.98■■■■□ 3.67
BARD1-208ENST00000479904 PABPN1Q86U42 306 aaKnown RBP eCLIP37.91■■■■□ 3.66
BARD1-208ENST00000479904 ZCCHC6Q5VYS8 1495 aaKnown RBP37.8■■■■□ 3.64
BARD1-208ENST00000479904 BICRAQ9NZM4 1560 aa37.67■■■■□ 3.62
BARD1-208ENST00000479904 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
BARD1-208ENST00000479904 SCRIBQ14160 1630 aa37.25■■■■□ 3.55
BARD1-208ENST00000479904 SHROOM4Q9ULL8 1493 aa37.1■■■■□ 3.53
BARD1-208ENST00000479904 CC2D2AQ9P2K1 1620 aa36.77■■■■□ 3.48
BARD1-208ENST00000479904 EIF4G1Q04637 1599 aaKnown RBP36.72■■■■□ 3.47
BARD1-208ENST00000479904 CECR2Q9BXF3 1484 aa36.62■■■■□ 3.45
BARD1-208ENST00000479904 NCAPD3P42695 1498 aa35.56■■■■□ 3.28
BARD1-208ENST00000479904 SMARCA4P51532 1647 aa35.54■■■■□ 3.28
BARD1-208ENST00000479904 ATAD2BQ9ULI0 1458 aa35.5■■■■□ 3.27
BARD1-208ENST00000479904 SMARCA2P51531 1590 aa35.41■■■■□ 3.26
BARD1-208ENST00000479904 BAZ1AQ9NRL2 1556 aaPredicted RBP35.36■■■■□ 3.25
BARD1-208ENST00000479904 HMGXB3Q12766 1538 aa35.33■■■■□ 3.25
BARD1-208ENST00000479904 BAZ1BQ9UIG0 1483 aaKnown RBP35.17■■■■□ 3.22
BARD1-208ENST00000479904 PEG3Q9GZU2 1588 aa35.15■■■■□ 3.22
BARD1-208ENST00000479904 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
BARD1-208ENST00000479904 ERCC6Q03468 1493 aa35.11■■■■□ 3.21
BARD1-208ENST00000479904 NESP48681 1621 aa35.02■■■■□ 3.2
BARD1-208ENST00000479904 CUX2O14529 1486 aa34.96■■■■□ 3.19
BARD1-208ENST00000479904 LAMC3Q9Y6N6 1575 aa34.76■■■■□ 3.16
BARD1-208ENST00000479904 DNAJC5Q9H3Z4 198 aa34.76■■■■□ 3.16
BARD1-208ENST00000479904 WIZO95785 1651 aa34.75■■■■□ 3.15
BARD1-208ENST00000479904 THOC2Q8NI27 1593 aaKnown RBP34.62■■■■□ 3.13
BARD1-208ENST00000479904 KIF21AQ7Z4S6 1674 aa34.6■■■■□ 3.13
BARD1-208ENST00000479904 PDS5BQ9NTI5 1447 aa34.53■■■■□ 3.12
BARD1-208ENST00000479904 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
BARD1-208ENST00000479904 RSF1Q96T23 1441 aaPredicted RBP34.44■■■■□ 3.1
BARD1-208ENST00000479904 TOP2AP11388 1531 aaKnown RBP34.28■■■■□ 3.08
BARD1-208ENST00000479904 MRC2Q9UBG0 1479 aa34.26■■■■□ 3.07
BARD1-208ENST00000479904 WDR62O43379 1518 aa34.17■■■■□ 3.06
BARD1-208ENST00000479904 CEP164Q9UPV0 1460 aa34.15■■■■□ 3.06
BARD1-208ENST00000479904 CFTRP13569 1480 aa34.14■■■■□ 3.06
BARD1-208ENST00000479904 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
BARD1-208ENST00000479904 CCDC88BA6NC98 1476 aa33.89■■■■□ 3.02
BARD1-208ENST00000479904 PRDM2Q13029 1718 aa33.88■■■■□ 3.01
BARD1-208ENST00000479904 URB2Q14146 1524 aaKnown RBP33.85■■■■□ 3.01
BARD1-208ENST00000479904 TOPBP1Q92547 1522 aa33.51■■■□□ 2.95
BARD1-208ENST00000479904 IFT140Q96RY7 1462 aa33.44■■■□□ 2.94
BARD1-208ENST00000479904 ZNF608Q9ULD9 1512 aaPredicted RBP33.42■■■□□ 2.94
BARD1-208ENST00000479904 ABCC8Q09428 1581 aa33.4■■■□□ 2.94
BARD1-208ENST00000479904 DNMBPQ6XZF7 1577 aa33.4■■■□□ 2.94
BARD1-208ENST00000479904 OSCARQ8IYS5 282 aa33.38■■■□□ 2.93
BARD1-208ENST00000479904 TRIM41Q8WV44 630 aa33.35■■■□□ 2.93
BARD1-208ENST00000479904 EIF4G3O43432 1585 aaKnown RBP33.25■■■□□ 2.91
BARD1-208ENST00000479904 TARBP1Q13395 1621 aaKnown RBP33.21■■■□□ 2.91
BARD1-208ENST00000479904 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
BARD1-208ENST00000479904 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.89
BARD1-208ENST00000479904 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
BARD1-208ENST00000479904 RAD54L2Q9Y4B4 1467 aa33.06■■■□□ 2.88
BARD1-208ENST00000479904 SOGA1O94964 1423 aa33.02■■■□□ 2.88
BARD1-208ENST00000479904 FGD5Q6ZNL6 1462 aa33■■■□□ 2.87
BARD1-208ENST00000479904 CHD1O14646 1710 aa33■■■□□ 2.87
BARD1-208ENST00000479904 CUX1P39880 1505 aa33■■■□□ 2.87
BARD1-208ENST00000479904 RIMBP3CA6NJZ7 1639 aa32.99■■■□□ 2.87
BARD1-208ENST00000479904 RIMBP3BA6NNM3 1639 aa32.99■■■□□ 2.87
BARD1-208ENST00000479904 RIMBP3Q9UFD9 1639 aa32.99■■■□□ 2.87
BARD1-208ENST00000479904 TDRD9Q8NDG6 1382 aaKnown RBP32.95■■■□□ 2.86
BARD1-208ENST00000479904 ARHGEF11O15085 1522 aa32.89■■■□□ 2.86
BARD1-208ENST00000479904 FBLN2P98095 1184 aa32.88■■■□□ 2.85
BARD1-208ENST00000479904 WDR97A6NE52 1622 aa32.84■■■□□ 2.85
BARD1-208ENST00000479904 SNAPC4Q5SXM2 1469 aa32.79■■■□□ 2.84
BARD1-208ENST00000479904 GRIN2BQ13224 1484 aa32.71■■■□□ 2.83
BARD1-208ENST00000479904 MAGI1Q96QZ7 1491 aaPredicted RBP32.68■■■□□ 2.82
BARD1-208ENST00000479904 PBRM1Q86U86 1689 aa32.65■■■□□ 2.82
BARD1-208ENST00000479904 CYB5RLQ6IPT4 315 aa32.63■■■□□ 2.81
BARD1-208ENST00000479904 CHMP7Q8WUX9 453 aaPredicted RBP32.63■■■□□ 2.81
BARD1-208ENST00000479904 GAPVD1Q14C86 1478 aa32.62■■■□□ 2.81
BARD1-208ENST00000479904 ABCA10Q8WWZ4 1543 aa32.61■■■□□ 2.81
BARD1-208ENST00000479904 CLASP1Q7Z460 1538 aa32.58■■■□□ 2.81
BARD1-208ENST00000479904 SYNJ2O15056 1496 aa32.58■■■□□ 2.81
BARD1-208ENST00000479904 ARAP1Q96P48 1450 aa32.58■■■□□ 2.81
BARD1-208ENST00000479904 ABCA5Q8WWZ7 1642 aa32.58■■■□□ 2.81
BARD1-208ENST00000479904 SYNJ1O43426 1573 aa32.57■■■□□ 2.8
BARD1-208ENST00000479904 BIVM-ERCC5R4GMW8 1640 aa32.51■■■□□ 2.8
BARD1-208ENST00000479904 TOP2BQ02880 1626 aa32.51■■■□□ 2.79
BARD1-208ENST00000479904 WRNQ14191 1432 aaPredicted RBP eCLIP32.51■■■□□ 2.79
BARD1-208ENST00000479904 ADAMTS12P58397 1594 aa32.32■■■□□ 2.77
BARD1-208ENST00000479904 GRIN2AQ12879 1464 aa32.3■■■□□ 2.76
BARD1-208ENST00000479904 TRHP20396 242 aaPredicted RBP32.22■■■□□ 2.75
BARD1-208ENST00000479904 CEP170Q5SW79 1584 aa32.2■■■□□ 2.75
BARD1-208ENST00000479904 FHAD1B1AJZ9 1412 aa32.2■■■□□ 2.75
BARD1-208ENST00000479904 ERICH3Q5RHP9 1530 aa32.2■■■□□ 2.74
BARD1-208ENST00000479904 NUP160Q12769 1436 aa32.17■■■□□ 2.74
BARD1-208ENST00000479904 ERCC6L2Q5T890 1561 aa32.12■■■□□ 2.73
BARD1-208ENST00000479904 SHROOM2Q13796 1616 aa32.04■■■□□ 2.72
BARD1-208ENST00000479904 RUSC2Q8N2Y8 1516 aa31.87■■■□□ 2.69
BARD1-208ENST00000479904 PRG4Q92954 1404 aaPredicted RBP31.86■■■□□ 2.69
BARD1-208ENST00000479904 KIF27Q86VH2 1401 aa31.85■■■□□ 2.69
BARD1-208ENST00000479904 JPH4Q96JJ6 628 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms