RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 NISCHQ9Y2I1 1504 aa38.13■■■■□ 3.69
SEMA6C-206ENST00000479820 CCDC180Q9P1Z9 1646 aa34.24■■■■□ 3.07
SEMA6C-206ENST00000479820 ABCC9O60706 1549 aa33.67■■■□□ 2.98
SEMA6C-206ENST00000479820 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.76
SEMA6C-206ENST00000479820 NACADO15069 1562 aa32.19■■■□□ 2.74
SEMA6C-206ENST00000479820 MYO15BQ96JP2 1530 aa31.93■■■□□ 2.7
SEMA6C-206ENST00000479820 UNC13AQ9UPW8 1703 aa31.74■■■□□ 2.67
SEMA6C-206ENST00000479820 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
SEMA6C-206ENST00000479820 DCAF8L2P0C7V8 631 aa31.68■■■□□ 2.66
SEMA6C-206ENST00000479820 DCAF1Q9Y4B6 1507 aa31.61■■■□□ 2.65
SEMA6C-206ENST00000479820 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
SEMA6C-206ENST00000479820 DNAJC5BQ9UF47 199 aa31.28■■■□□ 2.6
SEMA6C-206ENST00000479820 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
SEMA6C-206ENST00000479820 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
SEMA6C-206ENST00000479820 SCRIBQ14160 1630 aa31.05■■■□□ 2.56
SEMA6C-206ENST00000479820 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
SEMA6C-206ENST00000479820 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
SEMA6C-206ENST00000479820 CECR2Q9BXF3 1484 aa30.34■■■□□ 2.45
SEMA6C-206ENST00000479820 SMARCA4P51532 1647 aa29.73■■■□□ 2.35
SEMA6C-206ENST00000479820 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
SEMA6C-206ENST00000479820 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
SEMA6C-206ENST00000479820 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
SEMA6C-206ENST00000479820 BAZ1AQ9NRL2 1556 aaPredicted RBP29.59■■■□□ 2.33
SEMA6C-206ENST00000479820 HMGXB3Q12766 1538 aa29.56■■■□□ 2.32
SEMA6C-206ENST00000479820 PEG3Q9GZU2 1588 aa29.51■■■□□ 2.31
SEMA6C-206ENST00000479820 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
SEMA6C-206ENST00000479820 BAZ1BQ9UIG0 1483 aaKnown RBP29.31■■■□□ 2.28
SEMA6C-206ENST00000479820 WIZO95785 1651 aa29.05■■■□□ 2.24
SEMA6C-206ENST00000479820 NESP48681 1621 aa29.05■■■□□ 2.24
SEMA6C-206ENST00000479820 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
SEMA6C-206ENST00000479820 CUX2O14529 1486 aa29.01■■■□□ 2.23
SEMA6C-206ENST00000479820 LAMC3Q9Y6N6 1575 aa29■■■□□ 2.23
SEMA6C-206ENST00000479820 THOC2Q8NI27 1593 aaKnown RBP28.85■■■□□ 2.21
SEMA6C-206ENST00000479820 RSF1Q96T23 1441 aaPredicted RBP28.83■■■□□ 2.21
SEMA6C-206ENST00000479820 KIF21AQ7Z4S6 1674 aa28.83■■■□□ 2.21
SEMA6C-206ENST00000479820 TOP2AP11388 1531 aaKnown RBP28.73■■■□□ 2.19
SEMA6C-206ENST00000479820 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
SEMA6C-206ENST00000479820 PDS5BQ9NTI5 1447 aa28.71■■■□□ 2.19
SEMA6C-206ENST00000479820 CFTRP13569 1480 aa28.53■■■□□ 2.16
SEMA6C-206ENST00000479820 DNAJC5Q9H3Z4 198 aa28.52■■■□□ 2.16
SEMA6C-206ENST00000479820 MRC2Q9UBG0 1479 aa28.49■■■□□ 2.15
SEMA6C-206ENST00000479820 WDR62O43379 1518 aa28.48■■■□□ 2.15
SEMA6C-206ENST00000479820 PRDM2Q13029 1718 aa28.47■■■□□ 2.15
SEMA6C-206ENST00000479820 CEP164Q9UPV0 1460 aa28.42■■■□□ 2.14
SEMA6C-206ENST00000479820 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
SEMA6C-206ENST00000479820 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
SEMA6C-206ENST00000479820 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
SEMA6C-206ENST00000479820 TOPBP1Q92547 1522 aa27.94■■■□□ 2.06
SEMA6C-206ENST00000479820 DNMBPQ6XZF7 1577 aa27.91■■■□□ 2.06
SEMA6C-206ENST00000479820 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
SEMA6C-206ENST00000479820 IFT140Q96RY7 1462 aa27.85■■■□□ 2.05
SEMA6C-206ENST00000479820 ZNF608Q9ULD9 1512 aaPredicted RBP27.76■■■□□ 2.03
SEMA6C-206ENST00000479820 TARBP1Q13395 1621 aaKnown RBP27.74■■■□□ 2.03
SEMA6C-206ENST00000479820 EIF4G3O43432 1585 aaKnown RBP27.72■■■□□ 2.03
SEMA6C-206ENST00000479820 POLA1P09884 1462 aaPredicted RBP27.68■■■□□ 2.02
SEMA6C-206ENST00000479820 CUX1P39880 1505 aa27.58■■■□□ 2.01
SEMA6C-206ENST00000479820 OSCARQ8IYS5 282 aa27.55■■■□□ 2
SEMA6C-206ENST00000479820 WDR97A6NE52 1622 aa27.55■■■□□ 2
SEMA6C-206ENST00000479820 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
SEMA6C-206ENST00000479820 FGD5Q6ZNL6 1462 aa27.52■■■□□ 2
SEMA6C-206ENST00000479820 RAD54L2Q9Y4B4 1467 aa27.5■■□□□ 1.99
SEMA6C-206ENST00000479820 CHD1O14646 1710 aa27.49■■□□□ 1.99
SEMA6C-206ENST00000479820 AQRO60306 1485 aaKnown RBP eCLIP27.49■■□□□ 1.99
SEMA6C-206ENST00000479820 SOGA1O94964 1423 aa27.46■■□□□ 1.99
SEMA6C-206ENST00000479820 RIMBP3CA6NJZ7 1639 aa27.35■■□□□ 1.97
SEMA6C-206ENST00000479820 RIMBP3BA6NNM3 1639 aa27.35■■□□□ 1.97
SEMA6C-206ENST00000479820 RIMBP3Q9UFD9 1639 aa27.35■■□□□ 1.97
SEMA6C-206ENST00000479820 TDRD9Q8NDG6 1382 aaKnown RBP27.33■■□□□ 1.97
SEMA6C-206ENST00000479820 BIVM-ERCC5R4GMW8 1640 aa27.32■■□□□ 1.96
SEMA6C-206ENST00000479820 PBRM1Q86U86 1689 aa27.3■■□□□ 1.96
SEMA6C-206ENST00000479820 ABCA5Q8WWZ7 1642 aa27.28■■□□□ 1.96
SEMA6C-206ENST00000479820 ABCA10Q8WWZ4 1543 aa27.27■■□□□ 1.96
SEMA6C-206ENST00000479820 SNAPC4Q5SXM2 1469 aa27.27■■□□□ 1.96
SEMA6C-206ENST00000479820 MAGI1Q96QZ7 1491 aaPredicted RBP27.27■■□□□ 1.96
SEMA6C-206ENST00000479820 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
SEMA6C-206ENST00000479820 ARHGEF11O15085 1522 aa27.26■■□□□ 1.96
SEMA6C-206ENST00000479820 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
SEMA6C-206ENST00000479820 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
SEMA6C-206ENST00000479820 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
SEMA6C-206ENST00000479820 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
SEMA6C-206ENST00000479820 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
SEMA6C-206ENST00000479820 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
SEMA6C-206ENST00000479820 SYNJ2O15056 1496 aa27.14■■□□□ 1.94
SEMA6C-206ENST00000479820 FBLN2P98095 1184 aa27.08■■□□□ 1.93
SEMA6C-206ENST00000479820 ADAMTS12P58397 1594 aa27.02■■□□□ 1.92
SEMA6C-206ENST00000479820 ARAP1Q96P48 1450 aa27.01■■□□□ 1.91
SEMA6C-206ENST00000479820 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
SEMA6C-206ENST00000479820 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.91
SEMA6C-206ENST00000479820 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
SEMA6C-206ENST00000479820 FHAD1B1AJZ9 1412 aa26.86■■□□□ 1.89
SEMA6C-206ENST00000479820 NUP160Q12769 1436 aa26.85■■□□□ 1.89
SEMA6C-206ENST00000479820 CEP170Q5SW79 1584 aa26.84■■□□□ 1.89
SEMA6C-206ENST00000479820 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
SEMA6C-206ENST00000479820 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
SEMA6C-206ENST00000479820 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
SEMA6C-206ENST00000479820 CUL7Q14999 1698 aa26.66■■□□□ 1.86
SEMA6C-206ENST00000479820 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
SEMA6C-206ENST00000479820 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
SEMA6C-206ENST00000479820 IGF1RP08069 1367 aa26.57■■□□□ 1.84
SEMA6C-206ENST00000479820 PRG4Q92954 1404 aaPredicted RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms