RNA–Protein interactions for RNA: ENST00000479814.5

MMP23B-205, Transcript of matrix metallopeptidase 23B, humanhuman

TSL 5

Gene MMP23B, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP23B-205ENST00000479814 NISCHQ9Y2I1 1504 aa47.58■■■■■ 5.21
MMP23B-205ENST00000479814 CCDC180Q9P1Z9 1646 aa42.53■■■■■ 4.4
MMP23B-205ENST00000479814 ABCC9O60706 1549 aa42.36■■■■■ 4.37
MMP23B-205ENST00000479814 RB1CC1Q8TDY2 1594 aa40.43■■■■■ 4.06
MMP23B-205ENST00000479814 NACADO15069 1562 aa40.22■■■■■ 4.03
MMP23B-205ENST00000479814 DCAF8L2P0C7V8 631 aa40.19■■■■■ 4.02
MMP23B-205ENST00000479814 MYO15BQ96JP2 1530 aa39.75■■■■□ 3.95
MMP23B-205ENST00000479814 DNAJC5BQ9UF47 199 aa39.58■■■■□ 3.93
MMP23B-205ENST00000479814 PABPN1Q86U42 306 aaKnown RBP eCLIP39.54■■■■□ 3.92
MMP23B-205ENST00000479814 ZCCHC6Q5VYS8 1495 aaKnown RBP39.45■■■■□ 3.91
MMP23B-205ENST00000479814 UNC13AQ9UPW8 1703 aa39.39■■■■□ 3.9
MMP23B-205ENST00000479814 DCAF1Q9Y4B6 1507 aa39.31■■■■□ 3.88
MMP23B-205ENST00000479814 BICRAQ9NZM4 1560 aa39.19■■■■□ 3.86
MMP23B-205ENST00000479814 SCRIBQ14160 1630 aa38.78■■■■□ 3.8
MMP23B-205ENST00000479814 SHROOM4Q9ULL8 1493 aa38.74■■■■□ 3.79
MMP23B-205ENST00000479814 CC2D2AQ9P2K1 1620 aa38.25■■■■□ 3.71
MMP23B-205ENST00000479814 EIF4G1Q04637 1599 aaKnown RBP38.23■■■■□ 3.71
MMP23B-205ENST00000479814 CECR2Q9BXF3 1484 aa38.15■■■■□ 3.7
MMP23B-205ENST00000479814 NCAPD3P42695 1498 aa37.15■■■■□ 3.54
MMP23B-205ENST00000479814 ATAD2BQ9ULI0 1458 aa37.05■■■■□ 3.52
MMP23B-205ENST00000479814 SMARCA4P51532 1647 aa37.03■■■■□ 3.52
MMP23B-205ENST00000479814 SMARCA2P51531 1590 aa36.95■■■■□ 3.51
MMP23B-205ENST00000479814 BAZ1AQ9NRL2 1556 aaPredicted RBP36.91■■■■□ 3.5
MMP23B-205ENST00000479814 HMGXB3Q12766 1538 aa36.84■■■■□ 3.49
MMP23B-205ENST00000479814 BAZ1BQ9UIG0 1483 aaKnown RBP36.7■■■■□ 3.47
MMP23B-205ENST00000479814 PEG3Q9GZU2 1588 aa36.67■■■■□ 3.46
MMP23B-205ENST00000479814 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
MMP23B-205ENST00000479814 ERCC6Q03468 1493 aa36.59■■■■□ 3.45
MMP23B-205ENST00000479814 NESP48681 1621 aa36.44■■■■□ 3.42
MMP23B-205ENST00000479814 CUX2O14529 1486 aa36.43■■■■□ 3.42
MMP23B-205ENST00000479814 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
MMP23B-205ENST00000479814 DNAJC5Q9H3Z4 198 aa36.21■■■■□ 3.39
MMP23B-205ENST00000479814 WIZO95785 1651 aa36.19■■■■□ 3.38
MMP23B-205ENST00000479814 PDS5BQ9NTI5 1447 aa36.08■■■■□ 3.37
MMP23B-205ENST00000479814 CADPSQ9ULU8 1353 aa36.05■■■■□ 3.36
MMP23B-205ENST00000479814 RSF1Q96T23 1441 aaPredicted RBP36.01■■■■□ 3.36
MMP23B-205ENST00000479814 THOC2Q8NI27 1593 aaKnown RBP35.98■■■■□ 3.35
MMP23B-205ENST00000479814 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
MMP23B-205ENST00000479814 TOP2AP11388 1531 aaKnown RBP35.78■■■■□ 3.32
MMP23B-205ENST00000479814 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
MMP23B-205ENST00000479814 CFTRP13569 1480 aa35.66■■■■□ 3.3
MMP23B-205ENST00000479814 CEP164Q9UPV0 1460 aa35.61■■■■□ 3.29
MMP23B-205ENST00000479814 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
MMP23B-205ENST00000479814 WDR62O43379 1518 aa35.57■■■■□ 3.29
MMP23B-205ENST00000479814 CCDC88BA6NC98 1476 aa35.41■■■■□ 3.26
MMP23B-205ENST00000479814 URB2Q14146 1524 aaKnown RBP35.27■■■■□ 3.24
MMP23B-205ENST00000479814 PRDM2Q13029 1718 aa35.19■■■■□ 3.22
MMP23B-205ENST00000479814 TOPBP1Q92547 1522 aa34.95■■■■□ 3.19
MMP23B-205ENST00000479814 ABCC8Q09428 1581 aa34.95■■■■□ 3.18
MMP23B-205ENST00000479814 IFT140Q96RY7 1462 aa34.92■■■■□ 3.18
MMP23B-205ENST00000479814 OSCARQ8IYS5 282 aa34.91■■■■□ 3.18
MMP23B-205ENST00000479814 DNMBPQ6XZF7 1577 aa34.82■■■■□ 3.16
MMP23B-205ENST00000479814 ZNF608Q9ULD9 1512 aaPredicted RBP34.81■■■■□ 3.16
MMP23B-205ENST00000479814 TRIM41Q8WV44 630 aa34.71■■■■□ 3.15
MMP23B-205ENST00000479814 SUPT5HO00267 1087 aaKnown RBP34.67■■■■□ 3.14
MMP23B-205ENST00000479814 POLA1P09884 1462 aaPredicted RBP34.6■■■■□ 3.13
MMP23B-205ENST00000479814 TARBP1Q13395 1621 aaKnown RBP34.58■■■■□ 3.13
MMP23B-205ENST00000479814 EIF4G3O43432 1585 aaKnown RBP34.57■■■■□ 3.13
MMP23B-205ENST00000479814 AQRO60306 1485 aaKnown RBP eCLIP34.56■■■■□ 3.12
MMP23B-205ENST00000479814 SOGA1O94964 1423 aa34.51■■■■□ 3.12
MMP23B-205ENST00000479814 RAD54L2Q9Y4B4 1467 aa34.49■■■■□ 3.11
MMP23B-205ENST00000479814 FGD5Q6ZNL6 1462 aa34.42■■■■□ 3.1
MMP23B-205ENST00000479814 CUX1P39880 1505 aa34.4■■■■□ 3.1
MMP23B-205ENST00000479814 TDRD9Q8NDG6 1382 aaKnown RBP34.4■■■■□ 3.1
MMP23B-205ENST00000479814 FBLN2P98095 1184 aa34.36■■■■□ 3.09
MMP23B-205ENST00000479814 RIMBP3CA6NJZ7 1639 aa34.28■■■■□ 3.08
MMP23B-205ENST00000479814 RIMBP3BA6NNM3 1639 aa34.28■■■■□ 3.08
MMP23B-205ENST00000479814 RIMBP3Q9UFD9 1639 aa34.28■■■■□ 3.08
MMP23B-205ENST00000479814 WDR97A6NE52 1622 aa34.27■■■■□ 3.08
MMP23B-205ENST00000479814 CHD1O14646 1710 aa34.24■■■■□ 3.07
MMP23B-205ENST00000479814 ARHGEF11O15085 1522 aa34.22■■■■□ 3.07
MMP23B-205ENST00000479814 SNAPC4Q5SXM2 1469 aa34.18■■■■□ 3.06
MMP23B-205ENST00000479814 GRIN2BQ13224 1484 aa34.16■■■■□ 3.06
MMP23B-205ENST00000479814 CHMP7Q8WUX9 453 aaPredicted RBP34.15■■■■□ 3.06
MMP23B-205ENST00000479814 MAGI1Q96QZ7 1491 aaPredicted RBP34.12■■■■□ 3.05
MMP23B-205ENST00000479814 GAPVD1Q14C86 1478 aa34.07■■■■□ 3.04
MMP23B-205ENST00000479814 ABCA10Q8WWZ4 1543 aa34.06■■■■□ 3.04
MMP23B-205ENST00000479814 CYB5RLQ6IPT4 315 aa34.06■■■■□ 3.04
MMP23B-205ENST00000479814 WRNQ14191 1432 aaPredicted RBP eCLIP34.01■■■■□ 3.03
MMP23B-205ENST00000479814 SYNJ2O15056 1496 aa34.01■■■■□ 3.03
MMP23B-205ENST00000479814 SYNJ1O43426 1573 aa33.95■■■■□ 3.03
MMP23B-205ENST00000479814 ABCA5Q8WWZ7 1642 aa33.93■■■■□ 3.02
MMP23B-205ENST00000479814 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
MMP23B-205ENST00000479814 TOP2BQ02880 1626 aa33.92■■■■□ 3.02
MMP23B-205ENST00000479814 CLASP1Q7Z460 1538 aa33.9■■■■□ 3.02
MMP23B-205ENST00000479814 BIVM-ERCC5R4GMW8 1640 aa33.9■■■■□ 3.02
MMP23B-205ENST00000479814 ARAP1Q96P48 1450 aa33.89■■■■□ 3.02
MMP23B-205ENST00000479814 GRIN2AQ12879 1464 aa33.69■■■□□ 2.98
MMP23B-205ENST00000479814 FHAD1B1AJZ9 1412 aa33.66■■■□□ 2.98
MMP23B-205ENST00000479814 ADAMTS12P58397 1594 aa33.64■■■□□ 2.98
MMP23B-205ENST00000479814 ERICH3Q5RHP9 1530 aa33.63■■■□□ 2.97
MMP23B-205ENST00000479814 TRHP20396 242 aaPredicted RBP33.62■■■□□ 2.97
MMP23B-205ENST00000479814 NUP160Q12769 1436 aa33.57■■■□□ 2.96
MMP23B-205ENST00000479814 CEP170Q5SW79 1584 aa33.52■■■□□ 2.96
MMP23B-205ENST00000479814 ERCC6L2Q5T890 1561 aa33.39■■■□□ 2.94
MMP23B-205ENST00000479814 SHROOM2Q13796 1616 aa33.35■■■□□ 2.93
MMP23B-205ENST00000479814 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
MMP23B-205ENST00000479814 JPH4Q96JJ6 628 aa33.33■■■□□ 2.93
MMP23B-205ENST00000479814 IGF1RP08069 1367 aa33.32■■■□□ 2.92
MMP23B-205ENST00000479814 PRG4Q92954 1404 aaPredicted RBP33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms