RNA–Protein interactions for RNA: ENST00000479803.1

SCML4-211, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 3

Gene SCML4, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-211ENST00000479803 NISCHQ9Y2I1 1504 aa26.82■■□□□ 1.88
SCML4-211ENST00000479803 ABCC9O60706 1549 aa25.02■■□□□ 1.6
SCML4-211ENST00000479803 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
SCML4-211ENST00000479803 DNAJC5BQ9UF47 199 aa24.12■■□□□ 1.45
SCML4-211ENST00000479803 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
SCML4-211ENST00000479803 UNC13AQ9UPW8 1703 aa23.17■■□□□ 1.3
SCML4-211ENST00000479803 NACADO15069 1562 aa23.16■■□□□ 1.3
SCML4-211ENST00000479803 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
SCML4-211ENST00000479803 BICRAQ9NZM4 1560 aa22.95■■□□□ 1.26
SCML4-211ENST00000479803 DCAF8L2P0C7V8 631 aa22.81■■□□□ 1.24
SCML4-211ENST00000479803 CC2D2AQ9P2K1 1620 aa22.61■■□□□ 1.21
SCML4-211ENST00000479803 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
SCML4-211ENST00000479803 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
SCML4-211ENST00000479803 DNAJC5Q9H3Z4 198 aa22.54■■□□□ 1.2
SCML4-211ENST00000479803 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
SCML4-211ENST00000479803 EIF4G1Q04637 1599 aaKnown RBP22.38■■□□□ 1.17
SCML4-211ENST00000479803 SCRIBQ14160 1630 aa22.2■■□□□ 1.14
SCML4-211ENST00000479803 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
SCML4-211ENST00000479803 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
SCML4-211ENST00000479803 CUX2O14529 1486 aa21.79■■□□□ 1.08
SCML4-211ENST00000479803 ERCC6Q03468 1493 aa21.58■■□□□ 1.04
SCML4-211ENST00000479803 NCAPD3P42695 1498 aa21.39■■□□□ 1.01
SCML4-211ENST00000479803 NESP48681 1621 aa21.35■■□□□ 1.01
SCML4-211ENST00000479803 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
SCML4-211ENST00000479803 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
SCML4-211ENST00000479803 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
SCML4-211ENST00000479803 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
SCML4-211ENST00000479803 SMARCA2P51531 1590 aa21.12■□□□□ 0.97
SCML4-211ENST00000479803 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
SCML4-211ENST00000479803 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
SCML4-211ENST00000479803 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
SCML4-211ENST00000479803 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
SCML4-211ENST00000479803 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.94
SCML4-211ENST00000479803 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
SCML4-211ENST00000479803 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
SCML4-211ENST00000479803 WDR62O43379 1518 aa20.79■□□□□ 0.92
SCML4-211ENST00000479803 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
SCML4-211ENST00000479803 MROH2BQ7Z745 1585 aa20.7■□□□□ 0.9
SCML4-211ENST00000479803 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
SCML4-211ENST00000479803 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
SCML4-211ENST00000479803 RIMBP3CA6NJZ7 1639 aa20.59■□□□□ 0.89
SCML4-211ENST00000479803 RIMBP3BA6NNM3 1639 aa20.59■□□□□ 0.89
SCML4-211ENST00000479803 RIMBP3Q9UFD9 1639 aa20.59■□□□□ 0.89
SCML4-211ENST00000479803 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
SCML4-211ENST00000479803 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
SCML4-211ENST00000479803 WIZO95785 1651 aa20.46■□□□□ 0.87
SCML4-211ENST00000479803 ARHGEF11O15085 1522 aa20.41■□□□□ 0.86
SCML4-211ENST00000479803 URB2Q14146 1524 aaKnown RBP20.41■□□□□ 0.86
SCML4-211ENST00000479803 CFTRP13569 1480 aa20.34■□□□□ 0.85
SCML4-211ENST00000479803 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.84
SCML4-211ENST00000479803 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
SCML4-211ENST00000479803 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
SCML4-211ENST00000479803 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
SCML4-211ENST00000479803 CHD1O14646 1710 aa20.17■□□□□ 0.82
SCML4-211ENST00000479803 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
SCML4-211ENST00000479803 IFT140Q96RY7 1462 aa20.15■□□□□ 0.82
SCML4-211ENST00000479803 EIF4G3O43432 1585 aaKnown RBP20.14■□□□□ 0.81
SCML4-211ENST00000479803 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
SCML4-211ENST00000479803 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
SCML4-211ENST00000479803 AEBP2Q6ZN18 517 aaPredicted RBP20.04■□□□□ 0.8
SCML4-211ENST00000479803 RSF1Q96T23 1441 aaPredicted RBP19.99■□□□□ 0.79
SCML4-211ENST00000479803 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
SCML4-211ENST00000479803 AQRO60306 1485 aaKnown RBP eCLIP19.96■□□□□ 0.79
SCML4-211ENST00000479803 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
SCML4-211ENST00000479803 FBLN2P98095 1184 aa19.87■□□□□ 0.77
SCML4-211ENST00000479803 CLASP1Q7Z460 1538 aa19.86■□□□□ 0.77
SCML4-211ENST00000479803 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
SCML4-211ENST00000479803 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
SCML4-211ENST00000479803 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
SCML4-211ENST00000479803 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
SCML4-211ENST00000479803 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
SCML4-211ENST00000479803 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
SCML4-211ENST00000479803 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
SCML4-211ENST00000479803 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
SCML4-211ENST00000479803 WDR97A6NE52 1622 aa19.63■□□□□ 0.73
SCML4-211ENST00000479803 SOGA1O94964 1423 aa19.63■□□□□ 0.73
SCML4-211ENST00000479803 MAGI1Q96QZ7 1491 aaPredicted RBP19.62■□□□□ 0.73
SCML4-211ENST00000479803 CHMP7Q8WUX9 453 aaPredicted RBP19.6■□□□□ 0.73
SCML4-211ENST00000479803 SYNJ2O15056 1496 aa19.58■□□□□ 0.72
SCML4-211ENST00000479803 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
SCML4-211ENST00000479803 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
SCML4-211ENST00000479803 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
SCML4-211ENST00000479803 KIF13AQ9H1H9 1805 aa19.55■□□□□ 0.72
SCML4-211ENST00000479803 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
SCML4-211ENST00000479803 CUX1P39880 1505 aa19.49■□□□□ 0.71
SCML4-211ENST00000479803 CEP170Q5SW79 1584 aa19.4■□□□□ 0.7
SCML4-211ENST00000479803 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
SCML4-211ENST00000479803 ILDR1Q86SU0 546 aaPredicted RBP19.37■□□□□ 0.69
SCML4-211ENST00000479803 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
SCML4-211ENST00000479803 GRIN2AQ12879 1464 aa19.33■□□□□ 0.68
SCML4-211ENST00000479803 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
SCML4-211ENST00000479803 NUP160Q12769 1436 aa19.29■□□□□ 0.68
SCML4-211ENST00000479803 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
SCML4-211ENST00000479803 KDM4FA0A1W2PPD8 638 aa19.28■□□□□ 0.68
SCML4-211ENST00000479803 SUPT5HO00267 1087 aaKnown RBP19.24■□□□□ 0.67
SCML4-211ENST00000479803 ABCC10Q5T3U5 1492 aa19.2■□□□□ 0.66
SCML4-211ENST00000479803 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
SCML4-211ENST00000479803 KDM6BO15054 1643 aa19.18■□□□□ 0.66
SCML4-211ENST00000479803 TSPOAP1O95153 1857 aa19.17■□□□□ 0.66
SCML4-211ENST00000479803 FAM69CQ0P6D2 419 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms