RNA–Protein interactions for RNA: ENST00000479767.1

LCN8-202, Transcript of lipocalin 8, humanhuman

TSL 1 (best)

Gene LCN8, Length 969 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN8-202ENST00000479767 NISCHQ9Y2I1 1504 aa44.37■■■■■ 4.69
LCN8-202ENST00000479767 CCDC180Q9P1Z9 1646 aa39.94■■■■□ 3.98
LCN8-202ENST00000479767 ABCC9O60706 1549 aa39.74■■■■□ 3.95
LCN8-202ENST00000479767 RB1CC1Q8TDY2 1594 aa37.97■■■■□ 3.67
LCN8-202ENST00000479767 NACADO15069 1562 aa37.75■■■■□ 3.63
LCN8-202ENST00000479767 DNAJC5BQ9UF47 199 aa37.34■■■■□ 3.57
LCN8-202ENST00000479767 MYO15BQ96JP2 1530 aa37.31■■■■□ 3.56
LCN8-202ENST00000479767 DCAF8L2P0C7V8 631 aa37.26■■■■□ 3.56
LCN8-202ENST00000479767 UNC13AQ9UPW8 1703 aa37.13■■■■□ 3.54
LCN8-202ENST00000479767 PABPN1Q86U42 306 aaKnown RBP eCLIP36.95■■■■□ 3.51
LCN8-202ENST00000479767 BICRAQ9NZM4 1560 aa36.84■■■■□ 3.49
LCN8-202ENST00000479767 DCAF1Q9Y4B6 1507 aa36.78■■■■□ 3.48
LCN8-202ENST00000479767 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
LCN8-202ENST00000479767 SHROOM4Q9ULL8 1493 aa36.5■■■■□ 3.43
LCN8-202ENST00000479767 SCRIBQ14160 1630 aa36.16■■■■□ 3.38
LCN8-202ENST00000479767 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.35
LCN8-202ENST00000479767 EIF4G1Q04637 1599 aaKnown RBP35.93■■■■□ 3.34
LCN8-202ENST00000479767 CECR2Q9BXF3 1484 aa35.87■■■■□ 3.33
LCN8-202ENST00000479767 NCAPD3P42695 1498 aa34.84■■■■□ 3.17
LCN8-202ENST00000479767 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
LCN8-202ENST00000479767 SMARCA4P51532 1647 aa34.62■■■■□ 3.13
LCN8-202ENST00000479767 SMARCA2P51531 1590 aa34.6■■■■□ 3.13
LCN8-202ENST00000479767 HMGXB3Q12766 1538 aa34.57■■■■□ 3.12
LCN8-202ENST00000479767 BAZ1AQ9NRL2 1556 aaPredicted RBP34.47■■■■□ 3.11
LCN8-202ENST00000479767 DNAJC5Q9H3Z4 198 aa34.44■■■■□ 3.1
LCN8-202ENST00000479767 CUX2O14529 1486 aa34.44■■■■□ 3.1
LCN8-202ENST00000479767 PEG3Q9GZU2 1588 aa34.38■■■■□ 3.09
LCN8-202ENST00000479767 ERCC6Q03468 1493 aa34.34■■■■□ 3.09
LCN8-202ENST00000479767 BAZ1BQ9UIG0 1483 aaKnown RBP34.28■■■■□ 3.08
LCN8-202ENST00000479767 NESP48681 1621 aa34.13■■■■□ 3.05
LCN8-202ENST00000479767 MROH2BQ7Z745 1585 aa34.12■■■■□ 3.05
LCN8-202ENST00000479767 LAMC3Q9Y6N6 1575 aa34.06■■■■□ 3.04
LCN8-202ENST00000479767 THOC2Q8NI27 1593 aaKnown RBP33.89■■■■□ 3.02
LCN8-202ENST00000479767 PDS5BQ9NTI5 1447 aa33.83■■■■□ 3.01
LCN8-202ENST00000479767 KIF21AQ7Z4S6 1674 aa33.77■■■■□ 3
LCN8-202ENST00000479767 CADPSQ9ULU8 1353 aa33.72■■■□□ 2.99
LCN8-202ENST00000479767 WIZO95785 1651 aa33.71■■■□□ 2.99
LCN8-202ENST00000479767 MRC2Q9UBG0 1479 aa33.5■■■□□ 2.95
LCN8-202ENST00000479767 WDR62O43379 1518 aa33.45■■■□□ 2.95
LCN8-202ENST00000479767 RSF1Q96T23 1441 aaPredicted RBP33.42■■■□□ 2.94
LCN8-202ENST00000479767 CFTRP13569 1480 aa33.35■■■□□ 2.93
LCN8-202ENST00000479767 CEP164Q9UPV0 1460 aa33.34■■■□□ 2.93
LCN8-202ENST00000479767 TOP2AP11388 1531 aaKnown RBP33.33■■■□□ 2.93
LCN8-202ENST00000479767 FANCD2Q9BXW9 1451 aa33.29■■■□□ 2.92
LCN8-202ENST00000479767 PRDM2Q13029 1718 aa33.09■■■□□ 2.89
LCN8-202ENST00000479767 URB2Q14146 1524 aaKnown RBP33.01■■■□□ 2.87
LCN8-202ENST00000479767 CCDC88BA6NC98 1476 aa32.92■■■□□ 2.86
LCN8-202ENST00000479767 OSCARQ8IYS5 282 aa32.82■■■□□ 2.84
LCN8-202ENST00000479767 ABCC8Q09428 1581 aa32.73■■■□□ 2.83
LCN8-202ENST00000479767 IFT140Q96RY7 1462 aa32.72■■■□□ 2.83
LCN8-202ENST00000479767 TRIM41Q8WV44 630 aa32.7■■■□□ 2.83
LCN8-202ENST00000479767 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
LCN8-202ENST00000479767 DNMBPQ6XZF7 1577 aa32.58■■■□□ 2.81
LCN8-202ENST00000479767 ZNF608Q9ULD9 1512 aaPredicted RBP32.57■■■□□ 2.8
LCN8-202ENST00000479767 EIF4G3O43432 1585 aaKnown RBP32.44■■■□□ 2.78
LCN8-202ENST00000479767 TARBP1Q13395 1621 aaKnown RBP32.43■■■□□ 2.78
LCN8-202ENST00000479767 RIMBP3CA6NJZ7 1639 aa32.36■■■□□ 2.77
LCN8-202ENST00000479767 RIMBP3BA6NNM3 1639 aa32.36■■■□□ 2.77
LCN8-202ENST00000479767 RIMBP3Q9UFD9 1639 aa32.36■■■□□ 2.77
LCN8-202ENST00000479767 POLA1P09884 1462 aaPredicted RBP32.33■■■□□ 2.77
LCN8-202ENST00000479767 AQRO60306 1485 aaKnown RBP eCLIP32.28■■■□□ 2.76
LCN8-202ENST00000479767 ARHGEF11O15085 1522 aa32.25■■■□□ 2.75
LCN8-202ENST00000479767 CHD1O14646 1710 aa32.23■■■□□ 2.75
LCN8-202ENST00000479767 WDR97A6NE52 1622 aa32.22■■■□□ 2.75
LCN8-202ENST00000479767 SOGA1O94964 1423 aa32.17■■■□□ 2.74
LCN8-202ENST00000479767 RAD54L2Q9Y4B4 1467 aa32.14■■■□□ 2.74
LCN8-202ENST00000479767 FGD5Q6ZNL6 1462 aa32.1■■■□□ 2.73
LCN8-202ENST00000479767 CUX1P39880 1505 aa32.06■■■□□ 2.72
LCN8-202ENST00000479767 TDRD9Q8NDG6 1382 aaKnown RBP32.06■■■□□ 2.72
LCN8-202ENST00000479767 FBLN2P98095 1184 aa32■■■□□ 2.71
LCN8-202ENST00000479767 MAGI1Q96QZ7 1491 aaPredicted RBP31.97■■■□□ 2.71
LCN8-202ENST00000479767 CYB5RLQ6IPT4 315 aa31.95■■■□□ 2.71
LCN8-202ENST00000479767 SNAPC4Q5SXM2 1469 aa31.95■■■□□ 2.7
LCN8-202ENST00000479767 GRIN2BQ13224 1484 aa31.93■■■□□ 2.7
LCN8-202ENST00000479767 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
LCN8-202ENST00000479767 CLASP1Q7Z460 1538 aa31.88■■■□□ 2.69
LCN8-202ENST00000479767 SYNJ1O43426 1573 aa31.86■■■□□ 2.69
LCN8-202ENST00000479767 CHMP7Q8WUX9 453 aaPredicted RBP31.85■■■□□ 2.69
LCN8-202ENST00000479767 SYNJ2O15056 1496 aa31.84■■■□□ 2.69
LCN8-202ENST00000479767 PBRM1Q86U86 1689 aa31.81■■■□□ 2.68
LCN8-202ENST00000479767 ABCA10Q8WWZ4 1543 aa31.8■■■□□ 2.68
LCN8-202ENST00000479767 GAPVD1Q14C86 1478 aa31.8■■■□□ 2.68
LCN8-202ENST00000479767 ABCA5Q8WWZ7 1642 aa31.75■■■□□ 2.67
LCN8-202ENST00000479767 SUPT5HO00267 1087 aaKnown RBP31.73■■■□□ 2.67
LCN8-202ENST00000479767 WRNQ14191 1432 aaPredicted RBP eCLIP31.63■■■□□ 2.65
LCN8-202ENST00000479767 BIVM-ERCC5R4GMW8 1640 aa31.63■■■□□ 2.65
LCN8-202ENST00000479767 TOP2BQ02880 1626 aa31.61■■■□□ 2.65
LCN8-202ENST00000479767 TRHP20396 242 aaPredicted RBP31.57■■■□□ 2.64
LCN8-202ENST00000479767 GRIN2AQ12879 1464 aa31.51■■■□□ 2.63
LCN8-202ENST00000479767 ADAMTS12P58397 1594 aa31.48■■■□□ 2.63
LCN8-202ENST00000479767 NUP160Q12769 1436 aa31.44■■■□□ 2.62
LCN8-202ENST00000479767 ERICH3Q5RHP9 1530 aa31.43■■■□□ 2.62
LCN8-202ENST00000479767 FHAD1B1AJZ9 1412 aa31.41■■■□□ 2.62
LCN8-202ENST00000479767 CEP170Q5SW79 1584 aa31.37■■■□□ 2.61
LCN8-202ENST00000479767 SHROOM2Q13796 1616 aa31.35■■■□□ 2.61
LCN8-202ENST00000479767 ERCC6L2Q5T890 1561 aa31.27■■■□□ 2.6
LCN8-202ENST00000479767 JPH4Q96JJ6 628 aa31.09■■■□□ 2.57
LCN8-202ENST00000479767 PRG4Q92954 1404 aaPredicted RBP31.07■■■□□ 2.56
LCN8-202ENST00000479767 RUSC2Q8N2Y8 1516 aa31.03■■■□□ 2.56
LCN8-202ENST00000479767 CUL7Q14999 1698 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms