RNA–Protein interactions for RNA: ENST00000479645.1

GTSE1-203, Transcript of G2 and S-phase expressed 1, humanhuman

TSL 1 (best)

Gene GTSE1, Length 1,111 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTSE1-203ENST00000479645 NISCHQ9Y2I1 1504 aa40.89■■■■■ 4.14
GTSE1-203ENST00000479645 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
GTSE1-203ENST00000479645 ABCC9O60706 1549 aa35.53■■■■□ 3.28
GTSE1-203ENST00000479645 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
GTSE1-203ENST00000479645 RB1CC1Q8TDY2 1594 aa34.2■■■■□ 3.07
GTSE1-203ENST00000479645 NACADO15069 1562 aa34.18■■■■□ 3.06
GTSE1-203ENST00000479645 ZCCHC6Q5VYS8 1495 aaKnown RBP34.05■■■■□ 3.04
GTSE1-203ENST00000479645 MYO15BQ96JP2 1530 aa33.99■■■■□ 3.03
GTSE1-203ENST00000479645 DCAF1Q9Y4B6 1507 aa33.85■■■■□ 3.01
GTSE1-203ENST00000479645 UNC13AQ9UPW8 1703 aa33.4■■■□□ 2.94
GTSE1-203ENST00000479645 PABPN1Q86U42 306 aaKnown RBP eCLIP33.25■■■□□ 2.91
GTSE1-203ENST00000479645 BICRAQ9NZM4 1560 aa33.15■■■□□ 2.9
GTSE1-203ENST00000479645 SCRIBQ14160 1630 aa33.12■■■□□ 2.89
GTSE1-203ENST00000479645 SHROOM4Q9ULL8 1493 aa32.82■■■□□ 2.84
GTSE1-203ENST00000479645 DNAJC5BQ9UF47 199 aa32.66■■■□□ 2.82
GTSE1-203ENST00000479645 EIF4G1Q04637 1599 aaKnown RBP32.28■■■□□ 2.76
GTSE1-203ENST00000479645 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
GTSE1-203ENST00000479645 CECR2Q9BXF3 1484 aa31.94■■■□□ 2.7
GTSE1-203ENST00000479645 SMARCA4P51532 1647 aa31.7■■■□□ 2.66
GTSE1-203ENST00000479645 BAZ1AQ9NRL2 1556 aaPredicted RBP31.69■■■□□ 2.66
GTSE1-203ENST00000479645 NCAPD3P42695 1498 aa31.56■■■□□ 2.64
GTSE1-203ENST00000479645 ATAD2BQ9ULI0 1458 aa31.56■■■□□ 2.64
GTSE1-203ENST00000479645 SMARCA2P51531 1590 aa31.51■■■□□ 2.63
GTSE1-203ENST00000479645 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.63
GTSE1-203ENST00000479645 PEG3Q9GZU2 1588 aa31.42■■■□□ 2.62
GTSE1-203ENST00000479645 HMGXB3Q12766 1538 aa31.36■■■□□ 2.61
GTSE1-203ENST00000479645 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
GTSE1-203ENST00000479645 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
GTSE1-203ENST00000479645 WIZO95785 1651 aa31.16■■■□□ 2.58
GTSE1-203ENST00000479645 TOP2AP11388 1531 aaKnown RBP30.83■■■□□ 2.53
GTSE1-203ENST00000479645 NESP48681 1621 aa30.75■■■□□ 2.51
GTSE1-203ENST00000479645 LAMC3Q9Y6N6 1575 aa30.7■■■□□ 2.5
GTSE1-203ENST00000479645 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
GTSE1-203ENST00000479645 ERCC6Q03468 1493 aa30.63■■■□□ 2.49
GTSE1-203ENST00000479645 PDS5BQ9NTI5 1447 aa30.51■■■□□ 2.47
GTSE1-203ENST00000479645 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
GTSE1-203ENST00000479645 CFTRP13569 1480 aa30.44■■■□□ 2.46
GTSE1-203ENST00000479645 SUPT5HO00267 1087 aaKnown RBP30.42■■■□□ 2.46
GTSE1-203ENST00000479645 KIF21AQ7Z4S6 1674 aa30.37■■■□□ 2.45
GTSE1-203ENST00000479645 CUX2O14529 1486 aa30.31■■■□□ 2.44
GTSE1-203ENST00000479645 FANCD2Q9BXW9 1451 aa30.26■■■□□ 2.44
GTSE1-203ENST00000479645 THOC2Q8NI27 1593 aaKnown RBP30.25■■■□□ 2.43
GTSE1-203ENST00000479645 CEP164Q9UPV0 1460 aa30.21■■■□□ 2.43
GTSE1-203ENST00000479645 PRDM2Q13029 1718 aa30.17■■■□□ 2.42
GTSE1-203ENST00000479645 MRC2Q9UBG0 1479 aa30.17■■■□□ 2.42
GTSE1-203ENST00000479645 WDR62O43379 1518 aa30.06■■■□□ 2.4
GTSE1-203ENST00000479645 URB2Q14146 1524 aaKnown RBP29.95■■■□□ 2.38
GTSE1-203ENST00000479645 ABCC8Q09428 1581 aa29.81■■■□□ 2.36
GTSE1-203ENST00000479645 TOPBP1Q92547 1522 aa29.77■■■□□ 2.36
GTSE1-203ENST00000479645 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
GTSE1-203ENST00000479645 IFT140Q96RY7 1462 aa29.6■■■□□ 2.33
GTSE1-203ENST00000479645 CUX1P39880 1505 aa29.54■■■□□ 2.32
GTSE1-203ENST00000479645 POLA1P09884 1462 aaPredicted RBP29.52■■■□□ 2.32
GTSE1-203ENST00000479645 FGD5Q6ZNL6 1462 aa29.45■■■□□ 2.31
GTSE1-203ENST00000479645 TARBP1Q13395 1621 aaKnown RBP29.44■■■□□ 2.3
GTSE1-203ENST00000479645 ZNF608Q9ULD9 1512 aaPredicted RBP29.44■■■□□ 2.3
GTSE1-203ENST00000479645 SOGA1O94964 1423 aa29.44■■■□□ 2.3
GTSE1-203ENST00000479645 DNAJC5Q9H3Z4 198 aa29.43■■■□□ 2.3
GTSE1-203ENST00000479645 RAD54L2Q9Y4B4 1467 aa29.4■■■□□ 2.3
GTSE1-203ENST00000479645 WRNQ14191 1432 aaPredicted RBP eCLIP29.38■■■□□ 2.29
GTSE1-203ENST00000479645 TOP2BQ02880 1626 aa29.31■■■□□ 2.28
GTSE1-203ENST00000479645 AQRO60306 1485 aaKnown RBP eCLIP29.3■■■□□ 2.28
GTSE1-203ENST00000479645 EIF4G3O43432 1585 aaKnown RBP29.3■■■□□ 2.28
GTSE1-203ENST00000479645 BIVM-ERCC5R4GMW8 1640 aa29.29■■■□□ 2.28
GTSE1-203ENST00000479645 SYNJ1O43426 1573 aa29.27■■■□□ 2.28
GTSE1-203ENST00000479645 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.27
GTSE1-203ENST00000479645 WDR97A6NE52 1622 aa29.22■■■□□ 2.27
GTSE1-203ENST00000479645 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
GTSE1-203ENST00000479645 OSCARQ8IYS5 282 aa29.13■■■□□ 2.25
GTSE1-203ENST00000479645 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
GTSE1-203ENST00000479645 GRIN2BQ13224 1484 aa29.07■■■□□ 2.24
GTSE1-203ENST00000479645 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
GTSE1-203ENST00000479645 SNAPC4Q5SXM2 1469 aa29■■■□□ 2.23
GTSE1-203ENST00000479645 MAGI1Q96QZ7 1491 aaPredicted RBP28.98■■■□□ 2.23
GTSE1-203ENST00000479645 FBLN2P98095 1184 aa28.97■■■□□ 2.23
GTSE1-203ENST00000479645 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
GTSE1-203ENST00000479645 CHD1O14646 1710 aa28.93■■■□□ 2.22
GTSE1-203ENST00000479645 CHMP7Q8WUX9 453 aaPredicted RBP28.92■■■□□ 2.22
GTSE1-203ENST00000479645 SYNJ2O15056 1496 aa28.87■■■□□ 2.21
GTSE1-203ENST00000479645 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
GTSE1-203ENST00000479645 KIF27Q86VH2 1401 aa28.78■■■□□ 2.2
GTSE1-203ENST00000479645 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
GTSE1-203ENST00000479645 FHAD1B1AJZ9 1412 aa28.75■■■□□ 2.19
GTSE1-203ENST00000479645 ADAMTS12P58397 1594 aa28.74■■■□□ 2.19
GTSE1-203ENST00000479645 IGF1RP08069 1367 aa28.69■■■□□ 2.18
GTSE1-203ENST00000479645 GRIN2AQ12879 1464 aa28.68■■■□□ 2.18
GTSE1-203ENST00000479645 CLASP1Q7Z460 1538 aa28.64■■■□□ 2.17
GTSE1-203ENST00000479645 ARHGEF11O15085 1522 aa28.58■■■□□ 2.17
GTSE1-203ENST00000479645 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
GTSE1-203ENST00000479645 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
GTSE1-203ENST00000479645 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
GTSE1-203ENST00000479645 NUP160Q12769 1436 aa28.57■■■□□ 2.16
GTSE1-203ENST00000479645 CUL7Q14999 1698 aa28.54■■■□□ 2.16
GTSE1-203ENST00000479645 CEP170Q5SW79 1584 aa28.52■■■□□ 2.16
GTSE1-203ENST00000479645 CARMIL1Q5VZK9 1371 aa28.51■■■□□ 2.16
GTSE1-203ENST00000479645 RUSC2Q8N2Y8 1516 aa28.51■■■□□ 2.15
GTSE1-203ENST00000479645 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
GTSE1-203ENST00000479645 CYB5RLQ6IPT4 315 aa28.37■■■□□ 2.13
GTSE1-203ENST00000479645 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
GTSE1-203ENST00000479645 JPH4Q96JJ6 628 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms