RNA–Protein interactions for RNA: ENST00000479574.5

MED18-205, Transcript of mediator complex subunit 18, humanhuman

TSL 2

Gene MED18, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED18-205ENST00000479574 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.73
MED18-205ENST00000479574 ABCC9O60706 1549 aa23.58■■□□□ 1.36
MED18-205ENST00000479574 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
MED18-205ENST00000479574 DNAJC5BQ9UF47 199 aa22.37■■□□□ 1.17
MED18-205ENST00000479574 RB1CC1Q8TDY2 1594 aa22.31■■□□□ 1.16
MED18-205ENST00000479574 NACADO15069 1562 aa22.09■■□□□ 1.13
MED18-205ENST00000479574 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
MED18-205ENST00000479574 PABPN1Q86U42 306 aaKnown RBP eCLIP21.91■■□□□ 1.1
MED18-205ENST00000479574 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
MED18-205ENST00000479574 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.06
MED18-205ENST00000479574 BICRAQ9NZM4 1560 aa21.68■■□□□ 1.06
MED18-205ENST00000479574 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
MED18-205ENST00000479574 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
MED18-205ENST00000479574 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
MED18-205ENST00000479574 CC2D2AQ9P2K1 1620 aa21.28■■□□□ 1
MED18-205ENST00000479574 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
MED18-205ENST00000479574 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
MED18-205ENST00000479574 EIF4G1Q04637 1599 aaKnown RBP21.17■□□□□ 0.98
MED18-205ENST00000479574 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
MED18-205ENST00000479574 CUX2O14529 1486 aa20.43■□□□□ 0.86
MED18-205ENST00000479574 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
MED18-205ENST00000479574 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
MED18-205ENST00000479574 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
MED18-205ENST00000479574 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
MED18-205ENST00000479574 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
MED18-205ENST00000479574 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
MED18-205ENST00000479574 NESP48681 1621 aa20.17■□□□□ 0.82
MED18-205ENST00000479574 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
MED18-205ENST00000479574 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
MED18-205ENST00000479574 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.8
MED18-205ENST00000479574 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
MED18-205ENST00000479574 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
MED18-205ENST00000479574 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
MED18-205ENST00000479574 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
MED18-205ENST00000479574 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
MED18-205ENST00000479574 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.76
MED18-205ENST00000479574 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
MED18-205ENST00000479574 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
MED18-205ENST00000479574 WDR62O43379 1518 aa19.68■□□□□ 0.74
MED18-205ENST00000479574 WIZO95785 1651 aa19.65■□□□□ 0.74
MED18-205ENST00000479574 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
MED18-205ENST00000479574 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
MED18-205ENST00000479574 CFTRP13569 1480 aa19.48■□□□□ 0.71
MED18-205ENST00000479574 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
MED18-205ENST00000479574 URB2Q14146 1524 aaKnown RBP19.4■□□□□ 0.7
MED18-205ENST00000479574 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
MED18-205ENST00000479574 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
MED18-205ENST00000479574 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
MED18-205ENST00000479574 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
MED18-205ENST00000479574 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
MED18-205ENST00000479574 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
MED18-205ENST00000479574 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
MED18-205ENST00000479574 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
MED18-205ENST00000479574 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
MED18-205ENST00000479574 ARHGEF11O15085 1522 aa19.14■□□□□ 0.65
MED18-205ENST00000479574 TOPBP1Q92547 1522 aa19.14■□□□□ 0.65
MED18-205ENST00000479574 ABCC8Q09428 1581 aa19.09■□□□□ 0.65
MED18-205ENST00000479574 EIF4G3O43432 1585 aaKnown RBP19.08■□□□□ 0.65
MED18-205ENST00000479574 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
MED18-205ENST00000479574 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
MED18-205ENST00000479574 AQRO60306 1485 aaKnown RBP eCLIP19■□□□□ 0.63
MED18-205ENST00000479574 CHD1O14646 1710 aa19■□□□□ 0.63
MED18-205ENST00000479574 TARBP1Q13395 1621 aaKnown RBP19■□□□□ 0.63
MED18-205ENST00000479574 FBLN2P98095 1184 aa18.94■□□□□ 0.62
MED18-205ENST00000479574 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
MED18-205ENST00000479574 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
MED18-205ENST00000479574 TRHP20396 242 aaPredicted RBP18.91■□□□□ 0.62
MED18-205ENST00000479574 RAD54L2Q9Y4B4 1467 aa18.87■□□□□ 0.61
MED18-205ENST00000479574 SOGA1O94964 1423 aa18.84■□□□□ 0.61
MED18-205ENST00000479574 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
MED18-205ENST00000479574 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
MED18-205ENST00000479574 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
MED18-205ENST00000479574 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
MED18-205ENST00000479574 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
MED18-205ENST00000479574 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
MED18-205ENST00000479574 SYNJ1O43426 1573 aa18.74■□□□□ 0.59
MED18-205ENST00000479574 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
MED18-205ENST00000479574 GRIN2BQ13224 1484 aa18.71■□□□□ 0.59
MED18-205ENST00000479574 CUX1P39880 1505 aa18.7■□□□□ 0.58
MED18-205ENST00000479574 SYNJ2O15056 1496 aa18.68■□□□□ 0.58
MED18-205ENST00000479574 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
MED18-205ENST00000479574 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
MED18-205ENST00000479574 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
MED18-205ENST00000479574 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
MED18-205ENST00000479574 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
MED18-205ENST00000479574 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
MED18-205ENST00000479574 GRIN2AQ12879 1464 aa18.46■□□□□ 0.55
MED18-205ENST00000479574 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
MED18-205ENST00000479574 CEP170Q5SW79 1584 aa18.42■□□□□ 0.54
MED18-205ENST00000479574 NUP160Q12769 1436 aa18.41■□□□□ 0.54
MED18-205ENST00000479574 WRNQ14191 1432 aaPredicted RBP eCLIP18.41■□□□□ 0.54
MED18-205ENST00000479574 FHAD1B1AJZ9 1412 aa18.36■□□□□ 0.53
MED18-205ENST00000479574 SHROOM2Q13796 1616 aa18.36■□□□□ 0.53
MED18-205ENST00000479574 BIVM-ERCC5R4GMW8 1640 aa18.34■□□□□ 0.53
MED18-205ENST00000479574 TOP2BQ02880 1626 aa18.33■□□□□ 0.52
MED18-205ENST00000479574 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
MED18-205ENST00000479574 ERICH3Q5RHP9 1530 aa18.3■□□□□ 0.52
MED18-205ENST00000479574 KIF13AQ9H1H9 1805 aa18.27■□□□□ 0.52
MED18-205ENST00000479574 PRG4Q92954 1404 aaPredicted RBP18.26■□□□□ 0.51
MED18-205ENST00000479574 JPH4Q96JJ6 628 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms