RNA–Protein interactions for RNA: ENST00000479460.5

TRIM59-205, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-205ENST00000479460 NISCHQ9Y2I1 1504 aa49.34■■■■■ 5.49
TRIM59-205ENST00000479460 ABCC9O60706 1549 aa44.93■■■■■ 4.78
TRIM59-205ENST00000479460 CCDC180Q9P1Z9 1646 aa44.57■■■■■ 4.72
TRIM59-205ENST00000479460 RB1CC1Q8TDY2 1594 aa42.62■■■■■ 4.41
TRIM59-205ENST00000479460 DNAJC5BQ9UF47 199 aa42.56■■■■■ 4.4
TRIM59-205ENST00000479460 NACADO15069 1562 aa42.22■■■■■ 4.35
TRIM59-205ENST00000479460 DCAF8L2P0C7V8 631 aa41.74■■■■■ 4.27
TRIM59-205ENST00000479460 PABPN1Q86U42 306 aaKnown RBP eCLIP41.71■■■■■ 4.27
TRIM59-205ENST00000479460 UNC13AQ9UPW8 1703 aa41.69■■■■■ 4.26
TRIM59-205ENST00000479460 MYO15BQ96JP2 1530 aa41.49■■■■■ 4.23
TRIM59-205ENST00000479460 BICRAQ9NZM4 1560 aa41.39■■■■■ 4.22
TRIM59-205ENST00000479460 SHROOM4Q9ULL8 1493 aa40.83■■■■■ 4.13
TRIM59-205ENST00000479460 ZCCHC6Q5VYS8 1495 aaKnown RBP40.8■■■■■ 4.12
TRIM59-205ENST00000479460 DCAF1Q9Y4B6 1507 aa40.77■■■■■ 4.12
TRIM59-205ENST00000479460 CC2D2AQ9P2K1 1620 aa40.61■■■■■ 4.09
TRIM59-205ENST00000479460 CECR2Q9BXF3 1484 aa40.55■■■■■ 4.08
TRIM59-205ENST00000479460 SCRIBQ14160 1630 aa40.49■■■■■ 4.07
TRIM59-205ENST00000479460 EIF4G1Q04637 1599 aaKnown RBP40.41■■■■■ 4.06
TRIM59-205ENST00000479460 DNAJC5Q9H3Z4 198 aa39.48■■■■□ 3.91
TRIM59-205ENST00000479460 CUX2O14529 1486 aa38.99■■■■□ 3.83
TRIM59-205ENST00000479460 NCAPD3P42695 1498 aa38.96■■■■□ 3.83
TRIM59-205ENST00000479460 ERCC6Q03468 1493 aa38.85■■■■□ 3.81
TRIM59-205ENST00000479460 ATAD2BQ9ULI0 1458 aa38.75■■■■□ 3.79
TRIM59-205ENST00000479460 HMGXB3Q12766 1538 aa38.65■■■■□ 3.78
TRIM59-205ENST00000479460 SMARCA2P51531 1590 aa38.65■■■■□ 3.78
TRIM59-205ENST00000479460 SMARCA4P51532 1647 aa38.62■■■■□ 3.77
TRIM59-205ENST00000479460 NESP48681 1621 aa38.46■■■■□ 3.75
TRIM59-205ENST00000479460 BAZ1AQ9NRL2 1556 aaPredicted RBP38.36■■■■□ 3.73
TRIM59-205ENST00000479460 BAZ1BQ9UIG0 1483 aaKnown RBP38.35■■■■□ 3.73
TRIM59-205ENST00000479460 PEG3Q9GZU2 1588 aa38.27■■■■□ 3.72
TRIM59-205ENST00000479460 THOC2Q8NI27 1593 aaKnown RBP38.23■■■■□ 3.71
TRIM59-205ENST00000479460 LAMC3Q9Y6N6 1575 aa38.18■■■■□ 3.7
TRIM59-205ENST00000479460 KIF21AQ7Z4S6 1674 aa38.01■■■■□ 3.68
TRIM59-205ENST00000479460 MROH2BQ7Z745 1585 aa38■■■■□ 3.67
TRIM59-205ENST00000479460 PDS5BQ9NTI5 1447 aa37.95■■■■□ 3.67
TRIM59-205ENST00000479460 CADPSQ9ULU8 1353 aa37.72■■■■□ 3.63
TRIM59-205ENST00000479460 MRC2Q9UBG0 1479 aa37.65■■■■□ 3.62
TRIM59-205ENST00000479460 WDR62O43379 1518 aa37.6■■■■□ 3.61
TRIM59-205ENST00000479460 WIZO95785 1651 aa37.53■■■■□ 3.6
TRIM59-205ENST00000479460 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
TRIM59-205ENST00000479460 CEP164Q9UPV0 1460 aa37.39■■■■□ 3.58
TRIM59-205ENST00000479460 FANCD2Q9BXW9 1451 aa37.3■■■■□ 3.56
TRIM59-205ENST00000479460 CFTRP13569 1480 aa37.21■■■■□ 3.55
TRIM59-205ENST00000479460 OSCARQ8IYS5 282 aa37.07■■■■□ 3.52
TRIM59-205ENST00000479460 TOP2AP11388 1531 aaKnown RBP37.04■■■■□ 3.52
TRIM59-205ENST00000479460 URB2Q14146 1524 aaKnown RBP37.03■■■■□ 3.52
TRIM59-205ENST00000479460 RSF1Q96T23 1441 aaPredicted RBP37.02■■■■□ 3.52
TRIM59-205ENST00000479460 PRDM2Q13029 1718 aa36.88■■■■□ 3.49
TRIM59-205ENST00000479460 RIMBP3CA6NJZ7 1639 aa36.69■■■■□ 3.46
TRIM59-205ENST00000479460 RIMBP3BA6NNM3 1639 aa36.69■■■■□ 3.46
TRIM59-205ENST00000479460 RIMBP3Q9UFD9 1639 aa36.69■■■■□ 3.46
TRIM59-205ENST00000479460 IFT140Q96RY7 1462 aa36.68■■■■□ 3.46
TRIM59-205ENST00000479460 ZNF608Q9ULD9 1512 aaPredicted RBP36.64■■■■□ 3.46
TRIM59-205ENST00000479460 CCDC88BA6NC98 1476 aa36.59■■■■□ 3.45
TRIM59-205ENST00000479460 TOPBP1Q92547 1522 aa36.55■■■■□ 3.44
TRIM59-205ENST00000479460 ARHGEF11O15085 1522 aa36.51■■■■□ 3.44
TRIM59-205ENST00000479460 ABCC8Q09428 1581 aa36.46■■■■□ 3.43
TRIM59-205ENST00000479460 EIF4G3O43432 1585 aaKnown RBP36.45■■■■□ 3.43
TRIM59-205ENST00000479460 DNMBPQ6XZF7 1577 aa36.4■■■■□ 3.42
TRIM59-205ENST00000479460 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
TRIM59-205ENST00000479460 CHD1O14646 1710 aa36.29■■■■□ 3.4
TRIM59-205ENST00000479460 AQRO60306 1485 aaKnown RBP eCLIP36.24■■■■□ 3.398e-7■■■■■ 28.7
TRIM59-205ENST00000479460 CYB5RLQ6IPT4 315 aa36.2■■■■□ 3.39
TRIM59-205ENST00000479460 POLA1P09884 1462 aaPredicted RBP36.14■■■■□ 3.38
TRIM59-205ENST00000479460 ARAP1Q96P48 1450 aa36.11■■■■□ 3.37
TRIM59-205ENST00000479460 FBLN2P98095 1184 aa36.05■■■■□ 3.36
TRIM59-205ENST00000479460 RAD54L2Q9Y4B4 1467 aa35.99■■■■□ 3.35
TRIM59-205ENST00000479460 TRHP20396 242 aaPredicted RBP35.95■■■■□ 3.35
TRIM59-205ENST00000479460 SOGA1O94964 1423 aa35.94■■■■□ 3.34
TRIM59-205ENST00000479460 WDR97A6NE52 1622 aa35.93■■■■□ 3.34
TRIM59-205ENST00000479460 TDRD9Q8NDG6 1382 aaKnown RBP35.91■■■■□ 3.34
TRIM59-205ENST00000479460 SNAPC4Q5SXM2 1469 aa35.86■■■■□ 3.33
TRIM59-205ENST00000479460 CLASP1Q7Z460 1538 aa35.86■■■■□ 3.33
TRIM59-205ENST00000479460 FGD5Q6ZNL6 1462 aa35.84■■■■□ 3.33
TRIM59-205ENST00000479460 MAGI1Q96QZ7 1491 aaPredicted RBP35.79■■■■□ 3.32
TRIM59-205ENST00000479460 SYNJ1O43426 1573 aa35.78■■■■□ 3.32
TRIM59-205ENST00000479460 CHMP7Q8WUX9 453 aaPredicted RBP35.74■■■■□ 3.31
TRIM59-205ENST00000479460 CUX1P39880 1505 aa35.73■■■■□ 3.31
TRIM59-205ENST00000479460 GRIN2BQ13224 1484 aa35.72■■■■□ 3.31
TRIM59-205ENST00000479460 SYNJ2O15056 1496 aa35.67■■■■□ 3.3
TRIM59-205ENST00000479460 PBRM1Q86U86 1689 aa35.59■■■■□ 3.29
TRIM59-205ENST00000479460 GAPVD1Q14C86 1478 aa35.52■■■■□ 3.28
TRIM59-205ENST00000479460 ABCA5Q8WWZ7 1642 aa35.44■■■■□ 3.26
TRIM59-205ENST00000479460 ABCA10Q8WWZ4 1543 aa35.42■■■■□ 3.26
TRIM59-205ENST00000479460 AEBP2Q6ZN18 517 aaPredicted RBP35.28■■■■□ 3.24
TRIM59-205ENST00000479460 GRIN2AQ12879 1464 aa35.26■■■■□ 3.23
TRIM59-205ENST00000479460 ERCC6L2Q5T890 1561 aa35.22■■■■□ 3.23
TRIM59-205ENST00000479460 ADAMTS12P58397 1594 aa35.2■■■■□ 3.23
TRIM59-205ENST00000479460 NUP160Q12769 1436 aa35.17■■■■□ 3.22
TRIM59-205ENST00000479460 CEP170Q5SW79 1584 aa35.17■■■■□ 3.22
TRIM59-205ENST00000479460 WRNQ14191 1432 aaPredicted RBP eCLIP35.16■■■■□ 3.22
TRIM59-205ENST00000479460 SHROOM2Q13796 1616 aa35.1■■■■□ 3.21
TRIM59-205ENST00000479460 BIVM-ERCC5R4GMW8 1640 aa35.08■■■■□ 3.21
TRIM59-205ENST00000479460 TOP2BQ02880 1626 aa35.06■■■■□ 3.2
TRIM59-205ENST00000479460 FHAD1B1AJZ9 1412 aa35.06■■■■□ 3.2
TRIM59-205ENST00000479460 ERICH3Q5RHP9 1530 aa34.98■■■■□ 3.19
TRIM59-205ENST00000479460 SUPT5HO00267 1087 aaKnown RBP34.93■■■■□ 3.18
TRIM59-205ENST00000479460 KIF13AQ9H1H9 1805 aa34.91■■■■□ 3.18
TRIM59-205ENST00000479460 PRG4Q92954 1404 aaPredicted RBP34.84■■■■□ 3.17
TRIM59-205ENST00000479460 JPH4Q96JJ6 628 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms