RNA–Protein interactions for RNA: ENST00000479448.1

LAMB1-212, Transcript of laminin subunit beta 1, humanhuman

TSL 3

Gene LAMB1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-212ENST00000479448 NISCHQ9Y2I1 1504 aa30.46■■■□□ 2.47
LAMB1-212ENST00000479448 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
LAMB1-212ENST00000479448 ABCC9O60706 1549 aa25.89■■□□□ 1.74
LAMB1-212ENST00000479448 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
LAMB1-212ENST00000479448 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
LAMB1-212ENST00000479448 NACADO15069 1562 aa25.2■■□□□ 1.62
LAMB1-212ENST00000479448 DCAF1Q9Y4B6 1507 aa25.2■■□□□ 1.62
LAMB1-212ENST00000479448 RB1CC1Q8TDY2 1594 aa25.16■■□□□ 1.62
LAMB1-212ENST00000479448 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
LAMB1-212ENST00000479448 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
LAMB1-212ENST00000479448 UNC13AQ9UPW8 1703 aa24.6■■□□□ 1.53
LAMB1-212ENST00000479448 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.51
LAMB1-212ENST00000479448 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
LAMB1-212ENST00000479448 BICRAQ9NZM4 1560 aa24.23■■□□□ 1.47
LAMB1-212ENST00000479448 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
LAMB1-212ENST00000479448 EIF4G1Q04637 1599 aaKnown RBP23.64■■□□□ 1.37
LAMB1-212ENST00000479448 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
LAMB1-212ENST00000479448 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
LAMB1-212ENST00000479448 MROH2BQ7Z745 1585 aa23.47■■□□□ 1.35
LAMB1-212ENST00000479448 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
LAMB1-212ENST00000479448 SMARCA2P51531 1590 aa23.35■■□□□ 1.33
LAMB1-212ENST00000479448 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
LAMB1-212ENST00000479448 WIZO95785 1651 aa23.32■■□□□ 1.32
LAMB1-212ENST00000479448 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
LAMB1-212ENST00000479448 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
LAMB1-212ENST00000479448 ATAD2BQ9ULI0 1458 aa23.26■■□□□ 1.31
LAMB1-212ENST00000479448 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
LAMB1-212ENST00000479448 HMGXB3Q12766 1538 aa23.16■■□□□ 1.3
LAMB1-212ENST00000479448 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
LAMB1-212ENST00000479448 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
LAMB1-212ENST00000479448 TOP2AP11388 1531 aaKnown RBP23.09■■□□□ 1.29
LAMB1-212ENST00000479448 CCDC88BA6NC98 1476 aa22.76■■□□□ 1.23
LAMB1-212ENST00000479448 LAMC3Q9Y6N6 1575 aa22.58■■□□□ 1.2
LAMB1-212ENST00000479448 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
LAMB1-212ENST00000479448 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
LAMB1-212ENST00000479448 NESP48681 1621 aa22.49■■□□□ 1.19
LAMB1-212ENST00000479448 CFTRP13569 1480 aa22.49■■□□□ 1.19
LAMB1-212ENST00000479448 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
LAMB1-212ENST00000479448 ERCC6Q03468 1493 aa22.38■■□□□ 1.17
LAMB1-212ENST00000479448 KIF21AQ7Z4S6 1674 aa22.35■■□□□ 1.17
LAMB1-212ENST00000479448 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
LAMB1-212ENST00000479448 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
LAMB1-212ENST00000479448 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
LAMB1-212ENST00000479448 MRC2Q9UBG0 1479 aa22.14■■□□□ 1.13
LAMB1-212ENST00000479448 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.13
LAMB1-212ENST00000479448 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.13
LAMB1-212ENST00000479448 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.12
LAMB1-212ENST00000479448 WDR62O43379 1518 aa22.02■■□□□ 1.12
LAMB1-212ENST00000479448 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
LAMB1-212ENST00000479448 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
LAMB1-212ENST00000479448 CUX1P39880 1505 aa22.01■■□□□ 1.11
LAMB1-212ENST00000479448 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
LAMB1-212ENST00000479448 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
LAMB1-212ENST00000479448 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
LAMB1-212ENST00000479448 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
LAMB1-212ENST00000479448 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
LAMB1-212ENST00000479448 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
LAMB1-212ENST00000479448 CUX2O14529 1486 aa21.86■■□□□ 1.09
LAMB1-212ENST00000479448 POLA1P09884 1462 aaPredicted RBP21.84■■□□□ 1.09
LAMB1-212ENST00000479448 SOGA1O94964 1423 aa21.8■■□□□ 1.08
LAMB1-212ENST00000479448 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
LAMB1-212ENST00000479448 RAD54L2Q9Y4B4 1467 aa21.74■■□□□ 1.07
LAMB1-212ENST00000479448 TARBP1Q13395 1621 aaKnown RBP21.72■■□□□ 1.07
LAMB1-212ENST00000479448 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
LAMB1-212ENST00000479448 ABCA10Q8WWZ4 1543 aa21.67■■□□□ 1.06
LAMB1-212ENST00000479448 EIF4G3O43432 1585 aaKnown RBP21.62■■□□□ 1.05
LAMB1-212ENST00000479448 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
LAMB1-212ENST00000479448 PBRM1Q86U86 1689 aa21.59■■□□□ 1.05
LAMB1-212ENST00000479448 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
LAMB1-212ENST00000479448 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
LAMB1-212ENST00000479448 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.04
LAMB1-212ENST00000479448 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
LAMB1-212ENST00000479448 AQRO60306 1485 aaKnown RBP eCLIP21.54■■□□□ 1.04
LAMB1-212ENST00000479448 EEA1Q15075 1411 aa21.54■■□□□ 1.04
LAMB1-212ENST00000479448 FAM9AQ8IZU1 332 aaPredicted RBP21.51■■□□□ 1.03
LAMB1-212ENST00000479448 GRIN2BQ13224 1484 aa21.5■■□□□ 1.03
LAMB1-212ENST00000479448 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
LAMB1-212ENST00000479448 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
LAMB1-212ENST00000479448 CUL7Q14999 1698 aa21.44■■□□□ 1.02
LAMB1-212ENST00000479448 SNAPC4Q5SXM2 1469 aa21.41■■□□□ 1.02
LAMB1-212ENST00000479448 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.02
LAMB1-212ENST00000479448 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
LAMB1-212ENST00000479448 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
LAMB1-212ENST00000479448 IGF1RP08069 1367 aa21.35■■□□□ 1.01
LAMB1-212ENST00000479448 FBLN2P98095 1184 aa21.33■■□□□ 1.01
LAMB1-212ENST00000479448 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
LAMB1-212ENST00000479448 CARMIL1Q5VZK9 1371 aa21.31■■□□□ 1
LAMB1-212ENST00000479448 CHD1O14646 1710 aa21.3■■□□□ 1
LAMB1-212ENST00000479448 SYNJ2O15056 1496 aa21.29■■□□□ 1
LAMB1-212ENST00000479448 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
LAMB1-212ENST00000479448 KIF21BO75037 1637 aa21.28■■□□□ 1
LAMB1-212ENST00000479448 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
LAMB1-212ENST00000479448 EHMT2Q96KQ7 1210 aa21.24■□□□□ 0.99
LAMB1-212ENST00000479448 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
LAMB1-212ENST00000479448 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
LAMB1-212ENST00000479448 GRIN2AQ12879 1464 aa21.21■□□□□ 0.99
LAMB1-212ENST00000479448 UBTFP17480 764 aaKnown RBP21.16■□□□□ 0.98
LAMB1-212ENST00000479448 CTTNBP2Q8WZ74 1663 aa21.15■□□□□ 0.98
LAMB1-212ENST00000479448 CEP170Q5SW79 1584 aa21.07■□□□□ 0.96
LAMB1-212ENST00000479448 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms