RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 NISCHQ9Y2I1 1504 aa21.84■■□□□ 1.09
ITSN1-228ENST00000479424 ABCC9O60706 1549 aa19.68■□□□□ 0.74
ITSN1-228ENST00000479424 CCDC180Q9P1Z9 1646 aa19.64■□□□□ 0.73
ITSN1-228ENST00000479424 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
ITSN1-228ENST00000479424 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
ITSN1-228ENST00000479424 NACADO15069 1562 aa18.55■□□□□ 0.56
ITSN1-228ENST00000479424 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
ITSN1-228ENST00000479424 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
ITSN1-228ENST00000479424 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
ITSN1-228ENST00000479424 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
ITSN1-228ENST00000479424 BICRAQ9NZM4 1560 aa18.23■□□□□ 0.51
ITSN1-228ENST00000479424 ZCCHC6Q5VYS8 1495 aaKnown RBP18.08■□□□□ 0.49
ITSN1-228ENST00000479424 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
ITSN1-228ENST00000479424 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
ITSN1-228ENST00000479424 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
ITSN1-228ENST00000479424 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
ITSN1-228ENST00000479424 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
ITSN1-228ENST00000479424 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
ITSN1-228ENST00000479424 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
ITSN1-228ENST00000479424 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
ITSN1-228ENST00000479424 DNAJC5Q9H3Z4 198 aa17.07■□□□□ 0.32
ITSN1-228ENST00000479424 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
ITSN1-228ENST00000479424 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
ITSN1-228ENST00000479424 SMARCA2P51531 1590 aa17■□□□□ 0.31
ITSN1-228ENST00000479424 CUX2O14529 1486 aa16.98■□□□□ 0.31
ITSN1-228ENST00000479424 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
ITSN1-228ENST00000479424 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
ITSN1-228ENST00000479424 NESP48681 1621 aa16.92■□□□□ 0.3
ITSN1-228ENST00000479424 PEG3Q9GZU2 1588 aa16.91■□□□□ 0.3
ITSN1-228ENST00000479424 BAZ1BQ9UIG0 1483 aaKnown RBP16.87■□□□□ 0.29
ITSN1-228ENST00000479424 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
ITSN1-228ENST00000479424 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
ITSN1-228ENST00000479424 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.27
ITSN1-228ENST00000479424 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
ITSN1-228ENST00000479424 WIZO95785 1651 aa16.65■□□□□ 0.26
ITSN1-228ENST00000479424 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
ITSN1-228ENST00000479424 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
ITSN1-228ENST00000479424 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
ITSN1-228ENST00000479424 WDR62O43379 1518 aa16.5■□□□□ 0.23
ITSN1-228ENST00000479424 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
ITSN1-228ENST00000479424 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
ITSN1-228ENST00000479424 CFTRP13569 1480 aa16.41■□□□□ 0.22
ITSN1-228ENST00000479424 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
ITSN1-228ENST00000479424 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
ITSN1-228ENST00000479424 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
ITSN1-228ENST00000479424 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
ITSN1-228ENST00000479424 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
ITSN1-228ENST00000479424 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
ITSN1-228ENST00000479424 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
ITSN1-228ENST00000479424 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
ITSN1-228ENST00000479424 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
ITSN1-228ENST00000479424 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
ITSN1-228ENST00000479424 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
ITSN1-228ENST00000479424 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
ITSN1-228ENST00000479424 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
ITSN1-228ENST00000479424 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
ITSN1-228ENST00000479424 EIF4G3O43432 1585 aaKnown RBP16.03■□□□□ 0.16
ITSN1-228ENST00000479424 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
ITSN1-228ENST00000479424 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
ITSN1-228ENST00000479424 CHD1O14646 1710 aa15.96■□□□□ 0.15
ITSN1-228ENST00000479424 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.14
ITSN1-228ENST00000479424 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
ITSN1-228ENST00000479424 POLA1P09884 1462 aaPredicted RBP15.93■□□□□ 0.14
ITSN1-228ENST00000479424 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
ITSN1-228ENST00000479424 SOGA1O94964 1423 aa15.84■□□□□ 0.13
ITSN1-228ENST00000479424 CUX1P39880 1505 aa15.83■□□□□ 0.12
ITSN1-228ENST00000479424 TDRD9Q8NDG6 1382 aaKnown RBP15.82■□□□□ 0.12
ITSN1-228ENST00000479424 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
ITSN1-228ENST00000479424 ARAP1Q96P48 1450 aa15.8■□□□□ 0.12
ITSN1-228ENST00000479424 CYB5RLQ6IPT4 315 aa15.8■□□□□ 0.12
ITSN1-228ENST00000479424 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
ITSN1-228ENST00000479424 FBLN2P98095 1184 aa15.78■□□□□ 0.12
ITSN1-228ENST00000479424 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
ITSN1-228ENST00000479424 CLASP1Q7Z460 1538 aa15.75■□□□□ 0.11
ITSN1-228ENST00000479424 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.11
ITSN1-228ENST00000479424 PBRM1Q86U86 1689 aa15.71■□□□□ 0.11
ITSN1-228ENST00000479424 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
ITSN1-228ENST00000479424 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
ITSN1-228ENST00000479424 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
ITSN1-228ENST00000479424 CHMP7Q8WUX9 453 aaPredicted RBP15.66■□□□□ 0.1
ITSN1-228ENST00000479424 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
ITSN1-228ENST00000479424 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
ITSN1-228ENST00000479424 ABCA10Q8WWZ4 1543 aa15.64■□□□□ 0.09
ITSN1-228ENST00000479424 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-228ENST00000479424 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
ITSN1-228ENST00000479424 BIVM-ERCC5R4GMW8 1640 aa15.56■□□□□ 0.08
ITSN1-228ENST00000479424 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
ITSN1-228ENST00000479424 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
ITSN1-228ENST00000479424 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
ITSN1-228ENST00000479424 GRIN2AQ12879 1464 aa15.52■□□□□ 0.08
ITSN1-228ENST00000479424 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
ITSN1-228ENST00000479424 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
ITSN1-228ENST00000479424 NUP160Q12769 1436 aa15.49■□□□□ 0.07
ITSN1-228ENST00000479424 SHROOM2Q13796 1616 aa15.46■□□□□ 0.07
ITSN1-228ENST00000479424 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
ITSN1-228ENST00000479424 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
ITSN1-228ENST00000479424 KIF13AQ9H1H9 1805 aa15.33■□□□□ 0.05
ITSN1-228ENST00000479424 PRG4Q92954 1404 aaPredicted RBP15.31■□□□□ 0.04
ITSN1-228ENST00000479424 RUSC2Q8N2Y8 1516 aa15.31■□□□□ 0.04
ITSN1-228ENST00000479424 JPH4Q96JJ6 628 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms