RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 NISCHQ9Y2I1 1504 aa35.78■■■■□ 3.32
C9orf85-205ENST00000479413 ABCC9O60706 1549 aa32.22■■■□□ 2.75
C9orf85-205ENST00000479413 CCDC180Q9P1Z9 1646 aa32.18■■■□□ 2.74
C9orf85-205ENST00000479413 RB1CC1Q8TDY2 1594 aa30.68■■■□□ 2.5
C9orf85-205ENST00000479413 NACADO15069 1562 aa30.45■■■□□ 2.46
C9orf85-205ENST00000479413 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
C9orf85-205ENST00000479413 DNAJC5BQ9UF47 199 aa30.21■■■□□ 2.43
C9orf85-205ENST00000479413 MYO15BQ96JP2 1530 aa29.99■■■□□ 2.39
C9orf85-205ENST00000479413 PABPN1Q86U42 306 aaKnown RBP eCLIP29.96■■■□□ 2.39
C9orf85-205ENST00000479413 UNC13AQ9UPW8 1703 aa29.93■■■□□ 2.38
C9orf85-205ENST00000479413 BICRAQ9NZM4 1560 aa29.72■■■□□ 2.35
C9orf85-205ENST00000479413 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
C9orf85-205ENST00000479413 DCAF1Q9Y4B6 1507 aa29.57■■■□□ 2.32
C9orf85-205ENST00000479413 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
C9orf85-205ENST00000479413 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
C9orf85-205ENST00000479413 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
C9orf85-205ENST00000479413 CECR2Q9BXF3 1484 aa29.05■■■□□ 2.24
C9orf85-205ENST00000479413 EIF4G1Q04637 1599 aaKnown RBP29.04■■■□□ 2.24
C9orf85-205ENST00000479413 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
C9orf85-205ENST00000479413 ATAD2BQ9ULI0 1458 aa27.97■■■□□ 2.07
C9orf85-205ENST00000479413 SMARCA4P51532 1647 aa27.94■■■□□ 2.06
C9orf85-205ENST00000479413 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
C9orf85-205ENST00000479413 HMGXB3Q12766 1538 aa27.89■■■□□ 2.06
C9orf85-205ENST00000479413 ERCC6Q03468 1493 aa27.88■■■□□ 2.05
C9orf85-205ENST00000479413 DNAJC5Q9H3Z4 198 aa27.86■■■□□ 2.05
C9orf85-205ENST00000479413 CUX2O14529 1486 aa27.84■■■□□ 2.05
C9orf85-205ENST00000479413 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
C9orf85-205ENST00000479413 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
C9orf85-205ENST00000479413 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
C9orf85-205ENST00000479413 NESP48681 1621 aa27.63■■■□□ 2.01
C9orf85-205ENST00000479413 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
C9orf85-205ENST00000479413 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
C9orf85-205ENST00000479413 THOC2Q8NI27 1593 aaKnown RBP27.4■■□□□ 1.98
C9orf85-205ENST00000479413 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.97
C9orf85-205ENST00000479413 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
C9orf85-205ENST00000479413 WIZO95785 1651 aa27.23■■□□□ 1.95
C9orf85-205ENST00000479413 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
C9orf85-205ENST00000479413 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
C9orf85-205ENST00000479413 WDR62O43379 1518 aa27.03■■□□□ 1.92
C9orf85-205ENST00000479413 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
C9orf85-205ENST00000479413 RSF1Q96T23 1441 aaPredicted RBP26.95■■□□□ 1.9
C9orf85-205ENST00000479413 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
C9orf85-205ENST00000479413 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
C9orf85-205ENST00000479413 CFTRP13569 1480 aa26.9■■□□□ 1.9
C9orf85-205ENST00000479413 URB2Q14146 1524 aaKnown RBP26.68■■□□□ 1.86
C9orf85-205ENST00000479413 PRDM2Q13029 1718 aa26.66■■□□□ 1.86
C9orf85-205ENST00000479413 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
C9orf85-205ENST00000479413 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
C9orf85-205ENST00000479413 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
C9orf85-205ENST00000479413 IFT140Q96RY7 1462 aa26.43■■□□□ 1.82
C9orf85-205ENST00000479413 TOPBP1Q92547 1522 aa26.39■■□□□ 1.82
C9orf85-205ENST00000479413 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
C9orf85-205ENST00000479413 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
C9orf85-205ENST00000479413 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
C9orf85-205ENST00000479413 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
C9orf85-205ENST00000479413 RIMBP3CA6NJZ7 1639 aa26.19■■□□□ 1.78
C9orf85-205ENST00000479413 RIMBP3BA6NNM3 1639 aa26.19■■□□□ 1.78
C9orf85-205ENST00000479413 RIMBP3Q9UFD9 1639 aa26.19■■□□□ 1.78
C9orf85-205ENST00000479413 TARBP1Q13395 1621 aaKnown RBP26.17■■□□□ 1.78
C9orf85-205ENST00000479413 POLA1P09884 1462 aaPredicted RBP26.12■■□□□ 1.77
C9orf85-205ENST00000479413 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.77
C9orf85-205ENST00000479413 ARHGEF11O15085 1522 aa26.11■■□□□ 1.77
C9orf85-205ENST00000479413 CHD1O14646 1710 aa26.06■■□□□ 1.76
C9orf85-205ENST00000479413 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
C9orf85-205ENST00000479413 SOGA1O94964 1423 aa26■■□□□ 1.75
C9orf85-205ENST00000479413 FBLN2P98095 1184 aa26■■□□□ 1.75
C9orf85-205ENST00000479413 FGD5Q6ZNL6 1462 aa25.95■■□□□ 1.74
C9orf85-205ENST00000479413 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
C9orf85-205ENST00000479413 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.74
C9orf85-205ENST00000479413 CYB5RLQ6IPT4 315 aa25.91■■□□□ 1.74
C9orf85-205ENST00000479413 CUX1P39880 1505 aa25.9■■□□□ 1.74
C9orf85-205ENST00000479413 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
C9orf85-205ENST00000479413 ARAP1Q96P48 1450 aa25.83■■□□□ 1.73
C9orf85-205ENST00000479413 MAGI1Q96QZ7 1491 aaPredicted RBP25.83■■□□□ 1.73
C9orf85-205ENST00000479413 GRIN2BQ13224 1484 aa25.8■■□□□ 1.72
C9orf85-205ENST00000479413 CHMP7Q8WUX9 453 aaPredicted RBP25.79■■□□□ 1.72
C9orf85-205ENST00000479413 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
C9orf85-205ENST00000479413 CLASP1Q7Z460 1538 aa25.75■■□□□ 1.71
C9orf85-205ENST00000479413 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
C9orf85-205ENST00000479413 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
C9orf85-205ENST00000479413 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
C9orf85-205ENST00000479413 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
C9orf85-205ENST00000479413 TRHP20396 242 aaPredicted RBP25.68■■□□□ 1.7
C9orf85-205ENST00000479413 ABCA10Q8WWZ4 1543 aa25.66■■□□□ 1.7
C9orf85-205ENST00000479413 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
C9orf85-205ENST00000479413 WRNQ14191 1432 aaPredicted RBP eCLIP25.56■■□□□ 1.68
C9orf85-205ENST00000479413 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
C9orf85-205ENST00000479413 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
C9orf85-205ENST00000479413 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
C9orf85-205ENST00000479413 ADAMTS12P58397 1594 aa25.45■■□□□ 1.66
C9orf85-205ENST00000479413 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
C9orf85-205ENST00000479413 NUP160Q12769 1436 aa25.37■■□□□ 1.65
C9orf85-205ENST00000479413 CEP170Q5SW79 1584 aa25.36■■□□□ 1.65
C9orf85-205ENST00000479413 ERICH3Q5RHP9 1530 aa25.35■■□□□ 1.65
C9orf85-205ENST00000479413 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
C9orf85-205ENST00000479413 SHROOM2Q13796 1616 aa25.27■■□□□ 1.64
C9orf85-205ENST00000479413 PRG4Q92954 1404 aaPredicted RBP25.14■■□□□ 1.62
C9orf85-205ENST00000479413 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
C9orf85-205ENST00000479413 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
C9orf85-205ENST00000479413 KIF27Q86VH2 1401 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms