RNA–Protein interactions for RNA: ENST00000479397.2

CNOT10-215, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-215ENST00000479397 AEBP2Q6ZN18 517 aaPredicted RBP15.51■□□□□ 0.07
CNOT10-215ENST00000479397 CHIC1Q5VXU3 224 aa14.85□□□□□ -0.03
CNOT10-215ENST00000479397 NISCHQ9Y2I1 1504 aa14.2□□□□□ -0.14
CNOT10-215ENST00000479397 ABCC9O60706 1549 aa13.33□□□□□ -0.28
CNOT10-215ENST00000479397 SENP3Q9H4L4 574 aaPredicted RBP13.16□□□□□ -0.3
CNOT10-215ENST00000479397 CCDC180Q9P1Z9 1646 aa13.07□□□□□ -0.32
CNOT10-215ENST00000479397 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
CNOT10-215ENST00000479397 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
CNOT10-215ENST00000479397 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
CNOT10-215ENST00000479397 UNC13AQ9UPW8 1703 aa12.41□□□□□ -0.42
CNOT10-215ENST00000479397 NACADO15069 1562 aa12.38□□□□□ -0.43
CNOT10-215ENST00000479397 FOXD1Q16676 465 aa12.28□□□□□ -0.44
CNOT10-215ENST00000479397 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
CNOT10-215ENST00000479397 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
CNOT10-215ENST00000479397 DNAJC5Q9H3Z4 198 aa12.14□□□□□ -0.47
CNOT10-215ENST00000479397 DCAF8L2P0C7V8 631 aa12.1□□□□□ -0.47
CNOT10-215ENST00000479397 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
CNOT10-215ENST00000479397 CECR2Q9BXF3 1484 aa12.07□□□□□ -0.48
CNOT10-215ENST00000479397 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
CNOT10-215ENST00000479397 SHROOM4Q9ULL8 1493 aa12.03□□□□□ -0.48
CNOT10-215ENST00000479397 EIF4G1Q04637 1599 aaKnown RBP11.94□□□□□ -0.5
CNOT10-215ENST00000479397 PLPPR3Q6T4P5 718 aa11.91□□□□□ -0.5
CNOT10-215ENST00000479397 SCRIBQ14160 1630 aa11.78□□□□□ -0.52
CNOT10-215ENST00000479397 DCAF1Q9Y4B6 1507 aa11.74□□□□□ -0.53
CNOT10-215ENST00000479397 CUX2O14529 1486 aa11.72□□□□□ -0.53
CNOT10-215ENST00000479397 ZCCHC6Q5VYS8 1495 aaKnown RBP11.67□□□□□ -0.54
CNOT10-215ENST00000479397 PPP6R1Q9UPN7 881 aa11.62□□□□□ -0.55
CNOT10-215ENST00000479397 ERCC6Q03468 1493 aa11.58□□□□□ -0.56
CNOT10-215ENST00000479397 ADRA2BP18089 450 aa11.58□□□□□ -0.56
CNOT10-215ENST00000479397 PIAS4Q8N2W9 510 aaPredicted RBP11.5□□□□□ -0.57
CNOT10-215ENST00000479397 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
CNOT10-215ENST00000479397 MSH5O43196 834 aa11.4□□□□□ -0.58
CNOT10-215ENST00000479397 THOC2Q8NI27 1593 aaKnown RBP11.37□□□□□ -0.59
CNOT10-215ENST00000479397 NCAPD3P42695 1498 aa11.37□□□□□ -0.59
CNOT10-215ENST00000479397 NESP48681 1621 aa11.31□□□□□ -0.6
CNOT10-215ENST00000479397 HMGXB3Q12766 1538 aa11.31□□□□□ -0.6
CNOT10-215ENST00000479397 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
CNOT10-215ENST00000479397 SMARCA2P51531 1590 aa11.28□□□□□ -0.6
CNOT10-215ENST00000479397 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.61
CNOT10-215ENST00000479397 ATAD2BQ9ULI0 1458 aa11.26□□□□□ -0.61
CNOT10-215ENST00000479397 SMARCA4P51532 1647 aa11.22□□□□□ -0.61
CNOT10-215ENST00000479397 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
CNOT10-215ENST00000479397 BAZ1BQ9UIG0 1483 aaKnown RBP11.17□□□□□ -0.62
CNOT10-215ENST00000479397 PDS5BQ9NTI5 1447 aa11.16□□□□□ -0.62
CNOT10-215ENST00000479397 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
CNOT10-215ENST00000479397 WDR62O43379 1518 aa11.09□□□□□ -0.63
CNOT10-215ENST00000479397 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
CNOT10-215ENST00000479397 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
CNOT10-215ENST00000479397 RIMBP3CA6NJZ7 1639 aa11.05□□□□□ -0.64
CNOT10-215ENST00000479397 RIMBP3BA6NNM3 1639 aa11.05□□□□□ -0.64
CNOT10-215ENST00000479397 RIMBP3Q9UFD9 1639 aa11.05□□□□□ -0.64
CNOT10-215ENST00000479397 CADPSQ9ULU8 1353 aa10.99□□□□□ -0.65
CNOT10-215ENST00000479397 CEP164Q9UPV0 1460 aa10.97□□□□□ -0.65
CNOT10-215ENST00000479397 ARHGEF11O15085 1522 aa10.92□□□□□ -0.66
CNOT10-215ENST00000479397 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.66
CNOT10-215ENST00000479397 POTEDQ86YR6 584 aa10.9□□□□□ -0.66
CNOT10-215ENST00000479397 FANCD2Q9BXW9 1451 aa10.89□□□□□ -0.67
CNOT10-215ENST00000479397 PRDM2Q13029 1718 aa10.88□□□□□ -0.67
CNOT10-215ENST00000479397 TRHP20396 242 aaPredicted RBP10.85□□□□□ -0.67
CNOT10-215ENST00000479397 WIZO95785 1651 aa10.82□□□□□ -0.68
CNOT10-215ENST00000479397 CHD1O14646 1710 aa10.82□□□□□ -0.68
CNOT10-215ENST00000479397 URB2Q14146 1524 aaKnown RBP10.82□□□□□ -0.68
CNOT10-215ENST00000479397 CYB5RLQ6IPT4 315 aa10.8□□□□□ -0.68
CNOT10-215ENST00000479397 CFTRP13569 1480 aa10.79□□□□□ -0.68
CNOT10-215ENST00000479397 ARAP1Q96P48 1450 aa10.75□□□□□ -0.69
CNOT10-215ENST00000479397 IFT140Q96RY7 1462 aa10.75□□□□□ -0.69
CNOT10-215ENST00000479397 EIF4G3O43432 1585 aaKnown RBP10.75□□□□□ -0.69
CNOT10-215ENST00000479397 ZNF608Q9ULD9 1512 aaPredicted RBP10.74□□□□□ -0.69
CNOT10-215ENST00000479397 RSF1Q96T23 1441 aaPredicted RBP10.71□□□□□ -0.69
CNOT10-215ENST00000479397 ABCC8Q09428 1581 aa10.65□□□□□ -0.71
CNOT10-215ENST00000479397 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
CNOT10-215ENST00000479397 TOP2AP11388 1531 aaKnown RBP10.63□□□□□ -0.71
CNOT10-215ENST00000479397 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
CNOT10-215ENST00000479397 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
CNOT10-215ENST00000479397 FBLN2P98095 1184 aa10.6□□□□□ -0.71
CNOT10-215ENST00000479397 MAPK8IP2Q13387 824 aaPredicted RBP10.6□□□□□ -0.71
CNOT10-215ENST00000479397 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
CNOT10-215ENST00000479397 SYNJ1O43426 1573 aa10.58□□□□□ -0.72
CNOT10-215ENST00000479397 AQRO60306 1485 aaKnown RBP eCLIP10.57□□□□□ -0.725e-7■■■□□ 17.2
CNOT10-215ENST00000479397 WDR97A6NE52 1622 aa10.55□□□□□ -0.72
CNOT10-215ENST00000479397 SCAF1Q9H7N4 1312 aaKnown RBP10.54□□□□□ -0.72
CNOT10-215ENST00000479397 KIF13AQ9H1H9 1805 aa10.51□□□□□ -0.73
CNOT10-215ENST00000479397 POLA1P09884 1462 aaPredicted RBP10.49□□□□□ -0.73
CNOT10-215ENST00000479397 SNAPC4Q5SXM2 1469 aa10.49□□□□□ -0.73
CNOT10-215ENST00000479397 MAGI1Q96QZ7 1491 aaPredicted RBP10.49□□□□□ -0.73
CNOT10-215ENST00000479397 PPP4R3CPQ6ZMV5 832 aa10.48□□□□□ -0.73
CNOT10-215ENST00000479397 DMRT2Q9Y5R5 561 aa10.48□□□□□ -0.73
CNOT10-215ENST00000479397 GAPVD1Q14C86 1478 aa10.48□□□□□ -0.73
CNOT10-215ENST00000479397 CCDC88BA6NC98 1476 aa10.47□□□□□ -0.73
CNOT10-215ENST00000479397 PBRM1Q86U86 1689 aa10.47□□□□□ -0.73
CNOT10-215ENST00000479397 CHMP7Q8WUX9 453 aaPredicted RBP10.46□□□□□ -0.73
CNOT10-215ENST00000479397 SYNJ2O15056 1496 aa10.43□□□□□ -0.74
CNOT10-215ENST00000479397 ILDR1Q86SU0 546 aaPredicted RBP10.43□□□□□ -0.74
CNOT10-215ENST00000479397 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
CNOT10-215ENST00000479397 SOGA1O94964 1423 aa10.42□□□□□ -0.74
CNOT10-215ENST00000479397 TDRD9Q8NDG6 1382 aaKnown RBP10.42□□□□□ -0.74
CNOT10-215ENST00000479397 GRIN2BQ13224 1484 aa10.41□□□□□ -0.74
CNOT10-215ENST00000479397 FGD5Q6ZNL6 1462 aa10.37□□□□□ -0.75
CNOT10-215ENST00000479397 ERCC6L2Q5T890 1561 aa10.35□□□□□ -0.75
CNOT10-215ENST00000479397 CEP170Q5SW79 1584 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms