RNA–Protein interactions for RNA: ENST00000479389.1

RIPK1-203, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

TSL 3

Gene RIPK1, Length 1,481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-203ENST00000479389 NISCHQ9Y2I1 1504 aa40.34■■■■■ 4.05
RIPK1-203ENST00000479389 CCDC180Q9P1Z9 1646 aa36.14■■■■□ 3.38
RIPK1-203ENST00000479389 ABCC9O60706 1549 aa35.8■■■■□ 3.32
RIPK1-203ENST00000479389 RB1CC1Q8TDY2 1594 aa34.24■■■■□ 3.07
RIPK1-203ENST00000479389 NACADO15069 1562 aa34.06■■■■□ 3.04
RIPK1-203ENST00000479389 DCAF8L2P0C7V8 631 aa33.92■■■■□ 3.02
RIPK1-203ENST00000479389 MYO15BQ96JP2 1530 aa33.68■■■□□ 2.98
RIPK1-203ENST00000479389 UNC13AQ9UPW8 1703 aa33.51■■■□□ 2.96
RIPK1-203ENST00000479389 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
RIPK1-203ENST00000479389 DCAF1Q9Y4B6 1507 aa33.35■■■□□ 2.93
RIPK1-203ENST00000479389 PABPN1Q86U42 306 aaKnown RBP eCLIP33.35■■■□□ 2.93
RIPK1-203ENST00000479389 DNAJC5BQ9UF47 199 aa33.27■■■□□ 2.92
RIPK1-203ENST00000479389 BICRAQ9NZM4 1560 aa33.2■■■□□ 2.91
RIPK1-203ENST00000479389 SCRIBQ14160 1630 aa32.92■■■□□ 2.86
RIPK1-203ENST00000479389 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
RIPK1-203ENST00000479389 CC2D2AQ9P2K1 1620 aa32.38■■■□□ 2.77
RIPK1-203ENST00000479389 EIF4G1Q04637 1599 aaKnown RBP32.37■■■□□ 2.77
RIPK1-203ENST00000479389 CECR2Q9BXF3 1484 aa32.22■■■□□ 2.75
RIPK1-203ENST00000479389 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
RIPK1-203ENST00000479389 NCAPD3P42695 1498 aa31.41■■■□□ 2.62
RIPK1-203ENST00000479389 ATAD2BQ9ULI0 1458 aa31.35■■■□□ 2.61
RIPK1-203ENST00000479389 SMARCA2P51531 1590 aa31.32■■■□□ 2.6
RIPK1-203ENST00000479389 BAZ1AQ9NRL2 1556 aaPredicted RBP31.32■■■□□ 2.6
RIPK1-203ENST00000479389 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
RIPK1-203ENST00000479389 PEG3Q9GZU2 1588 aa31.12■■■□□ 2.57
RIPK1-203ENST00000479389 BAZ1BQ9UIG0 1483 aaKnown RBP31.1■■■□□ 2.57
RIPK1-203ENST00000479389 MROH2BQ7Z745 1585 aa31.08■■■□□ 2.57
RIPK1-203ENST00000479389 ERCC6Q03468 1493 aa30.91■■■□□ 2.54
RIPK1-203ENST00000479389 NESP48681 1621 aa30.83■■■□□ 2.53
RIPK1-203ENST00000479389 WIZO95785 1651 aa30.75■■■□□ 2.51
RIPK1-203ENST00000479389 CUX2O14529 1486 aa30.75■■■□□ 2.51
RIPK1-203ENST00000479389 LAMC3Q9Y6N6 1575 aa30.7■■■□□ 2.5
RIPK1-203ENST00000479389 RSF1Q96T23 1441 aaPredicted RBP30.53■■■□□ 2.48
RIPK1-203ENST00000479389 KIF21AQ7Z4S6 1674 aa30.5■■■□□ 2.47
RIPK1-203ENST00000479389 THOC2Q8NI27 1593 aaKnown RBP30.49■■■□□ 2.47
RIPK1-203ENST00000479389 PDS5BQ9NTI5 1447 aa30.49■■■□□ 2.47
RIPK1-203ENST00000479389 CADPSQ9ULU8 1353 aa30.47■■■□□ 2.47
RIPK1-203ENST00000479389 TOP2AP11388 1531 aaKnown RBP30.38■■■□□ 2.45
RIPK1-203ENST00000479389 DNAJC5Q9H3Z4 198 aa30.37■■■□□ 2.45
RIPK1-203ENST00000479389 MRC2Q9UBG0 1479 aa30.21■■■□□ 2.43
RIPK1-203ENST00000479389 CFTRP13569 1480 aa30.19■■■□□ 2.42
RIPK1-203ENST00000479389 CEP164Q9UPV0 1460 aa30.16■■■□□ 2.42
RIPK1-203ENST00000479389 FANCD2Q9BXW9 1451 aa30.13■■■□□ 2.41
RIPK1-203ENST00000479389 WDR62O43379 1518 aa30.13■■■□□ 2.41
RIPK1-203ENST00000479389 PRDM2Q13029 1718 aa30.02■■■□□ 2.4
RIPK1-203ENST00000479389 CCDC88BA6NC98 1476 aa30.01■■■□□ 2.39
RIPK1-203ENST00000479389 URB2Q14146 1524 aaKnown RBP29.87■■■□□ 2.37
RIPK1-203ENST00000479389 TOPBP1Q92547 1522 aa29.6■■■□□ 2.33
RIPK1-203ENST00000479389 ABCC8Q09428 1581 aa29.58■■■□□ 2.33
RIPK1-203ENST00000479389 DNMBPQ6XZF7 1577 aa29.54■■■□□ 2.32
RIPK1-203ENST00000479389 IFT140Q96RY7 1462 aa29.54■■■□□ 2.32
RIPK1-203ENST00000479389 ZNF608Q9ULD9 1512 aaPredicted RBP29.44■■■□□ 2.3
RIPK1-203ENST00000479389 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
RIPK1-203ENST00000479389 OSCARQ8IYS5 282 aa29.38■■■□□ 2.29
RIPK1-203ENST00000479389 EIF4G3O43432 1585 aaKnown RBP29.34■■■□□ 2.29
RIPK1-203ENST00000479389 TARBP1Q13395 1621 aaKnown RBP29.33■■■□□ 2.29
RIPK1-203ENST00000479389 POLA1P09884 1462 aaPredicted RBP29.31■■■□□ 2.28
RIPK1-203ENST00000479389 AQRO60306 1485 aaKnown RBP eCLIP29.22■■■□□ 2.27
RIPK1-203ENST00000479389 CUX1P39880 1505 aa29.2■■■□□ 2.26
RIPK1-203ENST00000479389 RAD54L2Q9Y4B4 1467 aa29.19■■■□□ 2.26
RIPK1-203ENST00000479389 SOGA1O94964 1423 aa29.18■■■□□ 2.26
RIPK1-203ENST00000479389 FGD5Q6ZNL6 1462 aa29.18■■■□□ 2.26
RIPK1-203ENST00000479389 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
RIPK1-203ENST00000479389 CHD1O14646 1710 aa29.1■■■□□ 2.25
RIPK1-203ENST00000479389 WDR97A6NE52 1622 aa29.08■■■□□ 2.25
RIPK1-203ENST00000479389 TDRD9Q8NDG6 1382 aaKnown RBP29.07■■■□□ 2.24
RIPK1-203ENST00000479389 RIMBP3CA6NJZ7 1639 aa29■■■□□ 2.23
RIPK1-203ENST00000479389 RIMBP3BA6NNM3 1639 aa29■■■□□ 2.23
RIPK1-203ENST00000479389 RIMBP3Q9UFD9 1639 aa29■■■□□ 2.23
RIPK1-203ENST00000479389 FBLN2P98095 1184 aa28.98■■■□□ 2.23
RIPK1-203ENST00000479389 SNAPC4Q5SXM2 1469 aa28.94■■■□□ 2.22
RIPK1-203ENST00000479389 ARHGEF11O15085 1522 aa28.92■■■□□ 2.22
RIPK1-203ENST00000479389 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
RIPK1-203ENST00000479389 MAGI1Q96QZ7 1491 aaPredicted RBP28.89■■■□□ 2.21
RIPK1-203ENST00000479389 PBRM1Q86U86 1689 aa28.87■■■□□ 2.21
RIPK1-203ENST00000479389 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
RIPK1-203ENST00000479389 BIVM-ERCC5R4GMW8 1640 aa28.85■■■□□ 2.21
RIPK1-203ENST00000479389 GAPVD1Q14C86 1478 aa28.84■■■□□ 2.21
RIPK1-203ENST00000479389 TOP2BQ02880 1626 aa28.83■■■□□ 2.21
RIPK1-203ENST00000479389 ABCA5Q8WWZ7 1642 aa28.82■■■□□ 2.2
RIPK1-203ENST00000479389 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.2
RIPK1-203ENST00000479389 CHMP7Q8WUX9 453 aaPredicted RBP28.81■■■□□ 2.2
RIPK1-203ENST00000479389 SYNJ1O43426 1573 aa28.79■■■□□ 2.2
RIPK1-203ENST00000479389 SYNJ2O15056 1496 aa28.78■■■□□ 2.2
RIPK1-203ENST00000479389 CLASP1Q7Z460 1538 aa28.72■■■□□ 2.19
RIPK1-203ENST00000479389 CYB5RLQ6IPT4 315 aa28.66■■■□□ 2.18
RIPK1-203ENST00000479389 ARAP1Q96P48 1450 aa28.64■■■□□ 2.18
RIPK1-203ENST00000479389 ADAMTS12P58397 1594 aa28.58■■■□□ 2.17
RIPK1-203ENST00000479389 GRIN2AQ12879 1464 aa28.54■■■□□ 2.16
RIPK1-203ENST00000479389 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
RIPK1-203ENST00000479389 FHAD1B1AJZ9 1412 aa28.48■■■□□ 2.15
RIPK1-203ENST00000479389 CEP170Q5SW79 1584 aa28.43■■■□□ 2.14
RIPK1-203ENST00000479389 NUP160Q12769 1436 aa28.42■■■□□ 2.14
RIPK1-203ENST00000479389 SHROOM2Q13796 1616 aa28.29■■■□□ 2.12
RIPK1-203ENST00000479389 ERCC6L2Q5T890 1561 aa28.28■■■□□ 2.12
RIPK1-203ENST00000479389 TRHP20396 242 aaPredicted RBP28.27■■■□□ 2.12
RIPK1-203ENST00000479389 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
RIPK1-203ENST00000479389 CUL7Q14999 1698 aa28.19■■■□□ 2.1
RIPK1-203ENST00000479389 IGF1RP08069 1367 aa28.18■■■□□ 2.1
RIPK1-203ENST00000479389 RUSC2Q8N2Y8 1516 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms