RNA–Protein interactions for RNA: ENST00000479294.2

SRRM3-203, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 2

Gene SRRM3, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-203ENST00000479294 NISCHQ9Y2I1 1504 aa55.47■■■■■ 6.47
SRRM3-203ENST00000479294 CCDC180Q9P1Z9 1646 aa49.34■■■■■ 5.49
SRRM3-203ENST00000479294 ABCC9O60706 1549 aa48.73■■■■■ 5.39
SRRM3-203ENST00000479294 RB1CC1Q8TDY2 1594 aa46.68■■■■■ 5.06
SRRM3-203ENST00000479294 DCAF8L2P0C7V8 631 aa46.6■■■■■ 5.05
SRRM3-203ENST00000479294 NACADO15069 1562 aa46.56■■■■■ 5.04
SRRM3-203ENST00000479294 MYO15BQ96JP2 1530 aa46.21■■■■■ 4.99
SRRM3-203ENST00000479294 ZCCHC6Q5VYS8 1495 aaKnown RBP46.12■■■■■ 4.97
SRRM3-203ENST00000479294 DCAF1Q9Y4B6 1507 aa45.87■■■■■ 4.93
SRRM3-203ENST00000479294 PABPN1Q86U42 306 aaKnown RBP eCLIP45.55■■■■■ 4.88
SRRM3-203ENST00000479294 UNC13AQ9UPW8 1703 aa45.41■■■■■ 4.86
SRRM3-203ENST00000479294 BICRAQ9NZM4 1560 aa45.24■■■■■ 4.83
SRRM3-203ENST00000479294 DNAJC5BQ9UF47 199 aa45.08■■■■■ 4.81
SRRM3-203ENST00000479294 SCRIBQ14160 1630 aa45.04■■■■■ 4.8
SRRM3-203ENST00000479294 SHROOM4Q9ULL8 1493 aa44.81■■■■■ 4.76
SRRM3-203ENST00000479294 EIF4G1Q04637 1599 aaKnown RBP44.11■■■■■ 4.65
SRRM3-203ENST00000479294 CC2D2AQ9P2K1 1620 aa43.99■■■■■ 4.63
SRRM3-203ENST00000479294 CECR2Q9BXF3 1484 aa43.83■■■■■ 4.61
SRRM3-203ENST00000479294 SMARCA4P51532 1647 aa43.04■■■■■ 4.48
SRRM3-203ENST00000479294 NCAPD3P42695 1498 aa43.03■■■■■ 4.48
SRRM3-203ENST00000479294 BAZ1AQ9NRL2 1556 aaPredicted RBP43■■■■■ 4.47
SRRM3-203ENST00000479294 ATAD2BQ9ULI0 1458 aa42.99■■■■■ 4.47
SRRM3-203ENST00000479294 SMARCA2P51531 1590 aa42.88■■■■■ 4.45
SRRM3-203ENST00000479294 MROH2BQ7Z745 1585 aa42.73■■■■■ 4.43
SRRM3-203ENST00000479294 HMGXB3Q12766 1538 aa42.71■■■■■ 4.43
SRRM3-203ENST00000479294 PEG3Q9GZU2 1588 aa42.65■■■■■ 4.42
SRRM3-203ENST00000479294 BAZ1BQ9UIG0 1483 aaKnown RBP42.61■■■■■ 4.41
SRRM3-203ENST00000479294 RSF1Q96T23 1441 aaPredicted RBP42.19■■■■■ 4.34
SRRM3-203ENST00000479294 WIZO95785 1651 aa42.19■■■■■ 4.34
SRRM3-203ENST00000479294 ERCC6Q03468 1493 aa42.04■■■■■ 4.32
SRRM3-203ENST00000479294 NESP48681 1621 aa42.04■■■■■ 4.32
SRRM3-203ENST00000479294 LAMC3Q9Y6N6 1575 aa41.87■■■■■ 4.29
SRRM3-203ENST00000479294 CADPSQ9ULU8 1353 aa41.78■■■■■ 4.28
SRRM3-203ENST00000479294 TOP2AP11388 1531 aaKnown RBP41.77■■■■■ 4.28
SRRM3-203ENST00000479294 PDS5BQ9NTI5 1447 aa41.7■■■■■ 4.27
SRRM3-203ENST00000479294 CUX2O14529 1486 aa41.69■■■■■ 4.26
SRRM3-203ENST00000479294 CFTRP13569 1480 aa41.43■■■■■ 4.22
SRRM3-203ENST00000479294 KIF21AQ7Z4S6 1674 aa41.4■■■■■ 4.22
SRRM3-203ENST00000479294 THOC2Q8NI27 1593 aaKnown RBP41.4■■■■■ 4.22
SRRM3-203ENST00000479294 CCDC88BA6NC98 1476 aa41.34■■■■■ 4.21
SRRM3-203ENST00000479294 FANCD2Q9BXW9 1451 aa41.26■■■■■ 4.2
SRRM3-203ENST00000479294 MRC2Q9UBG0 1479 aa41.24■■■■■ 4.19
SRRM3-203ENST00000479294 CEP164Q9UPV0 1460 aa41.22■■■■■ 4.19
SRRM3-203ENST00000479294 WDR62O43379 1518 aa41.08■■■■■ 4.17
SRRM3-203ENST00000479294 SUPT5HO00267 1087 aaKnown RBP40.93■■■■■ 4.14
SRRM3-203ENST00000479294 DNAJC5Q9H3Z4 198 aa40.88■■■■■ 4.13
SRRM3-203ENST00000479294 URB2Q14146 1524 aaKnown RBP40.84■■■■■ 4.13
SRRM3-203ENST00000479294 PRDM2Q13029 1718 aa40.83■■■■■ 4.13
SRRM3-203ENST00000479294 ABCC8Q09428 1581 aa40.56■■■■■ 4.08
SRRM3-203ENST00000479294 TOPBP1Q92547 1522 aa40.54■■■■■ 4.08
SRRM3-203ENST00000479294 DNMBPQ6XZF7 1577 aa40.44■■■■■ 4.06
SRRM3-203ENST00000479294 IFT140Q96RY7 1462 aa40.4■■■■■ 4.06
SRRM3-203ENST00000479294 ZNF608Q9ULD9 1512 aaPredicted RBP40.22■■■■■ 4.03
SRRM3-203ENST00000479294 POLA1P09884 1462 aaPredicted RBP40.19■■■■■ 4.02
SRRM3-203ENST00000479294 CUX1P39880 1505 aa40.1■■■■■ 4.01
SRRM3-203ENST00000479294 SOGA1O94964 1423 aa40.07■■■■■ 4
SRRM3-203ENST00000479294 TARBP1Q13395 1621 aaKnown RBP40.06■■■■■ 4
SRRM3-203ENST00000479294 FGD5Q6ZNL6 1462 aa40.04■■■■■ 4
SRRM3-203ENST00000479294 RAD54L2Q9Y4B4 1467 aa40.03■■■■■ 4
SRRM3-203ENST00000479294 OSCARQ8IYS5 282 aa40.01■■■■■ 4
SRRM3-203ENST00000479294 AQRO60306 1485 aaKnown RBP eCLIP39.99■■■■□ 3.99
SRRM3-203ENST00000479294 EIF4G3O43432 1585 aaKnown RBP39.97■■■■□ 3.99
SRRM3-203ENST00000479294 TDRD9Q8NDG6 1382 aaKnown RBP39.89■■■■□ 3.98
SRRM3-203ENST00000479294 WRNQ14191 1432 aaPredicted RBP eCLIP39.79■■■■□ 3.96
SRRM3-203ENST00000479294 WDR97A6NE52 1622 aa39.75■■■■□ 3.95
SRRM3-203ENST00000479294 TOP2BQ02880 1626 aa39.64■■■■□ 3.94
SRRM3-203ENST00000479294 ABCA10Q8WWZ4 1543 aa39.64■■■■□ 3.94
SRRM3-203ENST00000479294 FBLN2P98095 1184 aa39.63■■■■□ 3.93
SRRM3-203ENST00000479294 GRIN2BQ13224 1484 aa39.62■■■■□ 3.93
SRRM3-203ENST00000479294 SYNJ1O43426 1573 aa39.61■■■■□ 3.93
SRRM3-203ENST00000479294 BIVM-ERCC5R4GMW8 1640 aa39.59■■■■□ 3.93
SRRM3-203ENST00000479294 SNAPC4Q5SXM2 1469 aa39.58■■■■□ 3.93
SRRM3-203ENST00000479294 GAPVD1Q14C86 1478 aa39.56■■■■□ 3.92
SRRM3-203ENST00000479294 MAGI1Q96QZ7 1491 aaPredicted RBP39.53■■■■□ 3.92
SRRM3-203ENST00000479294 CHMP7Q8WUX9 453 aaPredicted RBP39.49■■■■□ 3.91
SRRM3-203ENST00000479294 CHD1O14646 1710 aa39.45■■■■□ 3.91
SRRM3-203ENST00000479294 ABCA5Q8WWZ7 1642 aa39.43■■■■□ 3.9
SRRM3-203ENST00000479294 TRIM41Q8WV44 630 aa39.39■■■■□ 3.9
SRRM3-203ENST00000479294 SYNJ2O15056 1496 aa39.38■■■■□ 3.9
SRRM3-203ENST00000479294 PBRM1Q86U86 1689 aa39.32■■■■□ 3.89
SRRM3-203ENST00000479294 ARHGEF11O15085 1522 aa39.24■■■■□ 3.87
SRRM3-203ENST00000479294 RIMBP3CA6NJZ7 1639 aa39.22■■■■□ 3.87
SRRM3-203ENST00000479294 RIMBP3BA6NNM3 1639 aa39.22■■■■□ 3.87
SRRM3-203ENST00000479294 RIMBP3Q9UFD9 1639 aa39.22■■■■□ 3.87
SRRM3-203ENST00000479294 ERICH3Q5RHP9 1530 aa39.14■■■■□ 3.86
SRRM3-203ENST00000479294 CLASP1Q7Z460 1538 aa39.13■■■■□ 3.85
SRRM3-203ENST00000479294 FHAD1B1AJZ9 1412 aa39.12■■■■□ 3.85
SRRM3-203ENST00000479294 ADAMTS12P58397 1594 aa39.09■■■■□ 3.85
SRRM3-203ENST00000479294 GRIN2AQ12879 1464 aa39.08■■■■□ 3.85
SRRM3-203ENST00000479294 CYB5RLQ6IPT4 315 aa39.01■■■■□ 3.84
SRRM3-203ENST00000479294 KIF27Q86VH2 1401 aa39■■■■□ 3.83
SRRM3-203ENST00000479294 NUP160Q12769 1436 aa38.94■■■■□ 3.82
SRRM3-203ENST00000479294 ARAP1Q96P48 1450 aa38.92■■■■□ 3.82
SRRM3-203ENST00000479294 IGF1RP08069 1367 aa38.9■■■■□ 3.82
SRRM3-203ENST00000479294 CEP170Q5SW79 1584 aa38.85■■■■□ 3.81
SRRM3-203ENST00000479294 CUL7Q14999 1698 aa38.66■■■■□ 3.78
SRRM3-203ENST00000479294 CARMIL1Q5VZK9 1371 aa38.65■■■■□ 3.78
SRRM3-203ENST00000479294 JPH4Q96JJ6 628 aa38.61■■■■□ 3.77
SRRM3-203ENST00000479294 SHROOM2Q13796 1616 aa38.58■■■■□ 3.77
SRRM3-203ENST00000479294 ERCC6L2Q5T890 1561 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms