RNA–Protein interactions for RNA: ENST00000479215.1

ITCH-204, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene ITCH, Length 205 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-204ENST00000479215 NISCHQ9Y2I1 1504 aa22.55■■□□□ 1.2
ITCH-204ENST00000479215 ABCC9O60706 1549 aa20.71■□□□□ 0.91
ITCH-204ENST00000479215 CCDC180Q9P1Z9 1646 aa20.34■□□□□ 0.85
ITCH-204ENST00000479215 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
ITCH-204ENST00000479215 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
ITCH-204ENST00000479215 NACADO15069 1562 aa19.4■□□□□ 0.7
ITCH-204ENST00000479215 DCAF8L2P0C7V8 631 aa19.32■□□□□ 0.68
ITCH-204ENST00000479215 PABPN1Q86U42 306 aaKnown RBP eCLIP19.28■□□□□ 0.68
ITCH-204ENST00000479215 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
ITCH-204ENST00000479215 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
ITCH-204ENST00000479215 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
ITCH-204ENST00000479215 SHROOM4Q9ULL8 1493 aa18.83■□□□□ 0.6
ITCH-204ENST00000479215 CECR2Q9BXF3 1484 aa18.75■□□□□ 0.59
ITCH-204ENST00000479215 CC2D2AQ9P2K1 1620 aa18.67■□□□□ 0.58
ITCH-204ENST00000479215 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.58
ITCH-204ENST00000479215 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.57
ITCH-204ENST00000479215 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
ITCH-204ENST00000479215 DNAJC5Q9H3Z4 198 aa18.52■□□□□ 0.56
ITCH-204ENST00000479215 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
ITCH-204ENST00000479215 CUX2O14529 1486 aa18.08■□□□□ 0.49
ITCH-204ENST00000479215 ERCC6Q03468 1493 aa18■□□□□ 0.47
ITCH-204ENST00000479215 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
ITCH-204ENST00000479215 ATAD2BQ9ULI0 1458 aa17.78■□□□□ 0.44
ITCH-204ENST00000479215 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
ITCH-204ENST00000479215 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
ITCH-204ENST00000479215 NESP48681 1621 aa17.65■□□□□ 0.42
ITCH-204ENST00000479215 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
ITCH-204ENST00000479215 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
ITCH-204ENST00000479215 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
ITCH-204ENST00000479215 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
ITCH-204ENST00000479215 LAMC3Q9Y6N6 1575 aa17.55■□□□□ 0.4
ITCH-204ENST00000479215 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
ITCH-204ENST00000479215 THOC2Q8NI27 1593 aaKnown RBP17.5■□□□□ 0.39
ITCH-204ENST00000479215 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
ITCH-204ENST00000479215 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
ITCH-204ENST00000479215 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
ITCH-204ENST00000479215 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
ITCH-204ENST00000479215 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
ITCH-204ENST00000479215 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
ITCH-204ENST00000479215 WDR62O43379 1518 aa17.26■□□□□ 0.35
ITCH-204ENST00000479215 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
ITCH-204ENST00000479215 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
ITCH-204ENST00000479215 CFTRP13569 1480 aa17.08■□□□□ 0.32
ITCH-204ENST00000479215 WIZO95785 1651 aa17.05■□□□□ 0.32
ITCH-204ENST00000479215 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
ITCH-204ENST00000479215 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
ITCH-204ENST00000479215 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
ITCH-204ENST00000479215 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
ITCH-204ENST00000479215 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
ITCH-204ENST00000479215 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
ITCH-204ENST00000479215 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
ITCH-204ENST00000479215 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
ITCH-204ENST00000479215 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
ITCH-204ENST00000479215 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
ITCH-204ENST00000479215 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
ITCH-204ENST00000479215 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
ITCH-204ENST00000479215 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
ITCH-204ENST00000479215 FBLN2P98095 1184 aa16.73■□□□□ 0.27
ITCH-204ENST00000479215 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
ITCH-204ENST00000479215 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
ITCH-204ENST00000479215 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
ITCH-204ENST00000479215 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.263e-6■■■■□ 24.7
ITCH-204ENST00000479215 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
ITCH-204ENST00000479215 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
ITCH-204ENST00000479215 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
ITCH-204ENST00000479215 CHMP7Q8WUX9 453 aaPredicted RBP16.58■□□□□ 0.24
ITCH-204ENST00000479215 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
ITCH-204ENST00000479215 CHD1O14646 1710 aa16.56■□□□□ 0.24
ITCH-204ENST00000479215 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
ITCH-204ENST00000479215 SOGA1O94964 1423 aa16.55■□□□□ 0.24
ITCH-204ENST00000479215 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
ITCH-204ENST00000479215 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
ITCH-204ENST00000479215 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
ITCH-204ENST00000479215 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
ITCH-204ENST00000479215 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
ITCH-204ENST00000479215 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
ITCH-204ENST00000479215 GRIN2BQ13224 1484 aa16.44■□□□□ 0.22
ITCH-204ENST00000479215 CLASP1Q7Z460 1538 aa16.44■□□□□ 0.22
ITCH-204ENST00000479215 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
ITCH-204ENST00000479215 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
ITCH-204ENST00000479215 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
ITCH-204ENST00000479215 CUX1P39880 1505 aa16.29■□□□□ 0.2
ITCH-204ENST00000479215 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
ITCH-204ENST00000479215 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
ITCH-204ENST00000479215 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
ITCH-204ENST00000479215 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
ITCH-204ENST00000479215 NUP160Q12769 1436 aa16.15■□□□□ 0.18
ITCH-204ENST00000479215 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
ITCH-204ENST00000479215 NPM1P06748 294 aaKnown RBP eCLIP16.14■□□□□ 0.17
ITCH-204ENST00000479215 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
ITCH-204ENST00000479215 CEP170Q5SW79 1584 aa16.12■□□□□ 0.17
ITCH-204ENST00000479215 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
ITCH-204ENST00000479215 JPH4Q96JJ6 628 aa16.08■□□□□ 0.16
ITCH-204ENST00000479215 FAM69CQ0P6D2 419 aa16.07■□□□□ 0.16
ITCH-204ENST00000479215 ADAMTS12P58397 1594 aa16.06■□□□□ 0.16
ITCH-204ENST00000479215 PRG4Q92954 1404 aaPredicted RBP16.05■□□□□ 0.16
ITCH-204ENST00000479215 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
ITCH-204ENST00000479215 ERICH3Q5RHP9 1530 aa16.03■□□□□ 0.16
ITCH-204ENST00000479215 ABCC10Q5T3U5 1492 aa16■□□□□ 0.15
ITCH-204ENST00000479215 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 266.7 ms