RNA–Protein interactions for RNA: ENST00000479072.5

PGAP2-219, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 3 BASIC

Gene PGAP2, Length 894 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-219ENST00000479072 NISCHQ9Y2I1 1504 aa29.92■■■□□ 2.38
PGAP2-219ENST00000479072 ABCC9O60706 1549 aa27.31■■□□□ 1.96
PGAP2-219ENST00000479072 CCDC180Q9P1Z9 1646 aa27.02■■□□□ 1.92
PGAP2-219ENST00000479072 RB1CC1Q8TDY2 1594 aa25.88■■□□□ 1.73
PGAP2-219ENST00000479072 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
PGAP2-219ENST00000479072 NACADO15069 1562 aa25.62■■□□□ 1.69
PGAP2-219ENST00000479072 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
PGAP2-219ENST00000479072 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
PGAP2-219ENST00000479072 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
PGAP2-219ENST00000479072 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
PGAP2-219ENST00000479072 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
PGAP2-219ENST00000479072 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
PGAP2-219ENST00000479072 ZCCHC6Q5VYS8 1495 aaKnown RBP24.73■■□□□ 1.55
PGAP2-219ENST00000479072 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
PGAP2-219ENST00000479072 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
PGAP2-219ENST00000479072 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.54
PGAP2-219ENST00000479072 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
PGAP2-219ENST00000479072 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
PGAP2-219ENST00000479072 DNAJC5Q9H3Z4 198 aa24.02■■□□□ 1.44
PGAP2-219ENST00000479072 CUX2O14529 1486 aa23.68■■□□□ 1.38
PGAP2-219ENST00000479072 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
PGAP2-219ENST00000479072 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
PGAP2-219ENST00000479072 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
PGAP2-219ENST00000479072 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
PGAP2-219ENST00000479072 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
PGAP2-219ENST00000479072 SMARCA4P51532 1647 aa23.42■■□□□ 1.34
PGAP2-219ENST00000479072 NESP48681 1621 aa23.35■■□□□ 1.33
PGAP2-219ENST00000479072 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
PGAP2-219ENST00000479072 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
PGAP2-219ENST00000479072 PEG3Q9GZU2 1588 aa23.19■■□□□ 1.3
PGAP2-219ENST00000479072 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
PGAP2-219ENST00000479072 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
PGAP2-219ENST00000479072 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
PGAP2-219ENST00000479072 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
PGAP2-219ENST00000479072 MROH2BQ7Z745 1585 aa23.04■■□□□ 1.28
PGAP2-219ENST00000479072 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
PGAP2-219ENST00000479072 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
PGAP2-219ENST00000479072 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
PGAP2-219ENST00000479072 WDR62O43379 1518 aa22.81■■□□□ 1.24
PGAP2-219ENST00000479072 WIZO95785 1651 aa22.76■■□□□ 1.23
PGAP2-219ENST00000479072 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
PGAP2-219ENST00000479072 FANCD2Q9BXW9 1451 aa22.66■■□□□ 1.22
PGAP2-219ENST00000479072 CFTRP13569 1480 aa22.57■■□□□ 1.2
PGAP2-219ENST00000479072 OSCARQ8IYS5 282 aa22.56■■□□□ 1.2
PGAP2-219ENST00000479072 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
PGAP2-219ENST00000479072 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
PGAP2-219ENST00000479072 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
PGAP2-219ENST00000479072 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
PGAP2-219ENST00000479072 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
PGAP2-219ENST00000479072 RIMBP3CA6NJZ7 1639 aa22.28■■□□□ 1.16
PGAP2-219ENST00000479072 RIMBP3BA6NNM3 1639 aa22.28■■□□□ 1.16
PGAP2-219ENST00000479072 RIMBP3Q9UFD9 1639 aa22.28■■□□□ 1.16
PGAP2-219ENST00000479072 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
PGAP2-219ENST00000479072 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
PGAP2-219ENST00000479072 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
PGAP2-219ENST00000479072 ARHGEF11O15085 1522 aa22.17■■□□□ 1.14
PGAP2-219ENST00000479072 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
PGAP2-219ENST00000479072 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
PGAP2-219ENST00000479072 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.13
PGAP2-219ENST00000479072 CYB5RLQ6IPT4 315 aa22.04■■□□□ 1.12
PGAP2-219ENST00000479072 CHD1O14646 1710 aa22.02■■□□□ 1.12
PGAP2-219ENST00000479072 AQRO60306 1485 aaKnown RBP eCLIP22.01■■□□□ 1.11
PGAP2-219ENST00000479072 TARBP1Q13395 1621 aaKnown RBP22■■□□□ 1.11
PGAP2-219ENST00000479072 FBLN2P98095 1184 aa21.97■■□□□ 1.11
PGAP2-219ENST00000479072 POLA1P09884 1462 aaPredicted RBP21.93■■□□□ 1.1
PGAP2-219ENST00000479072 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
PGAP2-219ENST00000479072 ARAP1Q96P48 1450 aa21.92■■□□□ 1.1
PGAP2-219ENST00000479072 SOGA1O94964 1423 aa21.85■■□□□ 1.09
PGAP2-219ENST00000479072 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
PGAP2-219ENST00000479072 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
PGAP2-219ENST00000479072 WDR97A6NE52 1622 aa21.79■■□□□ 1.08
PGAP2-219ENST00000479072 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
PGAP2-219ENST00000479072 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
PGAP2-219ENST00000479072 CHMP7Q8WUX9 453 aaPredicted RBP21.75■■□□□ 1.07
PGAP2-219ENST00000479072 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
PGAP2-219ENST00000479072 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
PGAP2-219ENST00000479072 MAGI1Q96QZ7 1491 aaPredicted RBP21.73■■□□□ 1.07
PGAP2-219ENST00000479072 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
PGAP2-219ENST00000479072 CUX1P39880 1505 aa21.67■■□□□ 1.06
PGAP2-219ENST00000479072 SYNJ2O15056 1496 aa21.66■■□□□ 1.06
PGAP2-219ENST00000479072 PBRM1Q86U86 1689 aa21.59■■□□□ 1.05
PGAP2-219ENST00000479072 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.04
PGAP2-219ENST00000479072 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
PGAP2-219ENST00000479072 ABCA10Q8WWZ4 1543 aa21.5■■□□□ 1.03
PGAP2-219ENST00000479072 ABCA5Q8WWZ7 1642 aa21.48■■□□□ 1.03
PGAP2-219ENST00000479072 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
PGAP2-219ENST00000479072 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.019e-6■■■■■ 50.1
PGAP2-219ENST00000479072 ERCC6L2Q5T890 1561 aa21.36■■□□□ 1.01
PGAP2-219ENST00000479072 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
PGAP2-219ENST00000479072 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
PGAP2-219ENST00000479072 NUP160Q12769 1436 aa21.33■■□□□ 1.01
PGAP2-219ENST00000479072 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
PGAP2-219ENST00000479072 SHROOM2Q13796 1616 aa21.28■■□□□ 1
PGAP2-219ENST00000479072 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
PGAP2-219ENST00000479072 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
PGAP2-219ENST00000479072 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
PGAP2-219ENST00000479072 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
PGAP2-219ENST00000479072 PRG4Q92954 1404 aaPredicted RBP21.18■□□□□ 0.98
PGAP2-219ENST00000479072 KIF13AQ9H1H9 1805 aa21.16■□□□□ 0.98
PGAP2-219ENST00000479072 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms