RNA–Protein interactions for RNA: ENST00000479046.1

TRDMT1-208, Transcript of tRNA aspartic acid methyltransferase 1, humanhuman

TSL 3

Gene TRDMT1, Length 711 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDMT1-208ENST00000479046 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
TRDMT1-208ENST00000479046 CCDC180Q9P1Z9 1646 aa36.49■■■■□ 3.43
TRDMT1-208ENST00000479046 ABCC9O60706 1549 aa35.89■■■■□ 3.34
TRDMT1-208ENST00000479046 DCAF8L2P0C7V8 631 aa34.5■■■■□ 3.11
TRDMT1-208ENST00000479046 RB1CC1Q8TDY2 1594 aa34.47■■■■□ 3.11
TRDMT1-208ENST00000479046 NACADO15069 1562 aa34.36■■■■□ 3.09
TRDMT1-208ENST00000479046 ZCCHC6Q5VYS8 1495 aaKnown RBP34.12■■■■□ 3.05
TRDMT1-208ENST00000479046 MYO15BQ96JP2 1530 aa34.05■■■■□ 3.04
TRDMT1-208ENST00000479046 DCAF1Q9Y4B6 1507 aa33.87■■■■□ 3.01
TRDMT1-208ENST00000479046 UNC13AQ9UPW8 1703 aa33.53■■■□□ 2.96
TRDMT1-208ENST00000479046 PABPN1Q86U42 306 aaKnown RBP eCLIP33.52■■■□□ 2.96
TRDMT1-208ENST00000479046 SCRIBQ14160 1630 aa33.36■■■□□ 2.93
TRDMT1-208ENST00000479046 BICRAQ9NZM4 1560 aa33.28■■■□□ 2.92
TRDMT1-208ENST00000479046 SHROOM4Q9ULL8 1493 aa33.05■■■□□ 2.88
TRDMT1-208ENST00000479046 DNAJC5BQ9UF47 199 aa32.89■■■□□ 2.86
TRDMT1-208ENST00000479046 EIF4G1Q04637 1599 aaKnown RBP32.51■■■□□ 2.79
TRDMT1-208ENST00000479046 CC2D2AQ9P2K1 1620 aa32.4■■■□□ 2.78
TRDMT1-208ENST00000479046 CECR2Q9BXF3 1484 aa32.26■■■□□ 2.75
TRDMT1-208ENST00000479046 SMARCA4P51532 1647 aa31.84■■■□□ 2.69
TRDMT1-208ENST00000479046 BAZ1AQ9NRL2 1556 aaPredicted RBP31.83■■■□□ 2.69
TRDMT1-208ENST00000479046 SMARCA2P51531 1590 aa31.71■■■□□ 2.67
TRDMT1-208ENST00000479046 ATAD2BQ9ULI0 1458 aa31.69■■■□□ 2.66
TRDMT1-208ENST00000479046 NCAPD3P42695 1498 aa31.66■■■□□ 2.66
TRDMT1-208ENST00000479046 MROH2BQ7Z745 1585 aa31.57■■■□□ 2.64
TRDMT1-208ENST00000479046 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
TRDMT1-208ENST00000479046 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
TRDMT1-208ENST00000479046 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
TRDMT1-208ENST00000479046 WIZO95785 1651 aa31.23■■■□□ 2.59
TRDMT1-208ENST00000479046 RSF1Q96T23 1441 aaPredicted RBP31.17■■■□□ 2.58
TRDMT1-208ENST00000479046 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
TRDMT1-208ENST00000479046 NESP48681 1621 aa30.96■■■□□ 2.55
TRDMT1-208ENST00000479046 TOP2AP11388 1531 aaKnown RBP30.93■■■□□ 2.54
TRDMT1-208ENST00000479046 LAMC3Q9Y6N6 1575 aa30.91■■■□□ 2.54
TRDMT1-208ENST00000479046 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
TRDMT1-208ENST00000479046 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
TRDMT1-208ENST00000479046 CUX2O14529 1486 aa30.66■■■□□ 2.5
TRDMT1-208ENST00000479046 KIF21AQ7Z4S6 1674 aa30.59■■■□□ 2.49
TRDMT1-208ENST00000479046 CFTRP13569 1480 aa30.55■■■□□ 2.48
TRDMT1-208ENST00000479046 CCDC88BA6NC98 1476 aa30.54■■■□□ 2.48
TRDMT1-208ENST00000479046 THOC2Q8NI27 1593 aaKnown RBP30.51■■■□□ 2.47
TRDMT1-208ENST00000479046 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
TRDMT1-208ENST00000479046 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
TRDMT1-208ENST00000479046 SUPT5HO00267 1087 aaKnown RBP30.46■■■□□ 2.47
TRDMT1-208ENST00000479046 MRC2Q9UBG0 1479 aa30.43■■■□□ 2.46
TRDMT1-208ENST00000479046 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
TRDMT1-208ENST00000479046 WDR62O43379 1518 aa30.27■■■□□ 2.44
TRDMT1-208ENST00000479046 URB2Q14146 1524 aaKnown RBP30.11■■■□□ 2.41
TRDMT1-208ENST00000479046 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
TRDMT1-208ENST00000479046 TOPBP1Q92547 1522 aa29.93■■■□□ 2.38
TRDMT1-208ENST00000479046 DNMBPQ6XZF7 1577 aa29.91■■■□□ 2.38
TRDMT1-208ENST00000479046 IFT140Q96RY7 1462 aa29.82■■■□□ 2.36
TRDMT1-208ENST00000479046 DNAJC5Q9H3Z4 198 aa29.8■■■□□ 2.36
TRDMT1-208ENST00000479046 POLA1P09884 1462 aaPredicted RBP29.67■■■□□ 2.34
TRDMT1-208ENST00000479046 CUX1P39880 1505 aa29.64■■■□□ 2.34
TRDMT1-208ENST00000479046 ZNF608Q9ULD9 1512 aaPredicted RBP29.63■■■□□ 2.33
TRDMT1-208ENST00000479046 FGD5Q6ZNL6 1462 aa29.61■■■□□ 2.33
TRDMT1-208ENST00000479046 SOGA1O94964 1423 aa29.59■■■□□ 2.33
TRDMT1-208ENST00000479046 TARBP1Q13395 1621 aaKnown RBP29.55■■■□□ 2.32
TRDMT1-208ENST00000479046 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
TRDMT1-208ENST00000479046 EIF4G3O43432 1585 aaKnown RBP29.54■■■□□ 2.32
TRDMT1-208ENST00000479046 WRNQ14191 1432 aaPredicted RBP eCLIP29.48■■■□□ 2.31
TRDMT1-208ENST00000479046 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.31
TRDMT1-208ENST00000479046 TDRD9Q8NDG6 1382 aaKnown RBP29.42■■■□□ 2.3
TRDMT1-208ENST00000479046 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
TRDMT1-208ENST00000479046 WDR97A6NE52 1622 aa29.38■■■□□ 2.29
TRDMT1-208ENST00000479046 TOP2BQ02880 1626 aa29.36■■■□□ 2.29
TRDMT1-208ENST00000479046 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
TRDMT1-208ENST00000479046 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
TRDMT1-208ENST00000479046 FBLN2P98095 1184 aa29.3■■■□□ 2.28
TRDMT1-208ENST00000479046 ABCA10Q8WWZ4 1543 aa29.29■■■□□ 2.28
TRDMT1-208ENST00000479046 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
TRDMT1-208ENST00000479046 GAPVD1Q14C86 1478 aa29.25■■■□□ 2.27
TRDMT1-208ENST00000479046 SNAPC4Q5SXM2 1469 aa29.24■■■□□ 2.27
TRDMT1-208ENST00000479046 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
TRDMT1-208ENST00000479046 CHD1O14646 1710 aa29.17■■■□□ 2.26
TRDMT1-208ENST00000479046 CHMP7Q8WUX9 453 aaPredicted RBP29.16■■■□□ 2.26
TRDMT1-208ENST00000479046 ABCA5Q8WWZ7 1642 aa29.16■■■□□ 2.26
TRDMT1-208ENST00000479046 PBRM1Q86U86 1689 aa29.15■■■□□ 2.26
TRDMT1-208ENST00000479046 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
TRDMT1-208ENST00000479046 ERICH3Q5RHP9 1530 aa28.95■■■□□ 2.23
TRDMT1-208ENST00000479046 TRIM41Q8WV44 630 aa28.95■■■□□ 2.22
TRDMT1-208ENST00000479046 ADAMTS12P58397 1594 aa28.93■■■□□ 2.22
TRDMT1-208ENST00000479046 FHAD1B1AJZ9 1412 aa28.91■■■□□ 2.22
TRDMT1-208ENST00000479046 KIF27Q86VH2 1401 aa28.91■■■□□ 2.22
TRDMT1-208ENST00000479046 ARHGEF11O15085 1522 aa28.88■■■□□ 2.21
TRDMT1-208ENST00000479046 RIMBP3CA6NJZ7 1639 aa28.87■■■□□ 2.21
TRDMT1-208ENST00000479046 RIMBP3BA6NNM3 1639 aa28.87■■■□□ 2.21
TRDMT1-208ENST00000479046 RIMBP3Q9UFD9 1639 aa28.87■■■□□ 2.21
TRDMT1-208ENST00000479046 GRIN2AQ12879 1464 aa28.86■■■□□ 2.21
TRDMT1-208ENST00000479046 CLASP1Q7Z460 1538 aa28.83■■■□□ 2.21
TRDMT1-208ENST00000479046 NUP160Q12769 1436 aa28.7■■■□□ 2.19
TRDMT1-208ENST00000479046 IGF1RP08069 1367 aa28.69■■■□□ 2.18
TRDMT1-208ENST00000479046 CUL7Q14999 1698 aa28.69■■■□□ 2.18
TRDMT1-208ENST00000479046 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
TRDMT1-208ENST00000479046 CYB5RLQ6IPT4 315 aa28.68■■■□□ 2.18
TRDMT1-208ENST00000479046 ARAP1Q96P48 1450 aa28.62■■■□□ 2.17
TRDMT1-208ENST00000479046 CARMIL1Q5VZK9 1371 aa28.6■■■□□ 2.17
TRDMT1-208ENST00000479046 RUSC2Q8N2Y8 1516 aa28.49■■■□□ 2.15
TRDMT1-208ENST00000479046 JPH4Q96JJ6 628 aa28.46■■■□□ 2.15
TRDMT1-208ENST00000479046 SHROOM2Q13796 1616 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms