RNA–Protein interactions for RNA: ENST00000479042.1

LSP1P2-201, Transcript of LSP1 pseudogene 2, humanhuman

BASIC

Gene LSP1P2, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P2-201ENST00000479042 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
LSP1P2-201ENST00000479042 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
LSP1P2-201ENST00000479042 ABCC9O60706 1549 aa24.77■■□□□ 1.56
LSP1P2-201ENST00000479042 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
LSP1P2-201ENST00000479042 DCAF8L2P0C7V8 631 aa23.65■■□□□ 1.38
LSP1P2-201ENST00000479042 NACADO15069 1562 aa23.57■■□□□ 1.36
LSP1P2-201ENST00000479042 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
LSP1P2-201ENST00000479042 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
LSP1P2-201ENST00000479042 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
LSP1P2-201ENST00000479042 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
LSP1P2-201ENST00000479042 DNAJC5BQ9UF47 199 aa23.16■■□□□ 1.3
LSP1P2-201ENST00000479042 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
LSP1P2-201ENST00000479042 SCRIBQ14160 1630 aa23.04■■□□□ 1.28
LSP1P2-201ENST00000479042 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
LSP1P2-201ENST00000479042 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
LSP1P2-201ENST00000479042 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
LSP1P2-201ENST00000479042 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
LSP1P2-201ENST00000479042 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
LSP1P2-201ENST00000479042 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
LSP1P2-201ENST00000479042 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
LSP1P2-201ENST00000479042 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
LSP1P2-201ENST00000479042 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
LSP1P2-201ENST00000479042 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
LSP1P2-201ENST00000479042 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
LSP1P2-201ENST00000479042 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
LSP1P2-201ENST00000479042 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
LSP1P2-201ENST00000479042 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.05
LSP1P2-201ENST00000479042 WIZO95785 1651 aa21.59■■□□□ 1.05
LSP1P2-201ENST00000479042 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
LSP1P2-201ENST00000479042 NESP48681 1621 aa21.42■■□□□ 1.02
LSP1P2-201ENST00000479042 ERCC6Q03468 1493 aa21.31■■□□□ 1
LSP1P2-201ENST00000479042 TOP2AP11388 1531 aaKnown RBP21.28■■□□□ 1
LSP1P2-201ENST00000479042 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
LSP1P2-201ENST00000479042 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
LSP1P2-201ENST00000479042 CUX2O14529 1486 aa21.13■□□□□ 0.97
LSP1P2-201ENST00000479042 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
LSP1P2-201ENST00000479042 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
LSP1P2-201ENST00000479042 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
LSP1P2-201ENST00000479042 DNAJC5Q9H3Z4 198 aa21.04■□□□□ 0.96
LSP1P2-201ENST00000479042 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
LSP1P2-201ENST00000479042 CFTRP13569 1480 aa20.99■□□□□ 0.95
LSP1P2-201ENST00000479042 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
LSP1P2-201ENST00000479042 CEP164Q9UPV0 1460 aa20.92■□□□□ 0.94
LSP1P2-201ENST00000479042 MRC2Q9UBG0 1479 aa20.91■□□□□ 0.94
LSP1P2-201ENST00000479042 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
LSP1P2-201ENST00000479042 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
LSP1P2-201ENST00000479042 WDR62O43379 1518 aa20.85■□□□□ 0.93
LSP1P2-201ENST00000479042 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
LSP1P2-201ENST00000479042 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
LSP1P2-201ENST00000479042 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
LSP1P2-201ENST00000479042 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
LSP1P2-201ENST00000479042 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
LSP1P2-201ENST00000479042 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
LSP1P2-201ENST00000479042 CUX1P39880 1505 aa20.44■□□□□ 0.86
LSP1P2-201ENST00000479042 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
LSP1P2-201ENST00000479042 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
LSP1P2-201ENST00000479042 TARBP1Q13395 1621 aaKnown RBP20.39■□□□□ 0.86
LSP1P2-201ENST00000479042 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
LSP1P2-201ENST00000479042 FGD5Q6ZNL6 1462 aa20.38■□□□□ 0.85
LSP1P2-201ENST00000479042 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
LSP1P2-201ENST00000479042 SOGA1O94964 1423 aa20.3■□□□□ 0.84
LSP1P2-201ENST00000479042 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
LSP1P2-201ENST00000479042 TDRD9Q8NDG6 1382 aaKnown RBP20.25■□□□□ 0.83
LSP1P2-201ENST00000479042 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
LSP1P2-201ENST00000479042 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
LSP1P2-201ENST00000479042 BIVM-ERCC5R4GMW8 1640 aa20.21■□□□□ 0.83
LSP1P2-201ENST00000479042 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
LSP1P2-201ENST00000479042 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
LSP1P2-201ENST00000479042 CHD1O14646 1710 aa20.19■□□□□ 0.82
LSP1P2-201ENST00000479042 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
LSP1P2-201ENST00000479042 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
LSP1P2-201ENST00000479042 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
LSP1P2-201ENST00000479042 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
LSP1P2-201ENST00000479042 ABCA5Q8WWZ7 1642 aa20.11■□□□□ 0.81
LSP1P2-201ENST00000479042 FBLN2P98095 1184 aa20.08■□□□□ 0.81
LSP1P2-201ENST00000479042 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
LSP1P2-201ENST00000479042 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
LSP1P2-201ENST00000479042 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
LSP1P2-201ENST00000479042 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
LSP1P2-201ENST00000479042 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
LSP1P2-201ENST00000479042 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
LSP1P2-201ENST00000479042 SYNJ2O15056 1496 aa19.96■□□□□ 0.79
LSP1P2-201ENST00000479042 ARHGEF11O15085 1522 aa19.94■□□□□ 0.78
LSP1P2-201ENST00000479042 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
LSP1P2-201ENST00000479042 ADAMTS12P58397 1594 aa19.94■□□□□ 0.78
LSP1P2-201ENST00000479042 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.77
LSP1P2-201ENST00000479042 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
LSP1P2-201ENST00000479042 GRIN2AQ12879 1464 aa19.85■□□□□ 0.77
LSP1P2-201ENST00000479042 CEP170Q5SW79 1584 aa19.82■□□□□ 0.76
LSP1P2-201ENST00000479042 FHAD1B1AJZ9 1412 aa19.81■□□□□ 0.76
LSP1P2-201ENST00000479042 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
LSP1P2-201ENST00000479042 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
LSP1P2-201ENST00000479042 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
LSP1P2-201ENST00000479042 NUP160Q12769 1436 aa19.73■□□□□ 0.75
LSP1P2-201ENST00000479042 ERCC6L2Q5T890 1561 aa19.7■□□□□ 0.74
LSP1P2-201ENST00000479042 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
LSP1P2-201ENST00000479042 IGF1RP08069 1367 aa19.7■□□□□ 0.74
LSP1P2-201ENST00000479042 CUL7Q14999 1698 aa19.69■□□□□ 0.74
LSP1P2-201ENST00000479042 SHROOM2Q13796 1616 aa19.63■□□□□ 0.73
LSP1P2-201ENST00000479042 CARMIL1Q5VZK9 1371 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms