RNA–Protein interactions for RNA: ENST00000478970.6

LDHA-209, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-209ENST00000478970 NISCHQ9Y2I1 1504 aa38.33■■■■□ 3.73
LDHA-209ENST00000478970 CCDC180Q9P1Z9 1646 aa34.19■■■■□ 3.06
LDHA-209ENST00000478970 ABCC9O60706 1549 aa33.25■■■□□ 2.91
LDHA-209ENST00000478970 RB1CC1Q8TDY2 1594 aa32.14■■■□□ 2.74
LDHA-209ENST00000478970 NACADO15069 1562 aa32.12■■■□□ 2.73
LDHA-209ENST00000478970 MYO15BQ96JP2 1530 aa31.99■■■□□ 2.71
LDHA-209ENST00000478970 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
LDHA-209ENST00000478970 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
LDHA-209ENST00000478970 DCAF1Q9Y4B6 1507 aa31.83■■■□□ 2.69
LDHA-209ENST00000478970 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
LDHA-209ENST00000478970 BICRAQ9NZM4 1560 aa31.08■■■□□ 2.57
LDHA-209ENST00000478970 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
LDHA-209ENST00000478970 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
LDHA-209ENST00000478970 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.54
LDHA-209ENST00000478970 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
LDHA-209ENST00000478970 EIF4G1Q04637 1599 aaKnown RBP30.28■■■□□ 2.44
LDHA-209ENST00000478970 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.42
LDHA-209ENST00000478970 CECR2Q9BXF3 1484 aa29.93■■■□□ 2.38
LDHA-209ENST00000478970 BAZ1AQ9NRL2 1556 aaPredicted RBP29.76■■■□□ 2.35
LDHA-209ENST00000478970 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
LDHA-209ENST00000478970 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
LDHA-209ENST00000478970 SMARCA2P51531 1590 aa29.6■■■□□ 2.33
LDHA-209ENST00000478970 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
LDHA-209ENST00000478970 PEG3Q9GZU2 1588 aa29.53■■■□□ 2.32
LDHA-209ENST00000478970 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
LDHA-209ENST00000478970 MROH2BQ7Z745 1585 aa29.47■■■□□ 2.31
LDHA-209ENST00000478970 BAZ1BQ9UIG0 1483 aaKnown RBP29.34■■■□□ 2.29
LDHA-209ENST00000478970 WIZO95785 1651 aa29.16■■■□□ 2.26
LDHA-209ENST00000478970 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
LDHA-209ENST00000478970 TOP2AP11388 1531 aaKnown RBP28.92■■■□□ 2.22
LDHA-209ENST00000478970 LAMC3Q9Y6N6 1575 aa28.86■■■□□ 2.21
LDHA-209ENST00000478970 NESP48681 1621 aa28.75■■■□□ 2.19
LDHA-209ENST00000478970 ERCC6Q03468 1493 aa28.72■■■□□ 2.19
LDHA-209ENST00000478970 CADPSQ9ULU8 1353 aa28.71■■■□□ 2.19
LDHA-209ENST00000478970 PDS5BQ9NTI5 1447 aa28.64■■■□□ 2.18
LDHA-209ENST00000478970 CFTRP13569 1480 aa28.55■■■□□ 2.16
LDHA-209ENST00000478970 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
LDHA-209ENST00000478970 CUX2O14529 1486 aa28.51■■■□□ 2.15
LDHA-209ENST00000478970 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
LDHA-209ENST00000478970 PRDM2Q13029 1718 aa28.43■■■□□ 2.14
LDHA-209ENST00000478970 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
LDHA-209ENST00000478970 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
LDHA-209ENST00000478970 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
LDHA-209ENST00000478970 MRC2Q9UBG0 1479 aa28.31■■■□□ 2.12
LDHA-209ENST00000478970 SUPT5HO00267 1087 aaKnown RBP28.3■■■□□ 2.12
LDHA-209ENST00000478970 WDR62O43379 1518 aa28.23■■■□□ 2.11
LDHA-209ENST00000478970 URB2Q14146 1524 aaKnown RBP28.04■■■□□ 2.08
LDHA-209ENST00000478970 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
LDHA-209ENST00000478970 DNMBPQ6XZF7 1577 aa27.91■■■□□ 2.06
LDHA-209ENST00000478970 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
LDHA-209ENST00000478970 IFT140Q96RY7 1462 aa27.77■■■□□ 2.04
LDHA-209ENST00000478970 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
LDHA-209ENST00000478970 CUX1P39880 1505 aa27.66■■■□□ 2.02
LDHA-209ENST00000478970 TARBP1Q13395 1621 aaKnown RBP27.62■■■□□ 2.01
LDHA-209ENST00000478970 FGD5Q6ZNL6 1462 aa27.58■■■□□ 2.01
LDHA-209ENST00000478970 DNAJC5Q9H3Z4 198 aa27.55■■■□□ 2
LDHA-209ENST00000478970 SOGA1O94964 1423 aa27.55■■■□□ 2
LDHA-209ENST00000478970 WDR97A6NE52 1622 aa27.55■■■□□ 2
LDHA-209ENST00000478970 ZNF608Q9ULD9 1512 aaPredicted RBP27.53■■■□□ 2
LDHA-209ENST00000478970 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
LDHA-209ENST00000478970 TOP2BQ02880 1626 aa27.5■■□□□ 1.99
LDHA-209ENST00000478970 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
LDHA-209ENST00000478970 EIF4G3O43432 1585 aaKnown RBP27.5■■□□□ 1.99
LDHA-209ENST00000478970 RAD54L2Q9Y4B4 1467 aa27.47■■□□□ 1.99
LDHA-209ENST00000478970 SYNJ1O43426 1573 aa27.41■■□□□ 1.98
LDHA-209ENST00000478970 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.974e-11■■■■□ 21.6
LDHA-209ENST00000478970 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
LDHA-209ENST00000478970 TDRD9Q8NDG6 1382 aaKnown RBP27.33■■□□□ 1.97
LDHA-209ENST00000478970 OSCARQ8IYS5 282 aa27.27■■□□□ 1.96
LDHA-209ENST00000478970 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
LDHA-209ENST00000478970 ABCA5Q8WWZ7 1642 aa27.25■■□□□ 1.95
LDHA-209ENST00000478970 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
LDHA-209ENST00000478970 MAGI1Q96QZ7 1491 aaPredicted RBP27.23■■□□□ 1.95
LDHA-209ENST00000478970 PBRM1Q86U86 1689 aa27.22■■□□□ 1.95
LDHA-209ENST00000478970 SNAPC4Q5SXM2 1469 aa27.17■■□□□ 1.94
LDHA-209ENST00000478970 CHD1O14646 1710 aa27.16■■□□□ 1.94
LDHA-209ENST00000478970 SYNJ2O15056 1496 aa27.09■■□□□ 1.93
LDHA-209ENST00000478970 ERICH3Q5RHP9 1530 aa27.08■■□□□ 1.93
LDHA-209ENST00000478970 CHMP7Q8WUX9 453 aaPredicted RBP27.04■■□□□ 1.92
LDHA-209ENST00000478970 FBLN2P98095 1184 aa27.03■■□□□ 1.92
LDHA-209ENST00000478970 ADAMTS12P58397 1594 aa26.98■■□□□ 1.91
LDHA-209ENST00000478970 KIF27Q86VH2 1401 aa26.98■■□□□ 1.91
LDHA-209ENST00000478970 FHAD1B1AJZ9 1412 aa26.96■■□□□ 1.91
LDHA-209ENST00000478970 GRIN2AQ12879 1464 aa26.9■■□□□ 1.9
LDHA-209ENST00000478970 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
LDHA-209ENST00000478970 CUL7Q14999 1698 aa26.85■■□□□ 1.89
LDHA-209ENST00000478970 TRIM41Q8WV44 630 aa26.83■■□□□ 1.89
LDHA-209ENST00000478970 IGF1RP08069 1367 aa26.82■■□□□ 1.88
LDHA-209ENST00000478970 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
LDHA-209ENST00000478970 RIMBP3CA6NJZ7 1639 aa26.8■■□□□ 1.88
LDHA-209ENST00000478970 RIMBP3BA6NNM3 1639 aa26.8■■□□□ 1.88
LDHA-209ENST00000478970 RIMBP3Q9UFD9 1639 aa26.8■■□□□ 1.88
LDHA-209ENST00000478970 NUP160Q12769 1436 aa26.8■■□□□ 1.88
LDHA-209ENST00000478970 CEP170Q5SW79 1584 aa26.73■■□□□ 1.87
LDHA-209ENST00000478970 CARMIL1Q5VZK9 1371 aa26.68■■□□□ 1.86
LDHA-209ENST00000478970 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
LDHA-209ENST00000478970 RUSC2Q8N2Y8 1516 aa26.58■■□□□ 1.85
LDHA-209ENST00000478970 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
LDHA-209ENST00000478970 KIAA0586Q9BVV6 1533 aa26.55■■□□□ 1.84
LDHA-209ENST00000478970 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms