RNA–Protein interactions for RNA: ENST00000478931.1

GABBR1-212, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-212ENST00000478931 NISCHQ9Y2I1 1504 aa26.61■■□□□ 1.85
GABBR1-212ENST00000478931 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
GABBR1-212ENST00000478931 ABCC9O60706 1549 aa23.51■■□□□ 1.35
GABBR1-212ENST00000478931 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
GABBR1-212ENST00000478931 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
GABBR1-212ENST00000478931 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
GABBR1-212ENST00000478931 NACADO15069 1562 aa22.33■■□□□ 1.16
GABBR1-212ENST00000478931 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
GABBR1-212ENST00000478931 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
GABBR1-212ENST00000478931 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
GABBR1-212ENST00000478931 PABPN1Q86U42 306 aaKnown RBP eCLIP21.83■■□□□ 1.09
GABBR1-212ENST00000478931 UNC13AQ9UPW8 1703 aa21.78■■□□□ 1.08
GABBR1-212ENST00000478931 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
GABBR1-212ENST00000478931 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
GABBR1-212ENST00000478931 SHROOM4Q9ULL8 1493 aa21.48■■□□□ 1.03
GABBR1-212ENST00000478931 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
GABBR1-212ENST00000478931 DNAJC5Q9H3Z4 198 aa21.25■□□□□ 0.99
GABBR1-212ENST00000478931 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
GABBR1-212ENST00000478931 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
GABBR1-212ENST00000478931 SMARCA4P51532 1647 aa20.69■□□□□ 0.9
GABBR1-212ENST00000478931 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
GABBR1-212ENST00000478931 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
GABBR1-212ENST00000478931 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
GABBR1-212ENST00000478931 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
GABBR1-212ENST00000478931 CUX2O14529 1486 aa20.53■□□□□ 0.88
GABBR1-212ENST00000478931 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
GABBR1-212ENST00000478931 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
GABBR1-212ENST00000478931 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
GABBR1-212ENST00000478931 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
GABBR1-212ENST00000478931 ERCC6Q03468 1493 aa20.36■□□□□ 0.85
GABBR1-212ENST00000478931 WIZO95785 1651 aa20.29■□□□□ 0.84
GABBR1-212ENST00000478931 RSF1Q96T23 1441 aaPredicted RBP20.23■□□□□ 0.83
GABBR1-212ENST00000478931 NESP48681 1621 aa20.12■□□□□ 0.81
GABBR1-212ENST00000478931 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
GABBR1-212ENST00000478931 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
GABBR1-212ENST00000478931 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
GABBR1-212ENST00000478931 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
GABBR1-212ENST00000478931 PDS5BQ9NTI5 1447 aa19.98■□□□□ 0.79
GABBR1-212ENST00000478931 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
GABBR1-212ENST00000478931 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
GABBR1-212ENST00000478931 CFTRP13569 1480 aa19.85■□□□□ 0.77
GABBR1-212ENST00000478931 CCDC88BA6NC98 1476 aa19.83■□□□□ 0.76
GABBR1-212ENST00000478931 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
GABBR1-212ENST00000478931 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
GABBR1-212ENST00000478931 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
GABBR1-212ENST00000478931 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
GABBR1-212ENST00000478931 WDR62O43379 1518 aa19.69■□□□□ 0.74
GABBR1-212ENST00000478931 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
GABBR1-212ENST00000478931 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
GABBR1-212ENST00000478931 OSCARQ8IYS5 282 aa19.52■□□□□ 0.72
GABBR1-212ENST00000478931 ABCC8Q09428 1581 aa19.45■□□□□ 0.7
GABBR1-212ENST00000478931 TOPBP1Q92547 1522 aa19.45■□□□□ 0.7
GABBR1-212ENST00000478931 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
GABBR1-212ENST00000478931 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
GABBR1-212ENST00000478931 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
GABBR1-212ENST00000478931 RIMBP3CA6NJZ7 1639 aa19.27■□□□□ 0.68
GABBR1-212ENST00000478931 RIMBP3BA6NNM3 1639 aa19.27■□□□□ 0.68
GABBR1-212ENST00000478931 RIMBP3Q9UFD9 1639 aa19.27■□□□□ 0.68
GABBR1-212ENST00000478931 CUX1P39880 1505 aa19.25■□□□□ 0.67
GABBR1-212ENST00000478931 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
GABBR1-212ENST00000478931 FGD5Q6ZNL6 1462 aa19.24■□□□□ 0.67
GABBR1-212ENST00000478931 EIF4G3O43432 1585 aaKnown RBP19.22■□□□□ 0.67
GABBR1-212ENST00000478931 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
GABBR1-212ENST00000478931 SOGA1O94964 1423 aa19.2■□□□□ 0.66
GABBR1-212ENST00000478931 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
GABBR1-212ENST00000478931 ARHGEF11O15085 1522 aa19.17■□□□□ 0.66
GABBR1-212ENST00000478931 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
GABBR1-212ENST00000478931 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.65
GABBR1-212ENST00000478931 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
GABBR1-212ENST00000478931 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
GABBR1-212ENST00000478931 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
GABBR1-212ENST00000478931 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
GABBR1-212ENST00000478931 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
GABBR1-212ENST00000478931 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
GABBR1-212ENST00000478931 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
GABBR1-212ENST00000478931 ABCA10Q8WWZ4 1543 aa19.02■□□□□ 0.64
GABBR1-212ENST00000478931 FBLN2P98095 1184 aa19.01■□□□□ 0.63
GABBR1-212ENST00000478931 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
GABBR1-212ENST00000478931 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
GABBR1-212ENST00000478931 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
GABBR1-212ENST00000478931 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
GABBR1-212ENST00000478931 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
GABBR1-212ENST00000478931 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
GABBR1-212ENST00000478931 ABCA5Q8WWZ7 1642 aa18.96■□□□□ 0.63
GABBR1-212ENST00000478931 CHD1O14646 1710 aa18.95■□□□□ 0.62
GABBR1-212ENST00000478931 ARAP1Q96P48 1450 aa18.95■□□□□ 0.62
GABBR1-212ENST00000478931 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
GABBR1-212ENST00000478931 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
GABBR1-212ENST00000478931 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
GABBR1-212ENST00000478931 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
GABBR1-212ENST00000478931 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
GABBR1-212ENST00000478931 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
GABBR1-212ENST00000478931 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
GABBR1-212ENST00000478931 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
GABBR1-212ENST00000478931 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
GABBR1-212ENST00000478931 CEP170Q5SW79 1584 aa18.65■□□□□ 0.58
GABBR1-212ENST00000478931 NUP160Q12769 1436 aa18.65■□□□□ 0.58
GABBR1-212ENST00000478931 CUL7Q14999 1698 aa18.64■□□□□ 0.57
GABBR1-212ENST00000478931 IGF1RP08069 1367 aa18.61■□□□□ 0.57
GABBR1-212ENST00000478931 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms