RNA–Protein interactions for RNA: ENST00000478768.2

SNAP47-208, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 3

Gene SNAP47, Length 870 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-208ENST00000478768 NISCHQ9Y2I1 1504 aa25.73■■□□□ 1.71
SNAP47-208ENST00000478768 ABCC9O60706 1549 aa23.59■■□□□ 1.37
SNAP47-208ENST00000478768 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
SNAP47-208ENST00000478768 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
SNAP47-208ENST00000478768 RB1CC1Q8TDY2 1594 aa22.31■■□□□ 1.16
SNAP47-208ENST00000478768 NACADO15069 1562 aa22.07■■□□□ 1.12
SNAP47-208ENST00000478768 PABPN1Q86U42 306 aaKnown RBP eCLIP21.89■■□□□ 1.09
SNAP47-208ENST00000478768 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
SNAP47-208ENST00000478768 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
SNAP47-208ENST00000478768 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
SNAP47-208ENST00000478768 MYO15BQ96JP2 1530 aa21.63■■□□□ 1.05
SNAP47-208ENST00000478768 SHROOM4Q9ULL8 1493 aa21.33■■□□□ 1.01
SNAP47-208ENST00000478768 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
SNAP47-208ENST00000478768 CECR2Q9BXF3 1484 aa21.28■■□□□ 1
SNAP47-208ENST00000478768 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
SNAP47-208ENST00000478768 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
SNAP47-208ENST00000478768 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
SNAP47-208ENST00000478768 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
SNAP47-208ENST00000478768 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
SNAP47-208ENST00000478768 CUX2O14529 1486 aa20.48■□□□□ 0.87
SNAP47-208ENST00000478768 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
SNAP47-208ENST00000478768 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
SNAP47-208ENST00000478768 ATAD2BQ9ULI0 1458 aa20.25■□□□□ 0.83
SNAP47-208ENST00000478768 HMGXB3Q12766 1538 aa20.2■□□□□ 0.82
SNAP47-208ENST00000478768 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
SNAP47-208ENST00000478768 NESP48681 1621 aa20.18■□□□□ 0.82
SNAP47-208ENST00000478768 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
SNAP47-208ENST00000478768 THOC2Q8NI27 1593 aaKnown RBP20.07■□□□□ 0.8
SNAP47-208ENST00000478768 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
SNAP47-208ENST00000478768 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
SNAP47-208ENST00000478768 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
SNAP47-208ENST00000478768 PEG3Q9GZU2 1588 aa19.97■□□□□ 0.79
SNAP47-208ENST00000478768 KIF21AQ7Z4S6 1674 aa19.95■□□□□ 0.78
SNAP47-208ENST00000478768 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
SNAP47-208ENST00000478768 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
SNAP47-208ENST00000478768 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
SNAP47-208ENST00000478768 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
SNAP47-208ENST00000478768 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
SNAP47-208ENST00000478768 WDR62O43379 1518 aa19.7■□□□□ 0.74
SNAP47-208ENST00000478768 WIZO95785 1651 aa19.6■□□□□ 0.73
SNAP47-208ENST00000478768 CEP164Q9UPV0 1460 aa19.58■□□□□ 0.72
SNAP47-208ENST00000478768 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
SNAP47-208ENST00000478768 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
SNAP47-208ENST00000478768 CFTRP13569 1480 aa19.43■□□□□ 0.7
SNAP47-208ENST00000478768 URB2Q14146 1524 aaKnown RBP19.38■□□□□ 0.69
SNAP47-208ENST00000478768 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
SNAP47-208ENST00000478768 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
SNAP47-208ENST00000478768 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
SNAP47-208ENST00000478768 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
SNAP47-208ENST00000478768 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
SNAP47-208ENST00000478768 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.68
SNAP47-208ENST00000478768 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
SNAP47-208ENST00000478768 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
SNAP47-208ENST00000478768 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
SNAP47-208ENST00000478768 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
SNAP47-208ENST00000478768 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
SNAP47-208ENST00000478768 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.64
SNAP47-208ENST00000478768 CHD1O14646 1710 aa19.05■□□□□ 0.64
SNAP47-208ENST00000478768 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
SNAP47-208ENST00000478768 ABCC8Q09428 1581 aa19.02■□□□□ 0.64
SNAP47-208ENST00000478768 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.63
SNAP47-208ENST00000478768 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
SNAP47-208ENST00000478768 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.637e-7■■■■■ 29.1
SNAP47-208ENST00000478768 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
SNAP47-208ENST00000478768 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
SNAP47-208ENST00000478768 FBLN2P98095 1184 aa18.9■□□□□ 0.62
SNAP47-208ENST00000478768 POLA1P09884 1462 aaPredicted RBP18.89■□□□□ 0.61
SNAP47-208ENST00000478768 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.6
SNAP47-208ENST00000478768 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
SNAP47-208ENST00000478768 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
SNAP47-208ENST00000478768 SOGA1O94964 1423 aa18.78■□□□□ 0.6
SNAP47-208ENST00000478768 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.6
SNAP47-208ENST00000478768 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
SNAP47-208ENST00000478768 SYNJ1O43426 1573 aa18.74■□□□□ 0.59
SNAP47-208ENST00000478768 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
SNAP47-208ENST00000478768 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
SNAP47-208ENST00000478768 CHMP7Q8WUX9 453 aaPredicted RBP18.7■□□□□ 0.58
SNAP47-208ENST00000478768 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
SNAP47-208ENST00000478768 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
SNAP47-208ENST00000478768 CUX1P39880 1505 aa18.65■□□□□ 0.58
SNAP47-208ENST00000478768 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
SNAP47-208ENST00000478768 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
SNAP47-208ENST00000478768 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
SNAP47-208ENST00000478768 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.55
SNAP47-208ENST00000478768 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
SNAP47-208ENST00000478768 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
SNAP47-208ENST00000478768 GRIN2AQ12879 1464 aa18.44■□□□□ 0.54
SNAP47-208ENST00000478768 CEP170Q5SW79 1584 aa18.41■□□□□ 0.54
SNAP47-208ENST00000478768 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
SNAP47-208ENST00000478768 NUP160Q12769 1436 aa18.38■□□□□ 0.53
SNAP47-208ENST00000478768 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
SNAP47-208ENST00000478768 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
SNAP47-208ENST00000478768 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
SNAP47-208ENST00000478768 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
SNAP47-208ENST00000478768 BIVM-ERCC5R4GMW8 1640 aa18.29■□□□□ 0.52
SNAP47-208ENST00000478768 TOP2BQ02880 1626 aa18.27■□□□□ 0.51
SNAP47-208ENST00000478768 ERICH3Q5RHP9 1530 aa18.25■□□□□ 0.51
SNAP47-208ENST00000478768 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
SNAP47-208ENST00000478768 ABCC10Q5T3U5 1492 aa18.16■□□□□ 0.5
SNAP47-208ENST00000478768 JPH4Q96JJ6 628 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms