RNA–Protein interactions for RNA: ENST00000478726.1

LRRC4-203, Transcript of leucine rich repeat containing 4, humanhuman

TSL 3

Gene LRRC4, Length 451 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4-203ENST00000478726 NISCHQ9Y2I1 1504 aa56.45■■■■■ 6.63
LRRC4-203ENST00000478726 CCDC180Q9P1Z9 1646 aa50.4■■■■■ 5.66
LRRC4-203ENST00000478726 ABCC9O60706 1549 aa49.71■■■■■ 5.55
LRRC4-203ENST00000478726 RB1CC1Q8TDY2 1594 aa47.61■■■■■ 5.21
LRRC4-203ENST00000478726 NACADO15069 1562 aa47.45■■■■■ 5.19
LRRC4-203ENST00000478726 DCAF8L2P0C7V8 631 aa47.26■■■■■ 5.16
LRRC4-203ENST00000478726 MYO15BQ96JP2 1530 aa47.01■■■■■ 5.12
LRRC4-203ENST00000478726 ZCCHC6Q5VYS8 1495 aaKnown RBP46.95■■■■■ 5.11
LRRC4-203ENST00000478726 UNC13AQ9UPW8 1703 aa46.68■■■■■ 5.06
LRRC4-203ENST00000478726 DCAF1Q9Y4B6 1507 aa46.67■■■■■ 5.06
LRRC4-203ENST00000478726 PABPN1Q86U42 306 aaKnown RBP eCLIP46.36■■■■■ 5.01
LRRC4-203ENST00000478726 BICRAQ9NZM4 1560 aa46.27■■■■■ 5
LRRC4-203ENST00000478726 DNAJC5BQ9UF47 199 aa46.06■■■■■ 4.96
LRRC4-203ENST00000478726 SCRIBQ14160 1630 aa45.95■■■■■ 4.95
LRRC4-203ENST00000478726 SHROOM4Q9ULL8 1493 aa45.62■■■■■ 4.89
LRRC4-203ENST00000478726 EIF4G1Q04637 1599 aaKnown RBP45.03■■■■■ 4.8
LRRC4-203ENST00000478726 CC2D2AQ9P2K1 1620 aa44.97■■■■■ 4.79
LRRC4-203ENST00000478726 CECR2Q9BXF3 1484 aa44.7■■■■■ 4.75
LRRC4-203ENST00000478726 SMARCA4P51532 1647 aa43.92■■■■■ 4.62
LRRC4-203ENST00000478726 NCAPD3P42695 1498 aa43.78■■■■■ 4.6
LRRC4-203ENST00000478726 ATAD2BQ9ULI0 1458 aa43.76■■■■■ 4.6
LRRC4-203ENST00000478726 BAZ1AQ9NRL2 1556 aaPredicted RBP43.75■■■■■ 4.59
LRRC4-203ENST00000478726 SMARCA2P51531 1590 aa43.67■■■■■ 4.58
LRRC4-203ENST00000478726 HMGXB3Q12766 1538 aa43.55■■■■■ 4.56
LRRC4-203ENST00000478726 MROH2BQ7Z745 1585 aa43.53■■■■■ 4.56
LRRC4-203ENST00000478726 PEG3Q9GZU2 1588 aa43.49■■■■■ 4.55
LRRC4-203ENST00000478726 BAZ1BQ9UIG0 1483 aaKnown RBP43.35■■■■■ 4.53
LRRC4-203ENST00000478726 WIZO95785 1651 aa43.07■■■■■ 4.49
LRRC4-203ENST00000478726 NESP48681 1621 aa42.93■■■■■ 4.46
LRRC4-203ENST00000478726 RSF1Q96T23 1441 aaPredicted RBP42.84■■■■■ 4.45
LRRC4-203ENST00000478726 ERCC6Q03468 1493 aa42.83■■■■■ 4.45
LRRC4-203ENST00000478726 LAMC3Q9Y6N6 1575 aa42.71■■■■■ 4.43
LRRC4-203ENST00000478726 CUX2O14529 1486 aa42.55■■■■■ 4.4
LRRC4-203ENST00000478726 TOP2AP11388 1531 aaKnown RBP42.52■■■■■ 4.4
LRRC4-203ENST00000478726 CADPSQ9ULU8 1353 aa42.47■■■■■ 4.39
LRRC4-203ENST00000478726 KIF21AQ7Z4S6 1674 aa42.44■■■■■ 4.39
LRRC4-203ENST00000478726 THOC2Q8NI27 1593 aaKnown RBP42.39■■■■■ 4.38
LRRC4-203ENST00000478726 PDS5BQ9NTI5 1447 aa42.38■■■■■ 4.38
LRRC4-203ENST00000478726 CFTRP13569 1480 aa42.16■■■■■ 4.34
LRRC4-203ENST00000478726 CCDC88BA6NC98 1476 aa42.04■■■■■ 4.32
LRRC4-203ENST00000478726 MRC2Q9UBG0 1479 aa42.02■■■■■ 4.32
LRRC4-203ENST00000478726 FANCD2Q9BXW9 1451 aa42■■■■■ 4.31
LRRC4-203ENST00000478726 CEP164Q9UPV0 1460 aa41.98■■■■■ 4.31
LRRC4-203ENST00000478726 WDR62O43379 1518 aa41.93■■■■■ 4.3
LRRC4-203ENST00000478726 PRDM2Q13029 1718 aa41.89■■■■■ 4.3
LRRC4-203ENST00000478726 DNAJC5Q9H3Z4 198 aa41.75■■■■■ 4.27
LRRC4-203ENST00000478726 URB2Q14146 1524 aaKnown RBP41.65■■■■■ 4.26
LRRC4-203ENST00000478726 SUPT5HO00267 1087 aaKnown RBP41.39■■■■■ 4.22
LRRC4-203ENST00000478726 TOPBP1Q92547 1522 aa41.3■■■■■ 4.2
LRRC4-203ENST00000478726 DNMBPQ6XZF7 1577 aa41.22■■■■■ 4.19
LRRC4-203ENST00000478726 ABCC8Q09428 1581 aa41.2■■■■■ 4.19
LRRC4-203ENST00000478726 IFT140Q96RY7 1462 aa41.1■■■■■ 4.17
LRRC4-203ENST00000478726 ZNF608Q9ULD9 1512 aaPredicted RBP41.03■■■■■ 4.16
LRRC4-203ENST00000478726 POLA1P09884 1462 aaPredicted RBP40.93■■■■■ 4.14
LRRC4-203ENST00000478726 TARBP1Q13395 1621 aaKnown RBP40.93■■■■■ 4.14
LRRC4-203ENST00000478726 CUX1P39880 1505 aa40.86■■■■■ 4.13
LRRC4-203ENST00000478726 EIF4G3O43432 1585 aaKnown RBP40.85■■■■■ 4.13
LRRC4-203ENST00000478726 RAD54L2Q9Y4B4 1467 aa40.77■■■■■ 4.12
LRRC4-203ENST00000478726 FGD5Q6ZNL6 1462 aa40.76■■■■■ 4.12
LRRC4-203ENST00000478726 AQRO60306 1485 aaKnown RBP eCLIP40.71■■■■■ 4.11
LRRC4-203ENST00000478726 SOGA1O94964 1423 aa40.71■■■■■ 4.11
LRRC4-203ENST00000478726 OSCARQ8IYS5 282 aa40.67■■■■■ 4.1
LRRC4-203ENST00000478726 TDRD9Q8NDG6 1382 aaKnown RBP40.56■■■■■ 4.08
LRRC4-203ENST00000478726 WDR97A6NE52 1622 aa40.52■■■■■ 4.08
LRRC4-203ENST00000478726 CHD1O14646 1710 aa40.45■■■■■ 4.07
LRRC4-203ENST00000478726 BIVM-ERCC5R4GMW8 1640 aa40.41■■■■■ 4.06
LRRC4-203ENST00000478726 TOP2BQ02880 1626 aa40.38■■■■■ 4.06
LRRC4-203ENST00000478726 WRNQ14191 1432 aaPredicted RBP eCLIP40.38■■■■■ 4.05
LRRC4-203ENST00000478726 SYNJ1O43426 1573 aa40.38■■■■■ 4.05
LRRC4-203ENST00000478726 ABCA10Q8WWZ4 1543 aa40.33■■■■■ 4.05
LRRC4-203ENST00000478726 SNAPC4Q5SXM2 1469 aa40.32■■■■■ 4.05
LRRC4-203ENST00000478726 GRIN2BQ13224 1484 aa40.29■■■■■ 4.04
LRRC4-203ENST00000478726 PBRM1Q86U86 1689 aa40.27■■■■■ 4.04
LRRC4-203ENST00000478726 ABCA5Q8WWZ7 1642 aa40.26■■■■■ 4.04
LRRC4-203ENST00000478726 FBLN2P98095 1184 aa40.25■■■■■ 4.03
LRRC4-203ENST00000478726 GAPVD1Q14C86 1478 aa40.25■■■■■ 4.03
LRRC4-203ENST00000478726 MAGI1Q96QZ7 1491 aaPredicted RBP40.23■■■■■ 4.03
LRRC4-203ENST00000478726 TRIM41Q8WV44 630 aa40.18■■■■■ 4.02
LRRC4-203ENST00000478726 RIMBP3CA6NJZ7 1639 aa40.17■■■■■ 4.02
LRRC4-203ENST00000478726 RIMBP3BA6NNM3 1639 aa40.17■■■■■ 4.02
LRRC4-203ENST00000478726 RIMBP3Q9UFD9 1639 aa40.17■■■■■ 4.02
LRRC4-203ENST00000478726 SYNJ2O15056 1496 aa40.09■■■■■ 4.01
LRRC4-203ENST00000478726 ARHGEF11O15085 1522 aa40.09■■■■■ 4.01
LRRC4-203ENST00000478726 CHMP7Q8WUX9 453 aaPredicted RBP40.06■■■■■ 4
LRRC4-203ENST00000478726 CLASP1Q7Z460 1538 aa39.97■■■■□ 3.99
LRRC4-203ENST00000478726 ADAMTS12P58397 1594 aa39.89■■■■□ 3.98
LRRC4-203ENST00000478726 ERICH3Q5RHP9 1530 aa39.84■■■■□ 3.97
LRRC4-203ENST00000478726 GRIN2AQ12879 1464 aa39.79■■■■□ 3.96
LRRC4-203ENST00000478726 ARAP1Q96P48 1450 aa39.75■■■■□ 3.95
LRRC4-203ENST00000478726 FHAD1B1AJZ9 1412 aa39.74■■■■□ 3.95
LRRC4-203ENST00000478726 CYB5RLQ6IPT4 315 aa39.69■■■■□ 3.94
LRRC4-203ENST00000478726 CEP170Q5SW79 1584 aa39.66■■■■□ 3.94
LRRC4-203ENST00000478726 NUP160Q12769 1436 aa39.64■■■■□ 3.94
LRRC4-203ENST00000478726 KIF27Q86VH2 1401 aa39.54■■■■□ 3.92
LRRC4-203ENST00000478726 IGF1RP08069 1367 aa39.47■■■■□ 3.91
LRRC4-203ENST00000478726 SHROOM2Q13796 1616 aa39.43■■■■□ 3.9
LRRC4-203ENST00000478726 ERCC6L2Q5T890 1561 aa39.42■■■■□ 3.9
LRRC4-203ENST00000478726 CUL7Q14999 1698 aa39.41■■■■□ 3.9
LRRC4-203ENST00000478726 RUSC2Q8N2Y8 1516 aa39.32■■■■□ 3.89
LRRC4-203ENST00000478726 CARMIL1Q5VZK9 1371 aa39.21■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms