RNA–Protein interactions for RNA: ENST00000478708.2

PDPK1-211, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-211ENST00000478708 NISCHQ9Y2I1 1504 aa46.98■■■■■ 5.11
PDPK1-211ENST00000478708 CCDC180Q9P1Z9 1646 aa41.99■■■■■ 4.31
PDPK1-211ENST00000478708 ABCC9O60706 1549 aa41.64■■■■■ 4.26
PDPK1-211ENST00000478708 RB1CC1Q8TDY2 1594 aa39.92■■■■□ 3.98
PDPK1-211ENST00000478708 NACADO15069 1562 aa39.74■■■■□ 3.95
PDPK1-211ENST00000478708 DCAF8L2P0C7V8 631 aa39.69■■■■□ 3.94
PDPK1-211ENST00000478708 MYO15BQ96JP2 1530 aa39.35■■■■□ 3.89
PDPK1-211ENST00000478708 ZCCHC6Q5VYS8 1495 aaKnown RBP38.98■■■■□ 3.83
PDPK1-211ENST00000478708 DCAF1Q9Y4B6 1507 aa38.92■■■■□ 3.82
PDPK1-211ENST00000478708 PABPN1Q86U42 306 aaKnown RBP eCLIP38.84■■■■□ 3.81
PDPK1-211ENST00000478708 DNAJC5BQ9UF47 199 aa38.6■■■■□ 3.77
PDPK1-211ENST00000478708 UNC13AQ9UPW8 1703 aa38.58■■■■□ 3.77
PDPK1-211ENST00000478708 BICRAQ9NZM4 1560 aa38.45■■■■□ 3.75
PDPK1-211ENST00000478708 SHROOM4Q9ULL8 1493 aa38.39■■■■□ 3.74
PDPK1-211ENST00000478708 SCRIBQ14160 1630 aa38.19■■■■□ 3.7
PDPK1-211ENST00000478708 EIF4G1Q04637 1599 aaKnown RBP37.63■■■■□ 3.62
PDPK1-211ENST00000478708 CC2D2AQ9P2K1 1620 aa37.58■■■■□ 3.61
PDPK1-211ENST00000478708 CECR2Q9BXF3 1484 aa37.56■■■■□ 3.6
PDPK1-211ENST00000478708 NCAPD3P42695 1498 aa36.67■■■■□ 3.46
PDPK1-211ENST00000478708 SMARCA2P51531 1590 aa36.57■■■■□ 3.44
PDPK1-211ENST00000478708 ATAD2BQ9ULI0 1458 aa36.54■■■■□ 3.44
PDPK1-211ENST00000478708 BAZ1AQ9NRL2 1556 aaPredicted RBP36.53■■■■□ 3.44
PDPK1-211ENST00000478708 SMARCA4P51532 1647 aa36.5■■■■□ 3.43
PDPK1-211ENST00000478708 HMGXB3Q12766 1538 aa36.39■■■■□ 3.42
PDPK1-211ENST00000478708 BAZ1BQ9UIG0 1483 aaKnown RBP36.28■■■■□ 3.4
PDPK1-211ENST00000478708 PEG3Q9GZU2 1588 aa36.2■■■■□ 3.39
PDPK1-211ENST00000478708 ERCC6Q03468 1493 aa36.11■■■■□ 3.37
PDPK1-211ENST00000478708 MROH2BQ7Z745 1585 aa36.09■■■■□ 3.37
PDPK1-211ENST00000478708 CUX2O14529 1486 aa35.92■■■■□ 3.34
PDPK1-211ENST00000478708 LAMC3Q9Y6N6 1575 aa35.78■■■■□ 3.32
PDPK1-211ENST00000478708 NESP48681 1621 aa35.75■■■■□ 3.31
PDPK1-211ENST00000478708 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
PDPK1-211ENST00000478708 CADPSQ9ULU8 1353 aa35.62■■■■□ 3.29
PDPK1-211ENST00000478708 WIZO95785 1651 aa35.6■■■■□ 3.29
PDPK1-211ENST00000478708 RSF1Q96T23 1441 aaPredicted RBP35.57■■■■□ 3.29
PDPK1-211ENST00000478708 DNAJC5Q9H3Z4 198 aa35.47■■■■□ 3.27
PDPK1-211ENST00000478708 TOP2AP11388 1531 aaKnown RBP35.36■■■■□ 3.25
PDPK1-211ENST00000478708 THOC2Q8NI27 1593 aaKnown RBP35.33■■■■□ 3.25
PDPK1-211ENST00000478708 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
PDPK1-211ENST00000478708 MRC2Q9UBG0 1479 aa35.23■■■■□ 3.23
PDPK1-211ENST00000478708 CFTRP13569 1480 aa35.22■■■■□ 3.23
PDPK1-211ENST00000478708 CEP164Q9UPV0 1460 aa35.2■■■■□ 3.23
PDPK1-211ENST00000478708 FANCD2Q9BXW9 1451 aa35.14■■■■□ 3.22
PDPK1-211ENST00000478708 WDR62O43379 1518 aa35.06■■■■□ 3.2
PDPK1-211ENST00000478708 CCDC88BA6NC98 1476 aa34.93■■■■□ 3.18
PDPK1-211ENST00000478708 URB2Q14146 1524 aaKnown RBP34.69■■■■□ 3.14
PDPK1-211ENST00000478708 PRDM2Q13029 1718 aa34.69■■■■□ 3.14
PDPK1-211ENST00000478708 ABCC8Q09428 1581 aa34.66■■■■□ 3.14
PDPK1-211ENST00000478708 IFT140Q96RY7 1462 aa34.51■■■■□ 3.11
PDPK1-211ENST00000478708 TOPBP1Q92547 1522 aa34.45■■■■□ 3.11
PDPK1-211ENST00000478708 OSCARQ8IYS5 282 aa34.44■■■■□ 3.1
PDPK1-211ENST00000478708 DNMBPQ6XZF7 1577 aa34.39■■■■□ 3.1
PDPK1-211ENST00000478708 SUPT5HO00267 1087 aaKnown RBP34.36■■■■□ 3.09
PDPK1-211ENST00000478708 ZNF608Q9ULD9 1512 aaPredicted RBP34.19■■■■□ 3.06
PDPK1-211ENST00000478708 POLA1P09884 1462 aaPredicted RBP34.13■■■■□ 3.05
PDPK1-211ENST00000478708 SOGA1O94964 1423 aa34.1■■■■□ 3.05
PDPK1-211ENST00000478708 TRIM41Q8WV44 630 aa34.06■■■■□ 3.04
PDPK1-211ENST00000478708 EIF4G3O43432 1585 aaKnown RBP34.04■■■■□ 3.04
PDPK1-211ENST00000478708 TARBP1Q13395 1621 aaKnown RBP34.02■■■■□ 3.04
PDPK1-211ENST00000478708 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.03
PDPK1-211ENST00000478708 FGD5Q6ZNL6 1462 aa33.96■■■■□ 3.03
PDPK1-211ENST00000478708 WDR97A6NE52 1622 aa33.95■■■■□ 3.03
PDPK1-211ENST00000478708 RAD54L2Q9Y4B4 1467 aa33.93■■■■□ 3.02
PDPK1-211ENST00000478708 FBLN2P98095 1184 aa33.92■■■■□ 3.02
PDPK1-211ENST00000478708 CUX1P39880 1505 aa33.9■■■■□ 3.02
PDPK1-211ENST00000478708 TDRD9Q8NDG6 1382 aaKnown RBP33.9■■■■□ 3.02
PDPK1-211ENST00000478708 CHMP7Q8WUX9 453 aaPredicted RBP33.78■■■■□ 3
PDPK1-211ENST00000478708 GRIN2BQ13224 1484 aa33.77■■■■□ 3
PDPK1-211ENST00000478708 MAGI1Q96QZ7 1491 aaPredicted RBP33.75■■■□□ 2.99
PDPK1-211ENST00000478708 WRNQ14191 1432 aaPredicted RBP eCLIP33.71■■■□□ 2.99
PDPK1-211ENST00000478708 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
PDPK1-211ENST00000478708 GAPVD1Q14C86 1478 aa33.66■■■□□ 2.98
PDPK1-211ENST00000478708 ABCA10Q8WWZ4 1543 aa33.66■■■□□ 2.98
PDPK1-211ENST00000478708 ARHGEF11O15085 1522 aa33.64■■■□□ 2.98
PDPK1-211ENST00000478708 CHD1O14646 1710 aa33.62■■■□□ 2.97
PDPK1-211ENST00000478708 RIMBP3CA6NJZ7 1639 aa33.61■■■□□ 2.97
PDPK1-211ENST00000478708 RIMBP3BA6NNM3 1639 aa33.61■■■□□ 2.97
PDPK1-211ENST00000478708 RIMBP3Q9UFD9 1639 aa33.61■■■□□ 2.97
PDPK1-211ENST00000478708 SYNJ2O15056 1496 aa33.6■■■□□ 2.97
PDPK1-211ENST00000478708 SYNJ1O43426 1573 aa33.54■■■□□ 2.96
PDPK1-211ENST00000478708 TOP2BQ02880 1626 aa33.52■■■□□ 2.96
PDPK1-211ENST00000478708 CYB5RLQ6IPT4 315 aa33.51■■■□□ 2.95
PDPK1-211ENST00000478708 BIVM-ERCC5R4GMW8 1640 aa33.46■■■□□ 2.95
PDPK1-211ENST00000478708 ABCA5Q8WWZ7 1642 aa33.43■■■□□ 2.94
PDPK1-211ENST00000478708 PBRM1Q86U86 1689 aa33.4■■■□□ 2.94
PDPK1-211ENST00000478708 CLASP1Q7Z460 1538 aa33.35■■■□□ 2.93
PDPK1-211ENST00000478708 FHAD1B1AJZ9 1412 aa33.3■■■□□ 2.92
PDPK1-211ENST00000478708 ARAP1Q96P48 1450 aa33.28■■■□□ 2.92
PDPK1-211ENST00000478708 ERICH3Q5RHP9 1530 aa33.28■■■□□ 2.92
PDPK1-211ENST00000478708 GRIN2AQ12879 1464 aa33.26■■■□□ 2.92
PDPK1-211ENST00000478708 ADAMTS12P58397 1594 aa33.19■■■□□ 2.9
PDPK1-211ENST00000478708 NUP160Q12769 1436 aa33.13■■■□□ 2.89
PDPK1-211ENST00000478708 TRHP20396 242 aaPredicted RBP33.12■■■□□ 2.89
PDPK1-211ENST00000478708 KIF27Q86VH2 1401 aa33.09■■■□□ 2.89
PDPK1-211ENST00000478708 CEP170Q5SW79 1584 aa32.97■■■□□ 2.87
PDPK1-211ENST00000478708 JPH4Q96JJ6 628 aa32.92■■■□□ 2.86
PDPK1-211ENST00000478708 IGF1RP08069 1367 aa32.91■■■□□ 2.86
PDPK1-211ENST00000478708 SHROOM2Q13796 1616 aa32.83■■■□□ 2.85
PDPK1-211ENST00000478708 PRG4Q92954 1404 aaPredicted RBP32.83■■■□□ 2.85
PDPK1-211ENST00000478708 CUL7Q14999 1698 aa32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms