RNA–Protein interactions for RNA: ENST00000478678.5

PBX2-202, Transcript of PBX homeobox 2, humanhuman

TSL 1 (best)

Gene PBX2, Length 1,320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX2-202ENST00000478678 NISCHQ9Y2I1 1504 aa55.13■■■■■ 6.42
PBX2-202ENST00000478678 CCDC180Q9P1Z9 1646 aa49.22■■■■■ 5.47
PBX2-202ENST00000478678 ABCC9O60706 1549 aa48.87■■■■■ 5.41
PBX2-202ENST00000478678 RB1CC1Q8TDY2 1594 aa46.6■■■■■ 5.05
PBX2-202ENST00000478678 NACADO15069 1562 aa46.37■■■■■ 5.01
PBX2-202ENST00000478678 DCAF8L2P0C7V8 631 aa46.35■■■■■ 5.01
PBX2-202ENST00000478678 MYO15BQ96JP2 1530 aa45.83■■■■■ 4.93
PBX2-202ENST00000478678 ZCCHC6Q5VYS8 1495 aaKnown RBP45.81■■■■■ 4.92
PBX2-202ENST00000478678 UNC13AQ9UPW8 1703 aa45.72■■■■■ 4.91
PBX2-202ENST00000478678 PABPN1Q86U42 306 aaKnown RBP eCLIP45.57■■■■■ 4.89
PBX2-202ENST00000478678 DCAF1Q9Y4B6 1507 aa45.46■■■■■ 4.87
PBX2-202ENST00000478678 DNAJC5BQ9UF47 199 aa45.4■■■■■ 4.86
PBX2-202ENST00000478678 BICRAQ9NZM4 1560 aa45.34■■■■■ 4.85
PBX2-202ENST00000478678 SCRIBQ14160 1630 aa45.04■■■■■ 4.8
PBX2-202ENST00000478678 SHROOM4Q9ULL8 1493 aa44.54■■■■■ 4.72
PBX2-202ENST00000478678 EIF4G1Q04637 1599 aaKnown RBP44.14■■■■■ 4.66
PBX2-202ENST00000478678 CC2D2AQ9P2K1 1620 aa44.13■■■■■ 4.66
PBX2-202ENST00000478678 CECR2Q9BXF3 1484 aa43.89■■■■■ 4.62
PBX2-202ENST00000478678 SMARCA4P51532 1647 aa42.94■■■■■ 4.46
PBX2-202ENST00000478678 ATAD2BQ9ULI0 1458 aa42.81■■■■■ 4.44
PBX2-202ENST00000478678 NCAPD3P42695 1498 aa42.8■■■■■ 4.44
PBX2-202ENST00000478678 BAZ1AQ9NRL2 1556 aaPredicted RBP42.72■■■■■ 4.43
PBX2-202ENST00000478678 SMARCA2P51531 1590 aa42.66■■■■■ 4.42
PBX2-202ENST00000478678 MROH2BQ7Z745 1585 aa42.56■■■■■ 4.4
PBX2-202ENST00000478678 HMGXB3Q12766 1538 aa42.56■■■■■ 4.4
PBX2-202ENST00000478678 PEG3Q9GZU2 1588 aa42.44■■■■■ 4.38
PBX2-202ENST00000478678 BAZ1BQ9UIG0 1483 aaKnown RBP42.43■■■■■ 4.38
PBX2-202ENST00000478678 NESP48681 1621 aa42.15■■■■■ 4.34
PBX2-202ENST00000478678 WIZO95785 1651 aa42.12■■■■■ 4.33
PBX2-202ENST00000478678 ERCC6Q03468 1493 aa42.07■■■■■ 4.33
PBX2-202ENST00000478678 RSF1Q96T23 1441 aaPredicted RBP41.81■■■■■ 4.28
PBX2-202ENST00000478678 LAMC3Q9Y6N6 1575 aa41.78■■■■■ 4.28
PBX2-202ENST00000478678 CUX2O14529 1486 aa41.75■■■■■ 4.27
PBX2-202ENST00000478678 KIF21AQ7Z4S6 1674 aa41.63■■■■■ 4.25
PBX2-202ENST00000478678 DNAJC5Q9H3Z4 198 aa41.6■■■■■ 4.25
PBX2-202ENST00000478678 THOC2Q8NI27 1593 aaKnown RBP41.58■■■■■ 4.25
PBX2-202ENST00000478678 CADPSQ9ULU8 1353 aa41.54■■■■■ 4.24
PBX2-202ENST00000478678 TOP2AP11388 1531 aaKnown RBP41.53■■■■■ 4.24
PBX2-202ENST00000478678 PDS5BQ9NTI5 1447 aa41.47■■■■■ 4.23
PBX2-202ENST00000478678 CFTRP13569 1480 aa41.19■■■■■ 4.18
PBX2-202ENST00000478678 MRC2Q9UBG0 1479 aa41.17■■■■■ 4.18
PBX2-202ENST00000478678 FANCD2Q9BXW9 1451 aa41.13■■■■■ 4.18
PBX2-202ENST00000478678 CEP164Q9UPV0 1460 aa41.11■■■■■ 4.17
PBX2-202ENST00000478678 CCDC88BA6NC98 1476 aa41.07■■■■■ 4.17
PBX2-202ENST00000478678 WDR62O43379 1518 aa41.06■■■■■ 4.16
PBX2-202ENST00000478678 PRDM2Q13029 1718 aa40.89■■■■■ 4.14
PBX2-202ENST00000478678 URB2Q14146 1524 aaKnown RBP40.81■■■■■ 4.12
PBX2-202ENST00000478678 TOPBP1Q92547 1522 aa40.43■■■■■ 4.06
PBX2-202ENST00000478678 SUPT5HO00267 1087 aaKnown RBP40.4■■■■■ 4.06
PBX2-202ENST00000478678 DNMBPQ6XZF7 1577 aa40.3■■■■■ 4.04
PBX2-202ENST00000478678 ZNF608Q9ULD9 1512 aaPredicted RBP40.26■■■■■ 4.04
PBX2-202ENST00000478678 IFT140Q96RY7 1462 aa40.23■■■■■ 4.03
PBX2-202ENST00000478678 ABCC8Q09428 1581 aa40.2■■■■■ 4.03
PBX2-202ENST00000478678 POLA1P09884 1462 aaPredicted RBP40.05■■■■■ 4
PBX2-202ENST00000478678 EIF4G3O43432 1585 aaKnown RBP40.05■■■■■ 4
PBX2-202ENST00000478678 TARBP1Q13395 1621 aaKnown RBP40.05■■■■■ 4
PBX2-202ENST00000478678 RAD54L2Q9Y4B4 1467 aa39.96■■■■□ 3.99
PBX2-202ENST00000478678 CUX1P39880 1505 aa39.95■■■■□ 3.99
PBX2-202ENST00000478678 AQRO60306 1485 aaKnown RBP eCLIP39.92■■■■□ 3.982e-7■■■■■ 55.5
PBX2-202ENST00000478678 OSCARQ8IYS5 282 aa39.9■■■■□ 3.98
PBX2-202ENST00000478678 FGD5Q6ZNL6 1462 aa39.89■■■■□ 3.98
PBX2-202ENST00000478678 SOGA1O94964 1423 aa39.83■■■■□ 3.97
PBX2-202ENST00000478678 TDRD9Q8NDG6 1382 aaKnown RBP39.75■■■■□ 3.95
PBX2-202ENST00000478678 TRIM41Q8WV44 630 aa39.71■■■■□ 3.95
PBX2-202ENST00000478678 CHD1O14646 1710 aa39.68■■■■□ 3.94
PBX2-202ENST00000478678 WDR97A6NE52 1622 aa39.62■■■■□ 3.93
PBX2-202ENST00000478678 SNAPC4Q5SXM2 1469 aa39.53■■■■□ 3.92
PBX2-202ENST00000478678 FBLN2P98095 1184 aa39.52■■■■□ 3.92
PBX2-202ENST00000478678 RIMBP3CA6NJZ7 1639 aa39.49■■■■□ 3.91
PBX2-202ENST00000478678 RIMBP3BA6NNM3 1639 aa39.49■■■■□ 3.91
PBX2-202ENST00000478678 RIMBP3Q9UFD9 1639 aa39.49■■■■□ 3.91
PBX2-202ENST00000478678 SYNJ1O43426 1573 aa39.46■■■■□ 3.91
PBX2-202ENST00000478678 BIVM-ERCC5R4GMW8 1640 aa39.41■■■■□ 3.9
PBX2-202ENST00000478678 GRIN2BQ13224 1484 aa39.41■■■■□ 3.9
PBX2-202ENST00000478678 PBRM1Q86U86 1689 aa39.41■■■■□ 3.9
PBX2-202ENST00000478678 WRNQ14191 1432 aaPredicted RBP eCLIP39.41■■■■□ 3.9
PBX2-202ENST00000478678 ABCA10Q8WWZ4 1543 aa39.4■■■■□ 3.9
PBX2-202ENST00000478678 TOP2BQ02880 1626 aa39.4■■■■□ 3.9
PBX2-202ENST00000478678 ARHGEF11O15085 1522 aa39.39■■■■□ 3.9
PBX2-202ENST00000478678 GAPVD1Q14C86 1478 aa39.36■■■■□ 3.89
PBX2-202ENST00000478678 ABCA5Q8WWZ7 1642 aa39.36■■■■□ 3.89
PBX2-202ENST00000478678 MAGI1Q96QZ7 1491 aaPredicted RBP39.34■■■■□ 3.89
PBX2-202ENST00000478678 CHMP7Q8WUX9 453 aaPredicted RBP39.24■■■■□ 3.87
PBX2-202ENST00000478678 SYNJ2O15056 1496 aa39.23■■■■□ 3.87
PBX2-202ENST00000478678 CLASP1Q7Z460 1538 aa39.17■■■■□ 3.86
PBX2-202ENST00000478678 ARAP1Q96P48 1450 aa39.06■■■■□ 3.84
PBX2-202ENST00000478678 ADAMTS12P58397 1594 aa39.03■■■■□ 3.84
PBX2-202ENST00000478678 CYB5RLQ6IPT4 315 aa39.03■■■■□ 3.84
PBX2-202ENST00000478678 GRIN2AQ12879 1464 aa38.94■■■■□ 3.82
PBX2-202ENST00000478678 ERICH3Q5RHP9 1530 aa38.89■■■■□ 3.82
PBX2-202ENST00000478678 CEP170Q5SW79 1584 aa38.86■■■■□ 3.81
PBX2-202ENST00000478678 FHAD1B1AJZ9 1412 aa38.85■■■■□ 3.81
PBX2-202ENST00000478678 NUP160Q12769 1436 aa38.77■■■■□ 3.8
PBX2-202ENST00000478678 ERCC6L2Q5T890 1561 aa38.72■■■■□ 3.79
PBX2-202ENST00000478678 SHROOM2Q13796 1616 aa38.58■■■■□ 3.77
PBX2-202ENST00000478678 KIF27Q86VH2 1401 aa38.58■■■■□ 3.77
PBX2-202ENST00000478678 IGF1RP08069 1367 aa38.54■■■■□ 3.76
PBX2-202ENST00000478678 RUSC2Q8N2Y8 1516 aa38.48■■■■□ 3.75
PBX2-202ENST00000478678 CUL7Q14999 1698 aa38.45■■■■□ 3.75
PBX2-202ENST00000478678 TRHP20396 242 aaPredicted RBP38.42■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms