RNA–Protein interactions for RNA: ENST00000478672.1

CCZ1-204, Transcript of CCZ1 homolog, vacuolar protein trafficking and biogenesis associated, humanhuman

TSL 2

Gene CCZ1, Length 2,062 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCZ1-204ENST00000478672 NISCHQ9Y2I1 1504 aa61.72■■■■■ 7.47
CCZ1-204ENST00000478672 CCDC180Q9P1Z9 1646 aa53.82■■■■■ 6.21
CCZ1-204ENST00000478672 ZCCHC6Q5VYS8 1495 aaKnown RBP51.79■■■■■ 5.88
CCZ1-204ENST00000478672 DCAF8L2P0C7V8 631 aa51.3■■■■■ 5.8
CCZ1-204ENST00000478672 ABCC9O60706 1549 aa51.25■■■■■ 5.8
CCZ1-204ENST00000478672 DCAF1Q9Y4B6 1507 aa50.95■■■■■ 5.75
CCZ1-204ENST00000478672 SHROOM4Q9ULL8 1493 aa50.42■■■■■ 5.66
CCZ1-204ENST00000478672 MYO15BQ96JP2 1530 aa50.4■■■■■ 5.66
CCZ1-204ENST00000478672 NACADO15069 1562 aa50.22■■■■■ 5.63
CCZ1-204ENST00000478672 RB1CC1Q8TDY2 1594 aa49.87■■■■■ 5.57
CCZ1-204ENST00000478672 SCRIBQ14160 1630 aa49.6■■■■■ 5.53
CCZ1-204ENST00000478672 UNC13AQ9UPW8 1703 aa48.8■■■■■ 5.4
CCZ1-204ENST00000478672 SUPT5HO00267 1087 aaKnown RBP48.44■■■■■ 5.34
CCZ1-204ENST00000478672 PABPN1Q86U42 306 aaKnown RBP eCLIP48.38■■■■■ 5.33
CCZ1-204ENST00000478672 BICRAQ9NZM4 1560 aa48.34■■■■■ 5.33
CCZ1-204ENST00000478672 CECR2Q9BXF3 1484 aa48.04■■■■■ 5.28
CCZ1-204ENST00000478672 RSF1Q96T23 1441 aaPredicted RBP47.85■■■■■ 5.25
CCZ1-204ENST00000478672 MROH2BQ7Z745 1585 aa47.71■■■■■ 5.23
CCZ1-204ENST00000478672 BAZ1AQ9NRL2 1556 aaPredicted RBP47.67■■■■■ 5.22
CCZ1-204ENST00000478672 SMARCA4P51532 1647 aa47.48■■■■■ 5.19
CCZ1-204ENST00000478672 WIZO95785 1651 aa47.31■■■■■ 5.16
CCZ1-204ENST00000478672 EIF4G1Q04637 1599 aaKnown RBP46.93■■■■■ 5.1
CCZ1-204ENST00000478672 PEG3Q9GZU2 1588 aa46.84■■■■■ 5.09
CCZ1-204ENST00000478672 TOP2AP11388 1531 aaKnown RBP46.78■■■■■ 5.08
CCZ1-204ENST00000478672 ATAD2BQ9ULI0 1458 aa46.78■■■■■ 5.08
CCZ1-204ENST00000478672 SMARCA2P51531 1590 aa46.72■■■■■ 5.07
CCZ1-204ENST00000478672 BAZ1BQ9UIG0 1483 aaKnown RBP46.53■■■■■ 5.04
CCZ1-204ENST00000478672 NCAPD3P42695 1498 aa46.38■■■■■ 5.02
CCZ1-204ENST00000478672 CCDC88BA6NC98 1476 aa46.36■■■■■ 5.01
CCZ1-204ENST00000478672 CC2D2AQ9P2K1 1620 aa46.3■■■■■ 5
CCZ1-204ENST00000478672 HMGXB3Q12766 1538 aa46.27■■■■■ 5
CCZ1-204ENST00000478672 CHIC1Q5VXU3 224 aa46.18■■■■■ 4.98
CCZ1-204ENST00000478672 TRIM41Q8WV44 630 aa45.52■■■■■ 4.88
CCZ1-204ENST00000478672 DNAJC5BQ9UF47 199 aa45.4■■■■■ 4.86
CCZ1-204ENST00000478672 ABCC8Q09428 1581 aa45.33■■■■■ 4.85
CCZ1-204ENST00000478672 CFTRP13569 1480 aa45.31■■■■■ 4.84
CCZ1-204ENST00000478672 CADPSQ9ULU8 1353 aa45.23■■■■■ 4.83
CCZ1-204ENST00000478672 WRNQ14191 1432 aaPredicted RBP eCLIP45.06■■■■■ 4.8
CCZ1-204ENST00000478672 PRDM2Q13029 1718 aa44.96■■■■■ 4.79
CCZ1-204ENST00000478672 NESP48681 1621 aa44.92■■■■■ 4.78
CCZ1-204ENST00000478672 SYNJ1O43426 1573 aa44.85■■■■■ 4.77
CCZ1-204ENST00000478672 LAMC3Q9Y6N6 1575 aa44.82■■■■■ 4.77
CCZ1-204ENST00000478672 FAM9AQ8IZU1 332 aaPredicted RBP44.75■■■■■ 4.75
CCZ1-204ENST00000478672 FANCD2Q9BXW9 1451 aa44.73■■■■■ 4.75
CCZ1-204ENST00000478672 TOP2BQ02880 1626 aa44.65■■■■■ 4.74
CCZ1-204ENST00000478672 CUX1P39880 1505 aa44.61■■■■■ 4.73
CCZ1-204ENST00000478672 BIVM-ERCC5R4GMW8 1640 aa44.58■■■■■ 4.73
CCZ1-204ENST00000478672 PDS5BQ9NTI5 1447 aa44.55■■■■■ 4.72
CCZ1-204ENST00000478672 LOC105371045A0A1W2PR82 267 aa44.48■■■■■ 4.71
CCZ1-204ENST00000478672 SOGA1O94964 1423 aa44.47■■■■■ 4.71
CCZ1-204ENST00000478672 CEP164Q9UPV0 1460 aa44.46■■■■■ 4.71
CCZ1-204ENST00000478672 RUSC2Q8N2Y8 1516 aa44.31■■■■■ 4.68
CCZ1-204ENST00000478672 KIF21AQ7Z4S6 1674 aa44.3■■■■■ 4.68
CCZ1-204ENST00000478672 EEA1Q15075 1411 aa44.27■■■■■ 4.68
CCZ1-204ENST00000478672 DNMBPQ6XZF7 1577 aa44.25■■■■■ 4.67
CCZ1-204ENST00000478672 TOPBP1Q92547 1522 aa44.21■■■■■ 4.67
CCZ1-204ENST00000478672 EHMT2Q96KQ7 1210 aa44.2■■■■■ 4.67
CCZ1-204ENST00000478672 FGD5Q6ZNL6 1462 aa44.18■■■■■ 4.66
CCZ1-204ENST00000478672 URB2Q14146 1524 aaKnown RBP44.17■■■■■ 4.66
CCZ1-204ENST00000478672 CSRNP3Q8WYN3 585 aa44.15■■■■■ 4.66
CCZ1-204ENST00000478672 POLA1P09884 1462 aaPredicted RBP43.99■■■■■ 4.63
CCZ1-204ENST00000478672 ERCC6Q03468 1493 aa43.97■■■■■ 4.63
CCZ1-204ENST00000478672 MRC2Q9UBG0 1479 aa43.96■■■■■ 4.63
CCZ1-204ENST00000478672 KIF27Q86VH2 1401 aa43.94■■■■■ 4.63
CCZ1-204ENST00000478672 CUX2O14529 1486 aa43.89■■■■■ 4.62
CCZ1-204ENST00000478672 RAD54L2Q9Y4B4 1467 aa43.89■■■■■ 4.62
CCZ1-204ENST00000478672 ABCA10Q8WWZ4 1543 aa43.75■■■■■ 4.59
CCZ1-204ENST00000478672 WDR62O43379 1518 aa43.69■■■■■ 4.58
CCZ1-204ENST00000478672 GOLGA3Q08378 1498 aa43.69■■■■■ 4.58
CCZ1-204ENST00000478672 KIF21BO75037 1637 aa43.67■■■■■ 4.58
CCZ1-204ENST00000478672 UBTFP17480 764 aaKnown RBP43.64■■■■■ 4.58
CCZ1-204ENST00000478672 THOC2Q8NI27 1593 aaKnown RBP43.59■■■■■ 4.57
CCZ1-204ENST00000478672 IGF1RP08069 1367 aa43.58■■■■■ 4.57
CCZ1-204ENST00000478672 PRXQ9BXM0 1461 aa43.55■■■■■ 4.56
CCZ1-204ENST00000478672 RAPGEF2Q9Y4G8 1499 aa43.55■■■■■ 4.56
CCZ1-204ENST00000478672 WDR97A6NE52 1622 aa43.55■■■■■ 4.56
CCZ1-204ENST00000478672 TARBP1Q13395 1621 aaKnown RBP43.52■■■■■ 4.56
CCZ1-204ENST00000478672 TNIKQ9UKE5 1360 aa43.52■■■■■ 4.56
CCZ1-204ENST00000478672 TDRD9Q8NDG6 1382 aaKnown RBP43.51■■■■■ 4.56
CCZ1-204ENST00000478672 ERICH3Q5RHP9 1530 aa43.43■■■■■ 4.54
CCZ1-204ENST00000478672 IFT140Q96RY7 1462 aa43.4■■■■■ 4.54
CCZ1-204ENST00000478672 GAPVD1Q14C86 1478 aa43.38■■■■■ 4.53
CCZ1-204ENST00000478672 CARMIL1Q5VZK9 1371 aa43.38■■■■■ 4.53
CCZ1-204ENST00000478672 ABCA5Q8WWZ7 1642 aa43.37■■■■■ 4.53
CCZ1-204ENST00000478672 CEP162Q5TB80 1403 aa43.3■■■■■ 4.52
CCZ1-204ENST00000478672 AQRO60306 1485 aaKnown RBP eCLIP43.25■■■■■ 4.51
CCZ1-204ENST00000478672 ZNF608Q9ULD9 1512 aaPredicted RBP43.2■■■■■ 4.51
CCZ1-204ENST00000478672 CUL7Q14999 1698 aa43.18■■■■■ 4.5
CCZ1-204ENST00000478672 RANGAP1P46060 587 aaPredicted RBP43.07■■■■■ 4.49
CCZ1-204ENST00000478672 PBRM1Q86U86 1689 aa43.07■■■■■ 4.49
CCZ1-204ENST00000478672 GRIN2BQ13224 1484 aa43.05■■■■■ 4.48
CCZ1-204ENST00000478672 CLIP1P30622 1438 aa43.02■■■■■ 4.48
CCZ1-204ENST00000478672 EIF4G3O43432 1585 aaKnown RBP43■■■■■ 4.47
CCZ1-204ENST00000478672 FHAD1B1AJZ9 1412 aa42.89■■■■■ 4.46
CCZ1-204ENST00000478672 ADAMTS12P58397 1594 aa42.84■■■■■ 4.45
CCZ1-204ENST00000478672 SNAPC4Q5SXM2 1469 aa42.81■■■■■ 4.44
CCZ1-204ENST00000478672 MAGI1Q96QZ7 1491 aaPredicted RBP42.68■■■■■ 4.42
CCZ1-204ENST00000478672 CTTNBP2Q8WZ74 1663 aa42.66■■■■■ 4.42
CCZ1-204ENST00000478672 ARHGAP35Q9NRY4 1499 aa42.61■■■■■ 4.41
CCZ1-204ENST00000478672 ARAP1Q96P48 1450 aa42.58■■■■■ 4.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms