RNA–Protein interactions for RNA: ENST00000478670.5

BUD23-216, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 4

Gene BUD23, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-216ENST00000478670 NISCHQ9Y2I1 1504 aa45.36■■■■■ 4.85
BUD23-216ENST00000478670 CCDC180Q9P1Z9 1646 aa40.47■■■■■ 4.07
BUD23-216ENST00000478670 ABCC9O60706 1549 aa39.45■■■■□ 3.91
BUD23-216ENST00000478670 RB1CC1Q8TDY2 1594 aa38.06■■■■□ 3.68
BUD23-216ENST00000478670 NACADO15069 1562 aa38■■■■□ 3.67
BUD23-216ENST00000478670 DCAF8L2P0C7V8 631 aa37.87■■■■□ 3.65
BUD23-216ENST00000478670 ZCCHC6Q5VYS8 1495 aaKnown RBP37.8■■■■□ 3.64
BUD23-216ENST00000478670 MYO15BQ96JP2 1530 aa37.75■■■■□ 3.63
BUD23-216ENST00000478670 DCAF1Q9Y4B6 1507 aa37.58■■■■□ 3.61
BUD23-216ENST00000478670 UNC13AQ9UPW8 1703 aa37.2■■■■□ 3.55
BUD23-216ENST00000478670 SCRIBQ14160 1630 aa36.84■■■■□ 3.49
BUD23-216ENST00000478670 BICRAQ9NZM4 1560 aa36.79■■■■□ 3.48
BUD23-216ENST00000478670 PABPN1Q86U42 306 aaKnown RBP eCLIP36.78■■■■□ 3.48
BUD23-216ENST00000478670 SHROOM4Q9ULL8 1493 aa36.55■■■■□ 3.44
BUD23-216ENST00000478670 DNAJC5BQ9UF47 199 aa36.04■■■■□ 3.36
BUD23-216ENST00000478670 EIF4G1Q04637 1599 aaKnown RBP35.88■■■■□ 3.33
BUD23-216ENST00000478670 CC2D2AQ9P2K1 1620 aa35.73■■■■□ 3.31
BUD23-216ENST00000478670 CECR2Q9BXF3 1484 aa35.47■■■■□ 3.27
BUD23-216ENST00000478670 SMARCA4P51532 1647 aa35.24■■■■□ 3.23
BUD23-216ENST00000478670 BAZ1AQ9NRL2 1556 aaPredicted RBP35.23■■■■□ 3.23
BUD23-216ENST00000478670 SMARCA2P51531 1590 aa35.04■■■■□ 3.2
BUD23-216ENST00000478670 ATAD2BQ9ULI0 1458 aa34.99■■■■□ 3.19
BUD23-216ENST00000478670 NCAPD3P42695 1498 aa34.98■■■■□ 3.19
BUD23-216ENST00000478670 MROH2BQ7Z745 1585 aa34.92■■■■□ 3.18
BUD23-216ENST00000478670 PEG3Q9GZU2 1588 aa34.9■■■■□ 3.18
BUD23-216ENST00000478670 HMGXB3Q12766 1538 aa34.89■■■■□ 3.18
BUD23-216ENST00000478670 BAZ1BQ9UIG0 1483 aaKnown RBP34.78■■■■□ 3.16
BUD23-216ENST00000478670 WIZO95785 1651 aa34.6■■■■□ 3.13
BUD23-216ENST00000478670 RSF1Q96T23 1441 aaPredicted RBP34.5■■■■□ 3.11
BUD23-216ENST00000478670 TOP2AP11388 1531 aaKnown RBP34.26■■■■□ 3.08
BUD23-216ENST00000478670 LAMC3Q9Y6N6 1575 aa34.15■■■■□ 3.06
BUD23-216ENST00000478670 NESP48681 1621 aa34.1■■■■□ 3.05
BUD23-216ENST00000478670 ERCC6Q03468 1493 aa34.09■■■■□ 3.05
BUD23-216ENST00000478670 CADPSQ9ULU8 1353 aa33.96■■■■□ 3.03
BUD23-216ENST00000478670 PDS5BQ9NTI5 1447 aa33.88■■■■□ 3.01
BUD23-216ENST00000478670 KIF21AQ7Z4S6 1674 aa33.83■■■■□ 3.01
BUD23-216ENST00000478670 CCDC88BA6NC98 1476 aa33.78■■■■□ 3
BUD23-216ENST00000478670 CFTRP13569 1480 aa33.76■■■■□ 3
BUD23-216ENST00000478670 CUX2O14529 1486 aa33.72■■■□□ 2.99
BUD23-216ENST00000478670 PRDM2Q13029 1718 aa33.7■■■□□ 2.98
BUD23-216ENST00000478670 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
BUD23-216ENST00000478670 SUPT5HO00267 1087 aaKnown RBP33.62■■■□□ 2.97
BUD23-216ENST00000478670 FANCD2Q9BXW9 1451 aa33.6■■■□□ 2.97
BUD23-216ENST00000478670 CEP164Q9UPV0 1460 aa33.6■■■□□ 2.97
BUD23-216ENST00000478670 MRC2Q9UBG0 1479 aa33.53■■■□□ 2.96
BUD23-216ENST00000478670 WDR62O43379 1518 aa33.43■■■□□ 2.94
BUD23-216ENST00000478670 URB2Q14146 1524 aaKnown RBP33.22■■■□□ 2.91
BUD23-216ENST00000478670 ABCC8Q09428 1581 aa33.13■■■□□ 2.89
BUD23-216ENST00000478670 DNMBPQ6XZF7 1577 aa33.07■■■□□ 2.88
BUD23-216ENST00000478670 TOPBP1Q92547 1522 aa33.06■■■□□ 2.88
BUD23-216ENST00000478670 IFT140Q96RY7 1462 aa32.87■■■□□ 2.85
BUD23-216ENST00000478670 CUX1P39880 1505 aa32.78■■■□□ 2.84
BUD23-216ENST00000478670 POLA1P09884 1462 aaPredicted RBP32.76■■■□□ 2.84
BUD23-216ENST00000478670 TARBP1Q13395 1621 aaKnown RBP32.7■■■□□ 2.83
BUD23-216ENST00000478670 FGD5Q6ZNL6 1462 aa32.7■■■□□ 2.83
BUD23-216ENST00000478670 ZNF608Q9ULD9 1512 aaPredicted RBP32.65■■■□□ 2.82
BUD23-216ENST00000478670 EIF4G3O43432 1585 aaKnown RBP32.63■■■□□ 2.81
BUD23-216ENST00000478670 SOGA1O94964 1423 aa32.62■■■□□ 2.81
BUD23-216ENST00000478670 WRNQ14191 1432 aaPredicted RBP eCLIP32.6■■■□□ 2.81
BUD23-216ENST00000478670 BIVM-ERCC5R4GMW8 1640 aa32.59■■■□□ 2.81
BUD23-216ENST00000478670 RAD54L2Q9Y4B4 1467 aa32.58■■■□□ 2.81
BUD23-216ENST00000478670 DNAJC5Q9H3Z4 198 aa32.57■■■□□ 2.8
BUD23-216ENST00000478670 WDR97A6NE52 1622 aa32.56■■■□□ 2.8
BUD23-216ENST00000478670 TOP2BQ02880 1626 aa32.56■■■□□ 2.8
BUD23-216ENST00000478670 SYNJ1O43426 1573 aa32.51■■■□□ 2.79
BUD23-216ENST00000478670 AQRO60306 1485 aaKnown RBP eCLIP32.46■■■□□ 2.793e-9■■■■■ 36.3
BUD23-216ENST00000478670 TDRD9Q8NDG6 1382 aaKnown RBP32.4■■■□□ 2.78
BUD23-216ENST00000478670 ABCA10Q8WWZ4 1543 aa32.39■■■□□ 2.78
BUD23-216ENST00000478670 PBRM1Q86U86 1689 aa32.31■■■□□ 2.76
BUD23-216ENST00000478670 ABCA5Q8WWZ7 1642 aa32.29■■■□□ 2.76
BUD23-216ENST00000478670 GRIN2BQ13224 1484 aa32.28■■■□□ 2.76
BUD23-216ENST00000478670 GAPVD1Q14C86 1478 aa32.28■■■□□ 2.76
BUD23-216ENST00000478670 OSCARQ8IYS5 282 aa32.26■■■□□ 2.75
BUD23-216ENST00000478670 CHD1O14646 1710 aa32.25■■■□□ 2.75
BUD23-216ENST00000478670 SNAPC4Q5SXM2 1469 aa32.23■■■□□ 2.75
BUD23-216ENST00000478670 MAGI1Q96QZ7 1491 aaPredicted RBP32.23■■■□□ 2.75
BUD23-216ENST00000478670 FBLN2P98095 1184 aa32.11■■■□□ 2.73
BUD23-216ENST00000478670 SYNJ2O15056 1496 aa32.08■■■□□ 2.73
BUD23-216ENST00000478670 CHMP7Q8WUX9 453 aaPredicted RBP32.04■■■□□ 2.72
BUD23-216ENST00000478670 ERICH3Q5RHP9 1530 aa32.04■■■□□ 2.72
BUD23-216ENST00000478670 ADAMTS12P58397 1594 aa31.99■■■□□ 2.71
BUD23-216ENST00000478670 KIF27Q86VH2 1401 aa31.94■■■□□ 2.7
BUD23-216ENST00000478670 FHAD1B1AJZ9 1412 aa31.91■■■□□ 2.7
BUD23-216ENST00000478670 GRIN2AQ12879 1464 aa31.86■■■□□ 2.69
BUD23-216ENST00000478670 CLASP1Q7Z460 1538 aa31.82■■■□□ 2.68
BUD23-216ENST00000478670 CUL7Q14999 1698 aa31.81■■■□□ 2.68
BUD23-216ENST00000478670 TRIM41Q8WV44 630 aa31.81■■■□□ 2.68
BUD23-216ENST00000478670 RIMBP3CA6NJZ7 1639 aa31.79■■■□□ 2.68
BUD23-216ENST00000478670 RIMBP3BA6NNM3 1639 aa31.79■■■□□ 2.68
BUD23-216ENST00000478670 RIMBP3Q9UFD9 1639 aa31.79■■■□□ 2.68
BUD23-216ENST00000478670 ARHGEF11O15085 1522 aa31.77■■■□□ 2.68
BUD23-216ENST00000478670 IGF1RP08069 1367 aa31.71■■■□□ 2.67
BUD23-216ENST00000478670 NUP160Q12769 1436 aa31.69■■■□□ 2.66
BUD23-216ENST00000478670 CEP170Q5SW79 1584 aa31.68■■■□□ 2.66
BUD23-216ENST00000478670 CARMIL1Q5VZK9 1371 aa31.57■■■□□ 2.64
BUD23-216ENST00000478670 RUSC2Q8N2Y8 1516 aa31.53■■■□□ 2.64
BUD23-216ENST00000478670 SHROOM2Q13796 1616 aa31.5■■■□□ 2.63
BUD23-216ENST00000478670 ARAP1Q96P48 1450 aa31.47■■■□□ 2.63
BUD23-216ENST00000478670 RAPGEF2Q9Y4G8 1499 aa31.43■■■□□ 2.62
BUD23-216ENST00000478670 KIAA0586Q9BVV6 1533 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms