RNA–Protein interactions for RNA: ENST00000478643.1

MTHFD1L-210, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

TSL 3

Gene MTHFD1L, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-210ENST00000478643 NISCHQ9Y2I1 1504 aa25.09■■□□□ 1.61
MTHFD1L-210ENST00000478643 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
MTHFD1L-210ENST00000478643 ABCC9O60706 1549 aa22.36■■□□□ 1.17
MTHFD1L-210ENST00000478643 RB1CC1Q8TDY2 1594 aa21.27■□□□□ 0.99
MTHFD1L-210ENST00000478643 NACADO15069 1562 aa21.16■□□□□ 0.98
MTHFD1L-210ENST00000478643 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
MTHFD1L-210ENST00000478643 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
MTHFD1L-210ENST00000478643 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
MTHFD1L-210ENST00000478643 UNC13AQ9UPW8 1703 aa20.89■□□□□ 0.93
MTHFD1L-210ENST00000478643 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
MTHFD1L-210ENST00000478643 ZCCHC6Q5VYS8 1495 aaKnown RBP20.82■□□□□ 0.92
MTHFD1L-210ENST00000478643 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.92
MTHFD1L-210ENST00000478643 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
MTHFD1L-210ENST00000478643 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
MTHFD1L-210ENST00000478643 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
MTHFD1L-210ENST00000478643 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
MTHFD1L-210ENST00000478643 EIF4G1Q04637 1599 aaKnown RBP20.18■□□□□ 0.82
MTHFD1L-210ENST00000478643 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
MTHFD1L-210ENST00000478643 NCAPD3P42695 1498 aa19.58■□□□□ 0.72
MTHFD1L-210ENST00000478643 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
MTHFD1L-210ENST00000478643 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
MTHFD1L-210ENST00000478643 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
MTHFD1L-210ENST00000478643 HMGXB3Q12766 1538 aa19.42■□□□□ 0.7
MTHFD1L-210ENST00000478643 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
MTHFD1L-210ENST00000478643 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
MTHFD1L-210ENST00000478643 PEG3Q9GZU2 1588 aa19.36■□□□□ 0.69
MTHFD1L-210ENST00000478643 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
MTHFD1L-210ENST00000478643 NESP48681 1621 aa19.29■□□□□ 0.68
MTHFD1L-210ENST00000478643 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
MTHFD1L-210ENST00000478643 CUX2O14529 1486 aa19.17■□□□□ 0.66
MTHFD1L-210ENST00000478643 WIZO95785 1651 aa19.14■□□□□ 0.65
MTHFD1L-210ENST00000478643 LAMC3Q9Y6N6 1575 aa19.08■□□□□ 0.65
MTHFD1L-210ENST00000478643 DNAJC5Q9H3Z4 198 aa19.08■□□□□ 0.64
MTHFD1L-210ENST00000478643 THOC2Q8NI27 1593 aaKnown RBP19.04■□□□□ 0.64
MTHFD1L-210ENST00000478643 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
MTHFD1L-210ENST00000478643 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
MTHFD1L-210ENST00000478643 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
MTHFD1L-210ENST00000478643 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
MTHFD1L-210ENST00000478643 TOP2AP11388 1531 aaKnown RBP18.85■□□□□ 0.61
MTHFD1L-210ENST00000478643 CFTRP13569 1480 aa18.8■□□□□ 0.6
MTHFD1L-210ENST00000478643 MRC2Q9UBG0 1479 aa18.8■□□□□ 0.6
MTHFD1L-210ENST00000478643 WDR62O43379 1518 aa18.78■□□□□ 0.6
MTHFD1L-210ENST00000478643 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
MTHFD1L-210ENST00000478643 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
MTHFD1L-210ENST00000478643 CCDC88BA6NC98 1476 aa18.68■□□□□ 0.58
MTHFD1L-210ENST00000478643 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.58
MTHFD1L-210ENST00000478643 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
MTHFD1L-210ENST00000478643 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
MTHFD1L-210ENST00000478643 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
MTHFD1L-210ENST00000478643 IFT140Q96RY7 1462 aa18.36■□□□□ 0.53
MTHFD1L-210ENST00000478643 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
MTHFD1L-210ENST00000478643 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
MTHFD1L-210ENST00000478643 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
MTHFD1L-210ENST00000478643 TARBP1Q13395 1621 aaKnown RBP18.29■□□□□ 0.52
MTHFD1L-210ENST00000478643 EIF4G3O43432 1585 aaKnown RBP18.26■□□□□ 0.51
MTHFD1L-210ENST00000478643 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
MTHFD1L-210ENST00000478643 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
MTHFD1L-210ENST00000478643 AQRO60306 1485 aaKnown RBP eCLIP18.22■□□□□ 0.51
MTHFD1L-210ENST00000478643 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
MTHFD1L-210ENST00000478643 CUX1P39880 1505 aa18.18■□□□□ 0.5
MTHFD1L-210ENST00000478643 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
MTHFD1L-210ENST00000478643 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
MTHFD1L-210ENST00000478643 SOGA1O94964 1423 aa18.14■□□□□ 0.49
MTHFD1L-210ENST00000478643 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
MTHFD1L-210ENST00000478643 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
MTHFD1L-210ENST00000478643 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
MTHFD1L-210ENST00000478643 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
MTHFD1L-210ENST00000478643 CHD1O14646 1710 aa18.11■□□□□ 0.49
MTHFD1L-210ENST00000478643 ARHGEF11O15085 1522 aa18.06■□□□□ 0.48
MTHFD1L-210ENST00000478643 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
MTHFD1L-210ENST00000478643 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
MTHFD1L-210ENST00000478643 FBLN2P98095 1184 aa18■□□□□ 0.47
MTHFD1L-210ENST00000478643 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
MTHFD1L-210ENST00000478643 ABCA10Q8WWZ4 1543 aa17.94■□□□□ 0.46
MTHFD1L-210ENST00000478643 MAGI1Q96QZ7 1491 aaPredicted RBP17.94■□□□□ 0.46
MTHFD1L-210ENST00000478643 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
MTHFD1L-210ENST00000478643 ABCA5Q8WWZ7 1642 aa17.92■□□□□ 0.46
MTHFD1L-210ENST00000478643 GAPVD1Q14C86 1478 aa17.92■□□□□ 0.46
MTHFD1L-210ENST00000478643 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
MTHFD1L-210ENST00000478643 PBRM1Q86U86 1689 aa17.92■□□□□ 0.46
MTHFD1L-210ENST00000478643 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
MTHFD1L-210ENST00000478643 SYNJ2O15056 1496 aa17.89■□□□□ 0.45
MTHFD1L-210ENST00000478643 CYB5RLQ6IPT4 315 aa17.89■□□□□ 0.45
MTHFD1L-210ENST00000478643 BIVM-ERCC5R4GMW8 1640 aa17.89■□□□□ 0.45
MTHFD1L-210ENST00000478643 TOP2BQ02880 1626 aa17.88■□□□□ 0.45
MTHFD1L-210ENST00000478643 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
MTHFD1L-210ENST00000478643 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
MTHFD1L-210ENST00000478643 ADAMTS12P58397 1594 aa17.76■□□□□ 0.43
MTHFD1L-210ENST00000478643 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
MTHFD1L-210ENST00000478643 CEP170Q5SW79 1584 aa17.72■□□□□ 0.43
MTHFD1L-210ENST00000478643 NUP160Q12769 1436 aa17.71■□□□□ 0.43
MTHFD1L-210ENST00000478643 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
MTHFD1L-210ENST00000478643 ERICH3Q5RHP9 1530 aa17.7■□□□□ 0.42
MTHFD1L-210ENST00000478643 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
MTHFD1L-210ENST00000478643 SHROOM2Q13796 1616 aa17.62■□□□□ 0.41
MTHFD1L-210ENST00000478643 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
MTHFD1L-210ENST00000478643 IGF1RP08069 1367 aa17.55■□□□□ 0.4
MTHFD1L-210ENST00000478643 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.39
MTHFD1L-210ENST00000478643 PRG4Q92954 1404 aaPredicted RBP17.5■□□□□ 0.39
MTHFD1L-210ENST00000478643 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms