RNA–Protein interactions for RNA: ENST00000478639.1

DVL3-208, Transcript of dishevelled segment polarity protein 3, humanhuman

TSL 3

Gene DVL3, Length 328 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DVL3-208ENST00000478639 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
DVL3-208ENST00000478639 CCDC180Q9P1Z9 1646 aa24.7■■□□□ 1.54
DVL3-208ENST00000478639 ABCC9O60706 1549 aa24.5■■□□□ 1.51
DVL3-208ENST00000478639 DCAF8L2P0C7V8 631 aa23.44■■□□□ 1.34
DVL3-208ENST00000478639 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
DVL3-208ENST00000478639 NACADO15069 1562 aa23.22■■□□□ 1.31
DVL3-208ENST00000478639 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
DVL3-208ENST00000478639 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
DVL3-208ENST00000478639 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
DVL3-208ENST00000478639 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
DVL3-208ENST00000478639 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
DVL3-208ENST00000478639 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
DVL3-208ENST00000478639 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
DVL3-208ENST00000478639 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
DVL3-208ENST00000478639 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
DVL3-208ENST00000478639 EIF4G1Q04637 1599 aaKnown RBP22.11■■□□□ 1.13
DVL3-208ENST00000478639 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
DVL3-208ENST00000478639 CECR2Q9BXF3 1484 aa22.03■■□□□ 1.12
DVL3-208ENST00000478639 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
DVL3-208ENST00000478639 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
DVL3-208ENST00000478639 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.03
DVL3-208ENST00000478639 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
DVL3-208ENST00000478639 DNAJC5Q9H3Z4 198 aa21.44■■□□□ 1.02
DVL3-208ENST00000478639 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
DVL3-208ENST00000478639 SMARCA2P51531 1590 aa21.39■■□□□ 1.01
DVL3-208ENST00000478639 WIZO95785 1651 aa21.36■■□□□ 1.01
DVL3-208ENST00000478639 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
DVL3-208ENST00000478639 HMGXB3Q12766 1538 aa21.31■■□□□ 1
DVL3-208ENST00000478639 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
DVL3-208ENST00000478639 CUX2O14529 1486 aa21.22■□□□□ 0.99
DVL3-208ENST00000478639 NESP48681 1621 aa21.22■□□□□ 0.99
DVL3-208ENST00000478639 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
DVL3-208ENST00000478639 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
DVL3-208ENST00000478639 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
DVL3-208ENST00000478639 TOP2AP11388 1531 aaKnown RBP20.95■□□□□ 0.94
DVL3-208ENST00000478639 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.94
DVL3-208ENST00000478639 CADPSQ9ULU8 1353 aa20.83■□□□□ 0.92
DVL3-208ENST00000478639 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
DVL3-208ENST00000478639 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
DVL3-208ENST00000478639 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
DVL3-208ENST00000478639 CFTRP13569 1480 aa20.69■□□□□ 0.9
DVL3-208ENST00000478639 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
DVL3-208ENST00000478639 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
DVL3-208ENST00000478639 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
DVL3-208ENST00000478639 MRC2Q9UBG0 1479 aa20.61■□□□□ 0.89
DVL3-208ENST00000478639 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
DVL3-208ENST00000478639 WDR62O43379 1518 aa20.54■□□□□ 0.88
DVL3-208ENST00000478639 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
DVL3-208ENST00000478639 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
DVL3-208ENST00000478639 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
DVL3-208ENST00000478639 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
DVL3-208ENST00000478639 ZNF608Q9ULD9 1512 aaPredicted RBP20.25■□□□□ 0.83
DVL3-208ENST00000478639 CUX1P39880 1505 aa20.19■□□□□ 0.82
DVL3-208ENST00000478639 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
DVL3-208ENST00000478639 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
DVL3-208ENST00000478639 TARBP1Q13395 1621 aaKnown RBP20.14■□□□□ 0.81
DVL3-208ENST00000478639 TRIM41Q8WV44 630 aa20.14■□□□□ 0.81
DVL3-208ENST00000478639 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
DVL3-208ENST00000478639 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
DVL3-208ENST00000478639 EIF4G3O43432 1585 aaKnown RBP20.11■□□□□ 0.81
DVL3-208ENST00000478639 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
DVL3-208ENST00000478639 AQRO60306 1485 aaKnown RBP eCLIP20.09■□□□□ 0.81
DVL3-208ENST00000478639 SOGA1O94964 1423 aa20.03■□□□□ 0.8
DVL3-208ENST00000478639 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
DVL3-208ENST00000478639 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
DVL3-208ENST00000478639 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
DVL3-208ENST00000478639 CHD1O14646 1710 aa19.96■□□□□ 0.79
DVL3-208ENST00000478639 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
DVL3-208ENST00000478639 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
DVL3-208ENST00000478639 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
DVL3-208ENST00000478639 FBLN2P98095 1184 aa19.88■□□□□ 0.77
DVL3-208ENST00000478639 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
DVL3-208ENST00000478639 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
DVL3-208ENST00000478639 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
DVL3-208ENST00000478639 ABCA5Q8WWZ7 1642 aa19.81■□□□□ 0.76
DVL3-208ENST00000478639 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
DVL3-208ENST00000478639 ARHGEF11O15085 1522 aa19.78■□□□□ 0.76
DVL3-208ENST00000478639 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.76
DVL3-208ENST00000478639 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.76
DVL3-208ENST00000478639 RIMBP3Q9UFD9 1639 aa19.77■□□□□ 0.76
DVL3-208ENST00000478639 GRIN2BQ13224 1484 aa19.77■□□□□ 0.76
DVL3-208ENST00000478639 MAGI1Q96QZ7 1491 aaPredicted RBP19.69■□□□□ 0.74
DVL3-208ENST00000478639 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
DVL3-208ENST00000478639 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
DVL3-208ENST00000478639 SYNJ2O15056 1496 aa19.66■□□□□ 0.74
DVL3-208ENST00000478639 ADAMTS12P58397 1594 aa19.64■□□□□ 0.73
DVL3-208ENST00000478639 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
DVL3-208ENST00000478639 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
DVL3-208ENST00000478639 CEP170Q5SW79 1584 aa19.56■□□□□ 0.72
DVL3-208ENST00000478639 GRIN2AQ12879 1464 aa19.55■□□□□ 0.72
DVL3-208ENST00000478639 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
DVL3-208ENST00000478639 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
DVL3-208ENST00000478639 ERCC6L2Q5T890 1561 aa19.52■□□□□ 0.71
DVL3-208ENST00000478639 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
DVL3-208ENST00000478639 IGF1RP08069 1367 aa19.47■□□□□ 0.71
DVL3-208ENST00000478639 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
DVL3-208ENST00000478639 NUP160Q12769 1436 aa19.44■□□□□ 0.7
DVL3-208ENST00000478639 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
DVL3-208ENST00000478639 CUL7Q14999 1698 aa19.36■□□□□ 0.69
DVL3-208ENST00000478639 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms