RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 NISCHQ9Y2I1 1504 aa39.46■■■■□ 3.91
CYTH3-206ENST00000478541 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
CYTH3-206ENST00000478541 ABCC9O60706 1549 aa34.63■■■■□ 3.13
CYTH3-206ENST00000478541 RB1CC1Q8TDY2 1594 aa33.27■■■□□ 2.92
CYTH3-206ENST00000478541 NACADO15069 1562 aa33.18■■■□□ 2.9
CYTH3-206ENST00000478541 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
CYTH3-206ENST00000478541 DCAF8L2P0C7V8 631 aa32.93■■■□□ 2.86
CYTH3-206ENST00000478541 ZCCHC6Q5VYS8 1495 aaKnown RBP32.83■■■□□ 2.85
CYTH3-206ENST00000478541 DCAF1Q9Y4B6 1507 aa32.7■■■□□ 2.83
CYTH3-206ENST00000478541 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.8
CYTH3-206ENST00000478541 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
CYTH3-206ENST00000478541 PABPN1Q86U42 306 aaKnown RBP eCLIP32.27■■■□□ 2.76
CYTH3-206ENST00000478541 SCRIBQ14160 1630 aa32.06■■■□□ 2.72
CYTH3-206ENST00000478541 DNAJC5BQ9UF47 199 aa32■■■□□ 2.71
CYTH3-206ENST00000478541 SHROOM4Q9ULL8 1493 aa31.97■■■□□ 2.71
CYTH3-206ENST00000478541 EIF4G1Q04637 1599 aaKnown RBP31.44■■■□□ 2.62
CYTH3-206ENST00000478541 CC2D2AQ9P2K1 1620 aa31.37■■■□□ 2.61
CYTH3-206ENST00000478541 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
CYTH3-206ENST00000478541 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
CYTH3-206ENST00000478541 BAZ1AQ9NRL2 1556 aaPredicted RBP30.62■■■□□ 2.49
CYTH3-206ENST00000478541 NCAPD3P42695 1498 aa30.61■■■□□ 2.49
CYTH3-206ENST00000478541 ATAD2BQ9ULI0 1458 aa30.56■■■□□ 2.48
CYTH3-206ENST00000478541 SMARCA2P51531 1590 aa30.54■■■□□ 2.48
CYTH3-206ENST00000478541 HMGXB3Q12766 1538 aa30.46■■■□□ 2.47
CYTH3-206ENST00000478541 PEG3Q9GZU2 1588 aa30.44■■■□□ 2.46
CYTH3-206ENST00000478541 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
CYTH3-206ENST00000478541 BAZ1BQ9UIG0 1483 aaKnown RBP30.29■■■□□ 2.44
CYTH3-206ENST00000478541 WIZO95785 1651 aa30.06■■■□□ 2.4
CYTH3-206ENST00000478541 RSF1Q96T23 1441 aaPredicted RBP29.94■■■□□ 2.38
CYTH3-206ENST00000478541 NESP48681 1621 aa29.9■■■□□ 2.38
CYTH3-206ENST00000478541 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
CYTH3-206ENST00000478541 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
CYTH3-206ENST00000478541 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
CYTH3-206ENST00000478541 CUX2O14529 1486 aa29.71■■■□□ 2.35
CYTH3-206ENST00000478541 CADPSQ9ULU8 1353 aa29.67■■■□□ 2.34
CYTH3-206ENST00000478541 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
CYTH3-206ENST00000478541 KIF21AQ7Z4S6 1674 aa29.61■■■□□ 2.33
CYTH3-206ENST00000478541 THOC2Q8NI27 1593 aaKnown RBP29.57■■■□□ 2.32
CYTH3-206ENST00000478541 CFTRP13569 1480 aa29.47■■■□□ 2.31
CYTH3-206ENST00000478541 CCDC88BA6NC98 1476 aa29.36■■■□□ 2.29
CYTH3-206ENST00000478541 MRC2Q9UBG0 1479 aa29.34■■■□□ 2.29
CYTH3-206ENST00000478541 FANCD2Q9BXW9 1451 aa29.32■■■□□ 2.28
CYTH3-206ENST00000478541 CEP164Q9UPV0 1460 aa29.32■■■□□ 2.28
CYTH3-206ENST00000478541 PRDM2Q13029 1718 aa29.31■■■□□ 2.28
CYTH3-206ENST00000478541 WDR62O43379 1518 aa29.28■■■□□ 2.28
CYTH3-206ENST00000478541 URB2Q14146 1524 aaKnown RBP29.06■■■□□ 2.24
CYTH3-206ENST00000478541 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
CYTH3-206ENST00000478541 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
CYTH3-206ENST00000478541 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
CYTH3-206ENST00000478541 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
CYTH3-206ENST00000478541 DNMBPQ6XZF7 1577 aa28.81■■■□□ 2.2
CYTH3-206ENST00000478541 IFT140Q96RY7 1462 aa28.73■■■□□ 2.19
CYTH3-206ENST00000478541 ZNF608Q9ULD9 1512 aaPredicted RBP28.59■■■□□ 2.17
CYTH3-206ENST00000478541 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
CYTH3-206ENST00000478541 POLA1P09884 1462 aaPredicted RBP28.58■■■□□ 2.17
CYTH3-206ENST00000478541 EIF4G3O43432 1585 aaKnown RBP28.52■■■□□ 2.16
CYTH3-206ENST00000478541 CUX1P39880 1505 aa28.52■■■□□ 2.16
CYTH3-206ENST00000478541 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
CYTH3-206ENST00000478541 SOGA1O94964 1423 aa28.43■■■□□ 2.14
CYTH3-206ENST00000478541 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
CYTH3-206ENST00000478541 WDR97A6NE52 1622 aa28.39■■■□□ 2.13
CYTH3-206ENST00000478541 AQRO60306 1485 aaKnown RBP eCLIP28.39■■■□□ 2.13
CYTH3-206ENST00000478541 OSCARQ8IYS5 282 aa28.38■■■□□ 2.13
CYTH3-206ENST00000478541 TDRD9Q8NDG6 1382 aaKnown RBP28.28■■■□□ 2.12
CYTH3-206ENST00000478541 BIVM-ERCC5R4GMW8 1640 aa28.27■■■□□ 2.12
CYTH3-206ENST00000478541 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
CYTH3-206ENST00000478541 WRNQ14191 1432 aaPredicted RBP eCLIP28.23■■■□□ 2.11
CYTH3-206ENST00000478541 CHD1O14646 1710 aa28.21■■■□□ 2.11
CYTH3-206ENST00000478541 ABCA10Q8WWZ4 1543 aa28.2■■■□□ 2.1
CYTH3-206ENST00000478541 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
CYTH3-206ENST00000478541 GRIN2BQ13224 1484 aa28.15■■■□□ 2.1
CYTH3-206ENST00000478541 SNAPC4Q5SXM2 1469 aa28.14■■■□□ 2.09
CYTH3-206ENST00000478541 ABCA5Q8WWZ7 1642 aa28.14■■■□□ 2.09
CYTH3-206ENST00000478541 MAGI1Q96QZ7 1491 aaPredicted RBP28.13■■■□□ 2.09
CYTH3-206ENST00000478541 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
CYTH3-206ENST00000478541 GAPVD1Q14C86 1478 aa28.12■■■□□ 2.09
CYTH3-206ENST00000478541 FBLN2P98095 1184 aa28.04■■■□□ 2.08
CYTH3-206ENST00000478541 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
CYTH3-206ENST00000478541 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
CYTH3-206ENST00000478541 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
CYTH3-206ENST00000478541 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
CYTH3-206ENST00000478541 CHMP7Q8WUX9 453 aaPredicted RBP27.97■■■□□ 2.07
CYTH3-206ENST00000478541 ARHGEF11O15085 1522 aa27.95■■■□□ 2.06
CYTH3-206ENST00000478541 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
CYTH3-206ENST00000478541 CLASP1Q7Z460 1538 aa27.9■■■□□ 2.06
CYTH3-206ENST00000478541 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
CYTH3-206ENST00000478541 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
CYTH3-206ENST00000478541 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
CYTH3-206ENST00000478541 FHAD1B1AJZ9 1412 aa27.79■■■□□ 2.04
CYTH3-206ENST00000478541 ARAP1Q96P48 1450 aa27.7■■■□□ 2.02
CYTH3-206ENST00000478541 NUP160Q12769 1436 aa27.69■■■□□ 2.02
CYTH3-206ENST00000478541 CEP170Q5SW79 1584 aa27.68■■■□□ 2.02
CYTH3-206ENST00000478541 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
CYTH3-206ENST00000478541 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.02
CYTH3-206ENST00000478541 CUL7Q14999 1698 aa27.59■■■□□ 2.01
CYTH3-206ENST00000478541 IGF1RP08069 1367 aa27.58■■■□□ 2.01
CYTH3-206ENST00000478541 SHROOM2Q13796 1616 aa27.56■■■□□ 2
CYTH3-206ENST00000478541 RUSC2Q8N2Y8 1516 aa27.47■■□□□ 1.99
CYTH3-206ENST00000478541 ERCC6L2Q5T890 1561 aa27.45■■□□□ 1.99
CYTH3-206ENST00000478541 CARMIL1Q5VZK9 1371 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms