RNA–Protein interactions for RNA: ENST00000478527.1

SDK1-207, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 3

Gene SDK1, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-207ENST00000478527 NISCHQ9Y2I1 1504 aa39■■■■□ 3.83
SDK1-207ENST00000478527 CCDC180Q9P1Z9 1646 aa34.94■■■■□ 3.18
SDK1-207ENST00000478527 ABCC9O60706 1549 aa34.2■■■■□ 3.06
SDK1-207ENST00000478527 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
SDK1-207ENST00000478527 NACADO15069 1562 aa32.77■■■□□ 2.84
SDK1-207ENST00000478527 ZCCHC6Q5VYS8 1495 aaKnown RBP32.52■■■□□ 2.8
SDK1-207ENST00000478527 MYO15BQ96JP2 1530 aa32.51■■■□□ 2.8
SDK1-207ENST00000478527 DCAF8L2P0C7V8 631 aa32.38■■■□□ 2.77
SDK1-207ENST00000478527 UNC13AQ9UPW8 1703 aa32.3■■■□□ 2.76
SDK1-207ENST00000478527 DCAF1Q9Y4B6 1507 aa32.3■■■□□ 2.76
SDK1-207ENST00000478527 BICRAQ9NZM4 1560 aa31.92■■■□□ 2.7
SDK1-207ENST00000478527 SCRIBQ14160 1630 aa31.79■■■□□ 2.68
SDK1-207ENST00000478527 PABPN1Q86U42 306 aaKnown RBP eCLIP31.77■■■□□ 2.68
SDK1-207ENST00000478527 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
SDK1-207ENST00000478527 DNAJC5BQ9UF47 199 aa31.43■■■□□ 2.62
SDK1-207ENST00000478527 EIF4G1Q04637 1599 aaKnown RBP31.08■■■□□ 2.57
SDK1-207ENST00000478527 CC2D2AQ9P2K1 1620 aa31■■■□□ 2.55
SDK1-207ENST00000478527 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
SDK1-207ENST00000478527 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
SDK1-207ENST00000478527 BAZ1AQ9NRL2 1556 aaPredicted RBP30.28■■■□□ 2.44
SDK1-207ENST00000478527 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
SDK1-207ENST00000478527 ATAD2BQ9ULI0 1458 aa30.18■■■□□ 2.42
SDK1-207ENST00000478527 NCAPD3P42695 1498 aa30.16■■■□□ 2.42
SDK1-207ENST00000478527 HMGXB3Q12766 1538 aa30.13■■■□□ 2.41
SDK1-207ENST00000478527 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
SDK1-207ENST00000478527 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
SDK1-207ENST00000478527 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
SDK1-207ENST00000478527 WIZO95785 1651 aa29.79■■■□□ 2.36
SDK1-207ENST00000478527 RSF1Q96T23 1441 aaPredicted RBP29.58■■■□□ 2.33
SDK1-207ENST00000478527 NESP48681 1621 aa29.55■■■□□ 2.32
SDK1-207ENST00000478527 LAMC3Q9Y6N6 1575 aa29.5■■■□□ 2.31
SDK1-207ENST00000478527 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
SDK1-207ENST00000478527 TOP2AP11388 1531 aaKnown RBP29.46■■■□□ 2.31
SDK1-207ENST00000478527 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
SDK1-207ENST00000478527 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
SDK1-207ENST00000478527 CUX2O14529 1486 aa29.29■■■□□ 2.28
SDK1-207ENST00000478527 CADPSQ9ULU8 1353 aa29.23■■■□□ 2.27
SDK1-207ENST00000478527 PDS5BQ9NTI5 1447 aa29.18■■■□□ 2.26
SDK1-207ENST00000478527 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
SDK1-207ENST00000478527 CFTRP13569 1480 aa29.08■■■□□ 2.25
SDK1-207ENST00000478527 CCDC88BA6NC98 1476 aa29■■■□□ 2.23
SDK1-207ENST00000478527 MRC2Q9UBG0 1479 aa28.99■■■□□ 2.23
SDK1-207ENST00000478527 CEP164Q9UPV0 1460 aa28.98■■■□□ 2.23
SDK1-207ENST00000478527 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
SDK1-207ENST00000478527 WDR62O43379 1518 aa28.96■■■□□ 2.23
SDK1-207ENST00000478527 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
SDK1-207ENST00000478527 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
SDK1-207ENST00000478527 DNMBPQ6XZF7 1577 aa28.51■■■□□ 2.15
SDK1-207ENST00000478527 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
SDK1-207ENST00000478527 DNAJC5Q9H3Z4 198 aa28.45■■■□□ 2.14
SDK1-207ENST00000478527 ABCC8Q09428 1581 aa28.43■■■□□ 2.14
SDK1-207ENST00000478527 IFT140Q96RY7 1462 aa28.36■■■□□ 2.13
SDK1-207ENST00000478527 TARBP1Q13395 1621 aaKnown RBP28.28■■■□□ 2.12
SDK1-207ENST00000478527 EIF4G3O43432 1585 aaKnown RBP28.27■■■□□ 2.12
SDK1-207ENST00000478527 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
SDK1-207ENST00000478527 POLA1P09884 1462 aaPredicted RBP28.26■■■□□ 2.11
SDK1-207ENST00000478527 CUX1P39880 1505 aa28.25■■■□□ 2.11
SDK1-207ENST00000478527 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
SDK1-207ENST00000478527 WDR97A6NE52 1622 aa28.11■■■□□ 2.09
SDK1-207ENST00000478527 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
SDK1-207ENST00000478527 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
SDK1-207ENST00000478527 SOGA1O94964 1423 aa28.01■■■□□ 2.08
SDK1-207ENST00000478527 AQRO60306 1485 aaKnown RBP eCLIP28■■■□□ 2.07
SDK1-207ENST00000478527 CHD1O14646 1710 aa27.98■■■□□ 2.07
SDK1-207ENST00000478527 TOP2BQ02880 1626 aa27.97■■■□□ 2.07
SDK1-207ENST00000478527 SYNJ1O43426 1573 aa27.97■■■□□ 2.07
SDK1-207ENST00000478527 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
SDK1-207ENST00000478527 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
SDK1-207ENST00000478527 ABCA5Q8WWZ7 1642 aa27.89■■■□□ 2.06
SDK1-207ENST00000478527 TDRD9Q8NDG6 1382 aaKnown RBP27.88■■■□□ 2.05
SDK1-207ENST00000478527 ABCA10Q8WWZ4 1543 aa27.87■■■□□ 2.05
SDK1-207ENST00000478527 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
SDK1-207ENST00000478527 OSCARQ8IYS5 282 aa27.82■■■□□ 2.04
SDK1-207ENST00000478527 GRIN2BQ13224 1484 aa27.8■■■□□ 2.04
SDK1-207ENST00000478527 MAGI1Q96QZ7 1491 aaPredicted RBP27.79■■■□□ 2.04
SDK1-207ENST00000478527 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.04
SDK1-207ENST00000478527 RIMBP3CA6NJZ7 1639 aa27.68■■■□□ 2.02
SDK1-207ENST00000478527 RIMBP3BA6NNM3 1639 aa27.68■■■□□ 2.02
SDK1-207ENST00000478527 RIMBP3Q9UFD9 1639 aa27.68■■■□□ 2.02
SDK1-207ENST00000478527 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
SDK1-207ENST00000478527 ADAMTS12P58397 1594 aa27.65■■■□□ 2.02
SDK1-207ENST00000478527 ARHGEF11O15085 1522 aa27.61■■■□□ 2.01
SDK1-207ENST00000478527 CLASP1Q7Z460 1538 aa27.61■■■□□ 2.01
SDK1-207ENST00000478527 FBLN2P98095 1184 aa27.58■■■□□ 2.01
SDK1-207ENST00000478527 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
SDK1-207ENST00000478527 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
SDK1-207ENST00000478527 GRIN2AQ12879 1464 aa27.48■■□□□ 1.99
SDK1-207ENST00000478527 TRIM41Q8WV44 630 aa27.43■■□□□ 1.98
SDK1-207ENST00000478527 FHAD1B1AJZ9 1412 aa27.42■■□□□ 1.98
SDK1-207ENST00000478527 CEP170Q5SW79 1584 aa27.41■■□□□ 1.98
SDK1-207ENST00000478527 ARAP1Q96P48 1450 aa27.38■■□□□ 1.97
SDK1-207ENST00000478527 NUP160Q12769 1436 aa27.36■■□□□ 1.97
SDK1-207ENST00000478527 CUL7Q14999 1698 aa27.33■■□□□ 1.97
SDK1-207ENST00000478527 KIF27Q86VH2 1401 aa27.32■■□□□ 1.96
SDK1-207ENST00000478527 SHROOM2Q13796 1616 aa27.27■■□□□ 1.96
SDK1-207ENST00000478527 RUSC2Q8N2Y8 1516 aa27.26■■□□□ 1.95
SDK1-207ENST00000478527 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
SDK1-207ENST00000478527 IGF1RP08069 1367 aa27.16■■□□□ 1.94
SDK1-207ENST00000478527 CYB5RLQ6IPT4 315 aa27.13■■□□□ 1.93
SDK1-207ENST00000478527 CARMIL1Q5VZK9 1371 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms