RNA–Protein interactions for RNA: ENST00000478480.1

ATP6V0A4-205, Transcript of ATPase H+ transporting V0 subunit a4, humanhuman

TSL 3

Gene ATP6V0A4, Length 963 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4-205ENST00000478480 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
ATP6V0A4-205ENST00000478480 AEBP2Q6ZN18 517 aaPredicted RBP23.82■■□□□ 1.4
ATP6V0A4-205ENST00000478480 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
ATP6V0A4-205ENST00000478480 ABCC9O60706 1549 aa22.31■■□□□ 1.16
ATP6V0A4-205ENST00000478480 CCDC180Q9P1Z9 1646 aa21.96■■□□□ 1.11
ATP6V0A4-205ENST00000478480 DCAF8L2P0C7V8 631 aa21.15■□□□□ 0.98
ATP6V0A4-205ENST00000478480 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
ATP6V0A4-205ENST00000478480 RB1CC1Q8TDY2 1594 aa21.09■□□□□ 0.97
ATP6V0A4-205ENST00000478480 NACADO15069 1562 aa20.92■□□□□ 0.94
ATP6V0A4-205ENST00000478480 PABPN1Q86U42 306 aaKnown RBP eCLIP20.9■□□□□ 0.94
ATP6V0A4-205ENST00000478480 MYO15BQ96JP2 1530 aa20.57■□□□□ 0.88
ATP6V0A4-205ENST00000478480 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
ATP6V0A4-205ENST00000478480 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
ATP6V0A4-205ENST00000478480 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
ATP6V0A4-205ENST00000478480 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
ATP6V0A4-205ENST00000478480 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
ATP6V0A4-205ENST00000478480 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
ATP6V0A4-205ENST00000478480 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
ATP6V0A4-205ENST00000478480 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
ATP6V0A4-205ENST00000478480 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
ATP6V0A4-205ENST00000478480 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
ATP6V0A4-205ENST00000478480 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
ATP6V0A4-205ENST00000478480 DNAJC5Q9H3Z4 198 aa19.44■□□□□ 0.7
ATP6V0A4-205ENST00000478480 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
ATP6V0A4-205ENST00000478480 ATAD2BQ9ULI0 1458 aa19.31■□□□□ 0.68
ATP6V0A4-205ENST00000478480 ERCC6Q03468 1493 aa19.3■□□□□ 0.68
ATP6V0A4-205ENST00000478480 CUX2O14529 1486 aa19.21■□□□□ 0.67
ATP6V0A4-205ENST00000478480 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
ATP6V0A4-205ENST00000478480 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
ATP6V0A4-205ENST00000478480 HMGXB3Q12766 1538 aa19.13■□□□□ 0.65
ATP6V0A4-205ENST00000478480 BAZ1BQ9UIG0 1483 aaKnown RBP19.12■□□□□ 0.65
ATP6V0A4-205ENST00000478480 NESP48681 1621 aa19.11■□□□□ 0.65
ATP6V0A4-205ENST00000478480 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
ATP6V0A4-205ENST00000478480 FOXD1Q16676 465 aa19■□□□□ 0.63
ATP6V0A4-205ENST00000478480 MROH2BQ7Z745 1585 aa18.99■□□□□ 0.63
ATP6V0A4-205ENST00000478480 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
ATP6V0A4-205ENST00000478480 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
ATP6V0A4-205ENST00000478480 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
ATP6V0A4-205ENST00000478480 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
ATP6V0A4-205ENST00000478480 THOC2Q8NI27 1593 aaKnown RBP18.79■□□□□ 0.6
ATP6V0A4-205ENST00000478480 WIZO95785 1651 aa18.69■□□□□ 0.58
ATP6V0A4-205ENST00000478480 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
ATP6V0A4-205ENST00000478480 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
ATP6V0A4-205ENST00000478480 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
ATP6V0A4-205ENST00000478480 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
ATP6V0A4-205ENST00000478480 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
ATP6V0A4-205ENST00000478480 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
ATP6V0A4-205ENST00000478480 WDR62O43379 1518 aa18.58■□□□□ 0.56
ATP6V0A4-205ENST00000478480 CFTRP13569 1480 aa18.54■□□□□ 0.56
ATP6V0A4-205ENST00000478480 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
ATP6V0A4-205ENST00000478480 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
ATP6V0A4-205ENST00000478480 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
ATP6V0A4-205ENST00000478480 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
ATP6V0A4-205ENST00000478480 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.52
ATP6V0A4-205ENST00000478480 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
ATP6V0A4-205ENST00000478480 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
ATP6V0A4-205ENST00000478480 TOPBP1Q92547 1522 aa18.19■□□□□ 0.5
ATP6V0A4-205ENST00000478480 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
ATP6V0A4-205ENST00000478480 FBLN2P98095 1184 aa18.15■□□□□ 0.5
ATP6V0A4-205ENST00000478480 AQRO60306 1485 aaKnown RBP eCLIP18.11■□□□□ 0.49
ATP6V0A4-205ENST00000478480 CYB5RLQ6IPT4 315 aa18.09■□□□□ 0.49
ATP6V0A4-205ENST00000478480 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
ATP6V0A4-205ENST00000478480 DNMBPQ6XZF7 1577 aa18.07■□□□□ 0.48
ATP6V0A4-205ENST00000478480 RIMBP3CA6NJZ7 1639 aa18.03■□□□□ 0.48
ATP6V0A4-205ENST00000478480 RIMBP3BA6NNM3 1639 aa18.03■□□□□ 0.48
ATP6V0A4-205ENST00000478480 RIMBP3Q9UFD9 1639 aa18.03■□□□□ 0.48
ATP6V0A4-205ENST00000478480 ARHGEF11O15085 1522 aa18.03■□□□□ 0.48
ATP6V0A4-205ENST00000478480 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
ATP6V0A4-205ENST00000478480 SOGA1O94964 1423 aa18.01■□□□□ 0.47
ATP6V0A4-205ENST00000478480 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
ATP6V0A4-205ENST00000478480 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
ATP6V0A4-205ENST00000478480 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
ATP6V0A4-205ENST00000478480 MSH5O43196 834 aa17.97■□□□□ 0.47
ATP6V0A4-205ENST00000478480 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
ATP6V0A4-205ENST00000478480 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
ATP6V0A4-205ENST00000478480 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
ATP6V0A4-205ENST00000478480 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
ATP6V0A4-205ENST00000478480 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.45
ATP6V0A4-205ENST00000478480 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
ATP6V0A4-205ENST00000478480 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
ATP6V0A4-205ENST00000478480 CHD1O14646 1710 aa17.84■□□□□ 0.45
ATP6V0A4-205ENST00000478480 CUX1P39880 1505 aa17.82■□□□□ 0.44
ATP6V0A4-205ENST00000478480 PIAS4Q8N2W9 510 aaPredicted RBP17.82■□□□□ 0.44
ATP6V0A4-205ENST00000478480 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
ATP6V0A4-205ENST00000478480 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
ATP6V0A4-205ENST00000478480 SYNJ2O15056 1496 aa17.75■□□□□ 0.43
ATP6V0A4-205ENST00000478480 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
ATP6V0A4-205ENST00000478480 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
ATP6V0A4-205ENST00000478480 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
ATP6V0A4-205ENST00000478480 CLASP1Q7Z460 1538 aa17.7■□□□□ 0.42
ATP6V0A4-205ENST00000478480 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
ATP6V0A4-205ENST00000478480 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
ATP6V0A4-205ENST00000478480 WRNQ14191 1432 aaPredicted RBP eCLIP17.66■□□□□ 0.42
ATP6V0A4-205ENST00000478480 ADRA2BP18089 450 aa17.66■□□□□ 0.42
ATP6V0A4-205ENST00000478480 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
ATP6V0A4-205ENST00000478480 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
ATP6V0A4-205ENST00000478480 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
ATP6V0A4-205ENST00000478480 FHAD1B1AJZ9 1412 aa17.53■□□□□ 0.4
ATP6V0A4-205ENST00000478480 NUP160Q12769 1436 aa17.5■□□□□ 0.39
ATP6V0A4-205ENST00000478480 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms