RNA–Protein interactions for RNA: ENST00000478447.1

RHOC-214, Transcript of ras homolog family member C, humanhuman

TSL 2

Gene RHOC, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOC-214ENST00000478447 NISCHQ9Y2I1 1504 aa30.81■■■□□ 2.52
RHOC-214ENST00000478447 ABCC9O60706 1549 aa29.58■■■□□ 2.33
RHOC-214ENST00000478447 DNAJC5BQ9UF47 199 aa28.83■■■□□ 2.21
RHOC-214ENST00000478447 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
RHOC-214ENST00000478447 RB1CC1Q8TDY2 1594 aa27.53■■■□□ 2
RHOC-214ENST00000478447 DNAJC5Q9H3Z4 198 aa27.39■■□□□ 1.98
RHOC-214ENST00000478447 PABPN1Q86U42 306 aaKnown RBP eCLIP27.34■■□□□ 1.97
RHOC-214ENST00000478447 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
RHOC-214ENST00000478447 NACADO15069 1562 aa26.97■■□□□ 1.91
RHOC-214ENST00000478447 DCAF8L2P0C7V8 631 aa26.8■■□□□ 1.88
RHOC-214ENST00000478447 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
RHOC-214ENST00000478447 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
RHOC-214ENST00000478447 CC2D2AQ9P2K1 1620 aa26.63■■□□□ 1.85
RHOC-214ENST00000478447 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.79
RHOC-214ENST00000478447 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
RHOC-214ENST00000478447 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
RHOC-214ENST00000478447 CUX2O14529 1486 aa25.91■■□□□ 1.74
RHOC-214ENST00000478447 TRIM41Q8WV44 630 aa25.84■■□□□ 1.73
RHOC-214ENST00000478447 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
RHOC-214ENST00000478447 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
RHOC-214ENST00000478447 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
RHOC-214ENST00000478447 ZCCHC6Q5VYS8 1495 aaKnown RBP25.22■■□□□ 1.63
RHOC-214ENST00000478447 NESP48681 1621 aa25.03■■□□□ 1.6
RHOC-214ENST00000478447 THOC2Q8NI27 1593 aaKnown RBP24.99■■□□□ 1.59
RHOC-214ENST00000478447 NCAPD3P42695 1498 aa24.86■■□□□ 1.57
RHOC-214ENST00000478447 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
RHOC-214ENST00000478447 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
RHOC-214ENST00000478447 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
RHOC-214ENST00000478447 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
RHOC-214ENST00000478447 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
RHOC-214ENST00000478447 HMGXB3Q12766 1538 aa24.6■■□□□ 1.53
RHOC-214ENST00000478447 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
RHOC-214ENST00000478447 OSCARQ8IYS5 282 aa24.58■■□□□ 1.53
RHOC-214ENST00000478447 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
RHOC-214ENST00000478447 RIMBP3CA6NJZ7 1639 aa24.46■■□□□ 1.51
RHOC-214ENST00000478447 RIMBP3BA6NNM3 1639 aa24.46■■□□□ 1.51
RHOC-214ENST00000478447 RIMBP3Q9UFD9 1639 aa24.46■■□□□ 1.51
RHOC-214ENST00000478447 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
RHOC-214ENST00000478447 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
RHOC-214ENST00000478447 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
RHOC-214ENST00000478447 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
RHOC-214ENST00000478447 WDR62O43379 1518 aa24.31■■□□□ 1.48
RHOC-214ENST00000478447 ARHGEF11O15085 1522 aa24.19■■□□□ 1.46
RHOC-214ENST00000478447 CYB5RLQ6IPT4 315 aa24.16■■□□□ 1.46
RHOC-214ENST00000478447 CADPSQ9ULU8 1353 aa24.08■■□□□ 1.45
RHOC-214ENST00000478447 CEP164Q9UPV0 1460 aa24.03■■□□□ 1.44
RHOC-214ENST00000478447 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
RHOC-214ENST00000478447 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
RHOC-214ENST00000478447 ARAP1Q96P48 1450 aa23.85■■□□□ 1.41
RHOC-214ENST00000478447 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
RHOC-214ENST00000478447 URB2Q14146 1524 aaKnown RBP23.75■■□□□ 1.39
RHOC-214ENST00000478447 ILDR1Q86SU0 546 aaPredicted RBP23.73■■□□□ 1.39
RHOC-214ENST00000478447 CHD1O14646 1710 aa23.7■■□□□ 1.38
RHOC-214ENST00000478447 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
RHOC-214ENST00000478447 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
RHOC-214ENST00000478447 FBLN2P98095 1184 aa23.55■■□□□ 1.36
RHOC-214ENST00000478447 RSF1Q96T23 1441 aaPredicted RBP23.55■■□□□ 1.36
RHOC-214ENST00000478447 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
RHOC-214ENST00000478447 CFTRP13569 1480 aa23.51■■□□□ 1.35
RHOC-214ENST00000478447 WIZO95785 1651 aa23.5■■□□□ 1.35
RHOC-214ENST00000478447 PRDM2Q13029 1718 aa23.37■■□□□ 1.33
RHOC-214ENST00000478447 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.324e-7■■■■■ 41.1
RHOC-214ENST00000478447 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
RHOC-214ENST00000478447 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
RHOC-214ENST00000478447 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
RHOC-214ENST00000478447 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
RHOC-214ENST00000478447 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
RHOC-214ENST00000478447 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
RHOC-214ENST00000478447 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
RHOC-214ENST00000478447 DNMBPQ6XZF7 1577 aa23.08■■□□□ 1.29
RHOC-214ENST00000478447 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
RHOC-214ENST00000478447 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
RHOC-214ENST00000478447 KDM4FA0A1W2PPD8 638 aa23.04■■□□□ 1.28
RHOC-214ENST00000478447 TOP2AP11388 1531 aaKnown RBP23.02■■□□□ 1.28
RHOC-214ENST00000478447 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
RHOC-214ENST00000478447 POLA1P09884 1462 aaPredicted RBP22.93■■□□□ 1.26
RHOC-214ENST00000478447 RAD54L2Q9Y4B4 1467 aa22.93■■□□□ 1.26
RHOC-214ENST00000478447 MAGI1Q96QZ7 1491 aaPredicted RBP22.88■■□□□ 1.25
RHOC-214ENST00000478447 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
RHOC-214ENST00000478447 SOGA1O94964 1423 aa22.84■■□□□ 1.25
RHOC-214ENST00000478447 SYNJ2O15056 1496 aa22.84■■□□□ 1.25
RHOC-214ENST00000478447 KDM6BO15054 1643 aa22.78■■□□□ 1.24
RHOC-214ENST00000478447 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
RHOC-214ENST00000478447 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
RHOC-214ENST00000478447 GRIN2BQ13224 1484 aa22.76■■□□□ 1.23
RHOC-214ENST00000478447 FAM69CQ0P6D2 419 aa22.74■■□□□ 1.23
RHOC-214ENST00000478447 HECW2Q9P2P5 1572 aa22.73■■□□□ 1.23
RHOC-214ENST00000478447 PBRM1Q86U86 1689 aa22.71■■□□□ 1.23
RHOC-214ENST00000478447 TSPOAP1O95153 1857 aa22.71■■□□□ 1.23
RHOC-214ENST00000478447 FBXO41Q8TF61 875 aa22.67■■□□□ 1.22
RHOC-214ENST00000478447 CEP170Q5SW79 1584 aa22.65■■□□□ 1.22
RHOC-214ENST00000478447 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
RHOC-214ENST00000478447 ABCC10Q5T3U5 1492 aa22.6■■□□□ 1.21
RHOC-214ENST00000478447 ADGRL1O94910 1474 aa22.6■■□□□ 1.21
RHOC-214ENST00000478447 DIP2BQ9P265 1576 aa22.56■■□□□ 1.2
RHOC-214ENST00000478447 NPM1P06748 294 aaKnown RBP eCLIP22.54■■□□□ 1.2
RHOC-214ENST00000478447 LMTK3Q96Q04 1460 aa22.54■■□□□ 1.2
RHOC-214ENST00000478447 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
RHOC-214ENST00000478447 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
RHOC-214ENST00000478447 MAPKBP1O60336 1514 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms