RNA–Protein interactions for RNA: ENST00000478415.1

BRWD3-203, Transcript of bromodomain and WD repeat domain containing 3, humanhuman

TSL 5

Gene BRWD3, Length 1,350 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3-203ENST00000478415 NISCHQ9Y2I1 1504 aa40.68■■■■■ 4.1
BRWD3-203ENST00000478415 CCDC180Q9P1Z9 1646 aa36.22■■■■□ 3.39
BRWD3-203ENST00000478415 ABCC9O60706 1549 aa35.25■■■■□ 3.23
BRWD3-203ENST00000478415 RB1CC1Q8TDY2 1594 aa34.04■■■■□ 3.04
BRWD3-203ENST00000478415 NACADO15069 1562 aa34.03■■■■□ 3.04
BRWD3-203ENST00000478415 ZCCHC6Q5VYS8 1495 aaKnown RBP33.9■■■■□ 3.02
BRWD3-203ENST00000478415 MYO15BQ96JP2 1530 aa33.89■■■■□ 3.02
BRWD3-203ENST00000478415 DCAF8L2P0C7V8 631 aa33.85■■■■□ 3.01
BRWD3-203ENST00000478415 DCAF1Q9Y4B6 1507 aa33.74■■■□□ 2.99
BRWD3-203ENST00000478415 UNC13AQ9UPW8 1703 aa33.21■■■□□ 2.91
BRWD3-203ENST00000478415 BICRAQ9NZM4 1560 aa32.95■■■□□ 2.86
BRWD3-203ENST00000478415 SCRIBQ14160 1630 aa32.93■■■□□ 2.86
BRWD3-203ENST00000478415 PABPN1Q86U42 306 aaKnown RBP eCLIP32.91■■■□□ 2.86
BRWD3-203ENST00000478415 SHROOM4Q9ULL8 1493 aa32.76■■■□□ 2.83
BRWD3-203ENST00000478415 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
BRWD3-203ENST00000478415 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
BRWD3-203ENST00000478415 CC2D2AQ9P2K1 1620 aa31.94■■■□□ 2.7
BRWD3-203ENST00000478415 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
BRWD3-203ENST00000478415 SMARCA4P51532 1647 aa31.56■■■□□ 2.64
BRWD3-203ENST00000478415 BAZ1AQ9NRL2 1556 aaPredicted RBP31.56■■■□□ 2.64
BRWD3-203ENST00000478415 SMARCA2P51531 1590 aa31.38■■■□□ 2.61
BRWD3-203ENST00000478415 NCAPD3P42695 1498 aa31.37■■■□□ 2.61
BRWD3-203ENST00000478415 ATAD2BQ9ULI0 1458 aa31.36■■■□□ 2.61
BRWD3-203ENST00000478415 MROH2BQ7Z745 1585 aa31.3■■■□□ 2.6
BRWD3-203ENST00000478415 PEG3Q9GZU2 1588 aa31.29■■■□□ 2.6
BRWD3-203ENST00000478415 HMGXB3Q12766 1538 aa31.25■■■□□ 2.59
BRWD3-203ENST00000478415 BAZ1BQ9UIG0 1483 aaKnown RBP31.12■■■□□ 2.57
BRWD3-203ENST00000478415 RSF1Q96T23 1441 aaPredicted RBP30.97■■■□□ 2.55
BRWD3-203ENST00000478415 WIZO95785 1651 aa30.97■■■□□ 2.55
BRWD3-203ENST00000478415 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
BRWD3-203ENST00000478415 LAMC3Q9Y6N6 1575 aa30.56■■■□□ 2.48
BRWD3-203ENST00000478415 NESP48681 1621 aa30.5■■■□□ 2.47
BRWD3-203ENST00000478415 CADPSQ9ULU8 1353 aa30.45■■■□□ 2.46
BRWD3-203ENST00000478415 ERCC6Q03468 1493 aa30.43■■■□□ 2.46
BRWD3-203ENST00000478415 PDS5BQ9NTI5 1447 aa30.34■■■□□ 2.45
BRWD3-203ENST00000478415 CCDC88BA6NC98 1476 aa30.3■■■□□ 2.44
BRWD3-203ENST00000478415 CFTRP13569 1480 aa30.27■■■□□ 2.44
BRWD3-203ENST00000478415 KIF21AQ7Z4S6 1674 aa30.19■■■□□ 2.42
BRWD3-203ENST00000478415 CUX2O14529 1486 aa30.16■■■□□ 2.42
BRWD3-203ENST00000478415 SUPT5HO00267 1087 aaKnown RBP30.15■■■□□ 2.42
BRWD3-203ENST00000478415 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
BRWD3-203ENST00000478415 PRDM2Q13029 1718 aa30.09■■■□□ 2.41
BRWD3-203ENST00000478415 FANCD2Q9BXW9 1451 aa30.07■■■□□ 2.4
BRWD3-203ENST00000478415 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
BRWD3-203ENST00000478415 MRC2Q9UBG0 1479 aa30■■■□□ 2.39
BRWD3-203ENST00000478415 WDR62O43379 1518 aa29.91■■■□□ 2.38
BRWD3-203ENST00000478415 URB2Q14146 1524 aaKnown RBP29.75■■■□□ 2.35
BRWD3-203ENST00000478415 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
BRWD3-203ENST00000478415 DNMBPQ6XZF7 1577 aa29.61■■■□□ 2.33
BRWD3-203ENST00000478415 TOPBP1Q92547 1522 aa29.6■■■□□ 2.33
BRWD3-203ENST00000478415 IFT140Q96RY7 1462 aa29.44■■■□□ 2.3
BRWD3-203ENST00000478415 CUX1P39880 1505 aa29.37■■■□□ 2.29
BRWD3-203ENST00000478415 POLA1P09884 1462 aaPredicted RBP29.35■■■□□ 2.29
BRWD3-203ENST00000478415 TARBP1Q13395 1621 aaKnown RBP29.28■■■□□ 2.28
BRWD3-203ENST00000478415 FGD5Q6ZNL6 1462 aa29.28■■■□□ 2.28
BRWD3-203ENST00000478415 SOGA1O94964 1423 aa29.24■■■□□ 2.27
BRWD3-203ENST00000478415 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
BRWD3-203ENST00000478415 ZNF608Q9ULD9 1512 aaPredicted RBP29.21■■■□□ 2.27
BRWD3-203ENST00000478415 BIVM-ERCC5R4GMW8 1640 aa29.19■■■□□ 2.26
BRWD3-203ENST00000478415 TOP2BQ02880 1626 aa29.18■■■□□ 2.26
BRWD3-203ENST00000478415 RAD54L2Q9Y4B4 1467 aa29.17■■■□□ 2.26
BRWD3-203ENST00000478415 WDR97A6NE52 1622 aa29.17■■■□□ 2.26
BRWD3-203ENST00000478415 EIF4G3O43432 1585 aaKnown RBP29.16■■■□□ 2.26
BRWD3-203ENST00000478415 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
BRWD3-203ENST00000478415 DNAJC5Q9H3Z4 198 aa29.11■■■□□ 2.25
BRWD3-203ENST00000478415 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.247e-7■■■■■ 32.2
BRWD3-203ENST00000478415 ABCA10Q8WWZ4 1543 aa29.04■■■□□ 2.24
BRWD3-203ENST00000478415 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.23
BRWD3-203ENST00000478415 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
BRWD3-203ENST00000478415 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
BRWD3-203ENST00000478415 GAPVD1Q14C86 1478 aa28.9■■■□□ 2.22
BRWD3-203ENST00000478415 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
BRWD3-203ENST00000478415 MAGI1Q96QZ7 1491 aaPredicted RBP28.86■■■□□ 2.21
BRWD3-203ENST00000478415 PBRM1Q86U86 1689 aa28.85■■■□□ 2.21
BRWD3-203ENST00000478415 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
BRWD3-203ENST00000478415 CHD1O14646 1710 aa28.77■■■□□ 2.2
BRWD3-203ENST00000478415 SYNJ2O15056 1496 aa28.72■■■□□ 2.19
BRWD3-203ENST00000478415 ERICH3Q5RHP9 1530 aa28.72■■■□□ 2.19
BRWD3-203ENST00000478415 FBLN2P98095 1184 aa28.69■■■□□ 2.18
BRWD3-203ENST00000478415 CHMP7Q8WUX9 453 aaPredicted RBP28.67■■■□□ 2.18
BRWD3-203ENST00000478415 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
BRWD3-203ENST00000478415 ADAMTS12P58397 1594 aa28.62■■■□□ 2.17
BRWD3-203ENST00000478415 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
BRWD3-203ENST00000478415 TRIM41Q8WV44 630 aa28.54■■■□□ 2.16
BRWD3-203ENST00000478415 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
BRWD3-203ENST00000478415 CLASP1Q7Z460 1538 aa28.49■■■□□ 2.15
BRWD3-203ENST00000478415 CUL7Q14999 1698 aa28.47■■■□□ 2.15
BRWD3-203ENST00000478415 IGF1RP08069 1367 aa28.47■■■□□ 2.15
BRWD3-203ENST00000478415 NUP160Q12769 1436 aa28.41■■■□□ 2.14
BRWD3-203ENST00000478415 ARHGEF11O15085 1522 aa28.39■■■□□ 2.14
BRWD3-203ENST00000478415 RIMBP3CA6NJZ7 1639 aa28.38■■■□□ 2.13
BRWD3-203ENST00000478415 RIMBP3BA6NNM3 1639 aa28.38■■■□□ 2.13
BRWD3-203ENST00000478415 RIMBP3Q9UFD9 1639 aa28.38■■■□□ 2.13
BRWD3-203ENST00000478415 CEP170Q5SW79 1584 aa28.36■■■□□ 2.13
BRWD3-203ENST00000478415 CARMIL1Q5VZK9 1371 aa28.32■■■□□ 2.12
BRWD3-203ENST00000478415 RUSC2Q8N2Y8 1516 aa28.28■■■□□ 2.12
BRWD3-203ENST00000478415 SHROOM2Q13796 1616 aa28.2■■■□□ 2.1
BRWD3-203ENST00000478415 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
BRWD3-203ENST00000478415 EEA1Q15075 1411 aa28.18■■■□□ 2.1
BRWD3-203ENST00000478415 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms