RNA–Protein interactions for RNA: ENST00000478375.5

TFAP2A-212, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,349 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-212ENST00000478375 NISCHQ9Y2I1 1504 aa40.04■■■■■ 4
TFAP2A-212ENST00000478375 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
TFAP2A-212ENST00000478375 ABCC9O60706 1549 aa35.16■■■■□ 3.22
TFAP2A-212ENST00000478375 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
TFAP2A-212ENST00000478375 DCAF8L2P0C7V8 631 aa33.63■■■□□ 2.97
TFAP2A-212ENST00000478375 NACADO15069 1562 aa33.55■■■□□ 2.96
TFAP2A-212ENST00000478375 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
TFAP2A-212ENST00000478375 MYO15BQ96JP2 1530 aa33.19■■■□□ 2.9
TFAP2A-212ENST00000478375 UNC13AQ9UPW8 1703 aa33.04■■■□□ 2.88
TFAP2A-212ENST00000478375 DCAF1Q9Y4B6 1507 aa33.03■■■□□ 2.88
TFAP2A-212ENST00000478375 PABPN1Q86U42 306 aaKnown RBP eCLIP32.78■■■□□ 2.84
TFAP2A-212ENST00000478375 SCRIBQ14160 1630 aa32.69■■■□□ 2.82
TFAP2A-212ENST00000478375 BICRAQ9NZM4 1560 aa32.67■■■□□ 2.82
TFAP2A-212ENST00000478375 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
TFAP2A-212ENST00000478375 SHROOM4Q9ULL8 1493 aa32.19■■■□□ 2.74
TFAP2A-212ENST00000478375 EIF4G1Q04637 1599 aaKnown RBP31.84■■■□□ 2.69
TFAP2A-212ENST00000478375 CC2D2AQ9P2K1 1620 aa31.78■■■□□ 2.68
TFAP2A-212ENST00000478375 CECR2Q9BXF3 1484 aa31.55■■■□□ 2.64
TFAP2A-212ENST00000478375 SMARCA4P51532 1647 aa31.17■■■□□ 2.58
TFAP2A-212ENST00000478375 BAZ1AQ9NRL2 1556 aaPredicted RBP31.07■■■□□ 2.56
TFAP2A-212ENST00000478375 ATAD2BQ9ULI0 1458 aa30.97■■■□□ 2.55
TFAP2A-212ENST00000478375 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
TFAP2A-212ENST00000478375 MROH2BQ7Z745 1585 aa30.91■■■□□ 2.54
TFAP2A-212ENST00000478375 NCAPD3P42695 1498 aa30.91■■■□□ 2.54
TFAP2A-212ENST00000478375 HMGXB3Q12766 1538 aa30.82■■■□□ 2.52
TFAP2A-212ENST00000478375 BAZ1BQ9UIG0 1483 aaKnown RBP30.77■■■□□ 2.52
TFAP2A-212ENST00000478375 PEG3Q9GZU2 1588 aa30.76■■■□□ 2.52
TFAP2A-212ENST00000478375 WIZO95785 1651 aa30.63■■■□□ 2.49
TFAP2A-212ENST00000478375 RSF1Q96T23 1441 aaPredicted RBP30.44■■■□□ 2.46
TFAP2A-212ENST00000478375 NESP48681 1621 aa30.37■■■□□ 2.45
TFAP2A-212ENST00000478375 ERCC6Q03468 1493 aa30.32■■■□□ 2.44
TFAP2A-212ENST00000478375 TOP2AP11388 1531 aaKnown RBP30.23■■■□□ 2.43
TFAP2A-212ENST00000478375 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.43
TFAP2A-212ENST00000478375 KIF21AQ7Z4S6 1674 aa30.08■■■□□ 2.41
TFAP2A-212ENST00000478375 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
TFAP2A-212ENST00000478375 PDS5BQ9NTI5 1447 aa29.97■■■□□ 2.39
TFAP2A-212ENST00000478375 CUX2O14529 1486 aa29.94■■■□□ 2.38
TFAP2A-212ENST00000478375 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
TFAP2A-212ENST00000478375 CCDC88BA6NC98 1476 aa29.84■■■□□ 2.37
TFAP2A-212ENST00000478375 CFTRP13569 1480 aa29.83■■■□□ 2.37
TFAP2A-212ENST00000478375 PRDM2Q13029 1718 aa29.77■■■□□ 2.36
TFAP2A-212ENST00000478375 FANCD2Q9BXW9 1451 aa29.76■■■□□ 2.35
TFAP2A-212ENST00000478375 CEP164Q9UPV0 1460 aa29.76■■■□□ 2.35
TFAP2A-212ENST00000478375 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
TFAP2A-212ENST00000478375 SUPT5HO00267 1087 aaKnown RBP29.67■■■□□ 2.34
TFAP2A-212ENST00000478375 WDR62O43379 1518 aa29.63■■■□□ 2.33
TFAP2A-212ENST00000478375 URB2Q14146 1524 aaKnown RBP29.49■■■□□ 2.31
TFAP2A-212ENST00000478375 TOPBP1Q92547 1522 aa29.28■■■□□ 2.28
TFAP2A-212ENST00000478375 DNMBPQ6XZF7 1577 aa29.24■■■□□ 2.27
TFAP2A-212ENST00000478375 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
TFAP2A-212ENST00000478375 DNAJC5Q9H3Z4 198 aa29.15■■■□□ 2.26
TFAP2A-212ENST00000478375 IFT140Q96RY7 1462 aa29.08■■■□□ 2.25
TFAP2A-212ENST00000478375 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
TFAP2A-212ENST00000478375 CUX1P39880 1505 aa29.02■■■□□ 2.24
TFAP2A-212ENST00000478375 POLA1P09884 1462 aaPredicted RBP29■■■□□ 2.23
TFAP2A-212ENST00000478375 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
TFAP2A-212ENST00000478375 TARBP1Q13395 1621 aaKnown RBP28.96■■■□□ 2.23
TFAP2A-212ENST00000478375 FGD5Q6ZNL6 1462 aa28.95■■■□□ 2.22
TFAP2A-212ENST00000478375 RAD54L2Q9Y4B4 1467 aa28.92■■■□□ 2.22
TFAP2A-212ENST00000478375 SOGA1O94964 1423 aa28.85■■■□□ 2.21
TFAP2A-212ENST00000478375 AQRO60306 1485 aaKnown RBP eCLIP28.83■■■□□ 2.21
TFAP2A-212ENST00000478375 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
TFAP2A-212ENST00000478375 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
TFAP2A-212ENST00000478375 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
TFAP2A-212ENST00000478375 WRNQ14191 1432 aaPredicted RBP eCLIP28.74■■■□□ 2.19
TFAP2A-212ENST00000478375 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
TFAP2A-212ENST00000478375 TOP2BQ02880 1626 aa28.71■■■□□ 2.19
TFAP2A-212ENST00000478375 CHD1O14646 1710 aa28.68■■■□□ 2.18
TFAP2A-212ENST00000478375 OSCARQ8IYS5 282 aa28.65■■■□□ 2.18
TFAP2A-212ENST00000478375 PBRM1Q86U86 1689 aa28.62■■■□□ 2.17
TFAP2A-212ENST00000478375 SNAPC4Q5SXM2 1469 aa28.6■■■□□ 2.17
TFAP2A-212ENST00000478375 ABCA10Q8WWZ4 1543 aa28.59■■■□□ 2.17
TFAP2A-212ENST00000478375 FBLN2P98095 1184 aa28.57■■■□□ 2.16
TFAP2A-212ENST00000478375 ABCA5Q8WWZ7 1642 aa28.56■■■□□ 2.16
TFAP2A-212ENST00000478375 GRIN2BQ13224 1484 aa28.55■■■□□ 2.16
TFAP2A-212ENST00000478375 GAPVD1Q14C86 1478 aa28.55■■■□□ 2.16
TFAP2A-212ENST00000478375 MAGI1Q96QZ7 1491 aaPredicted RBP28.48■■■□□ 2.15
TFAP2A-212ENST00000478375 CHMP7Q8WUX9 453 aaPredicted RBP28.39■■■□□ 2.13
TFAP2A-212ENST00000478375 SYNJ2O15056 1496 aa28.38■■■□□ 2.13
TFAP2A-212ENST00000478375 RIMBP3CA6NJZ7 1639 aa28.34■■■□□ 2.13
TFAP2A-212ENST00000478375 RIMBP3BA6NNM3 1639 aa28.34■■■□□ 2.13
TFAP2A-212ENST00000478375 RIMBP3Q9UFD9 1639 aa28.34■■■□□ 2.13
TFAP2A-212ENST00000478375 ADAMTS12P58397 1594 aa28.32■■■□□ 2.12
TFAP2A-212ENST00000478375 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
TFAP2A-212ENST00000478375 ARHGEF11O15085 1522 aa28.29■■■□□ 2.12
TFAP2A-212ENST00000478375 ERICH3Q5RHP9 1530 aa28.25■■■□□ 2.11
TFAP2A-212ENST00000478375 CLASP1Q7Z460 1538 aa28.24■■■□□ 2.11
TFAP2A-212ENST00000478375 GRIN2AQ12879 1464 aa28.2■■■□□ 2.1
TFAP2A-212ENST00000478375 FHAD1B1AJZ9 1412 aa28.17■■■□□ 2.1
TFAP2A-212ENST00000478375 KIF27Q86VH2 1401 aa28.13■■■□□ 2.09
TFAP2A-212ENST00000478375 CEP170Q5SW79 1584 aa28.11■■■□□ 2.09
TFAP2A-212ENST00000478375 ARAP1Q96P48 1450 aa28.05■■■□□ 2.08
TFAP2A-212ENST00000478375 CUL7Q14999 1698 aa28.04■■■□□ 2.08
TFAP2A-212ENST00000478375 NUP160Q12769 1436 aa28.03■■■□□ 2.08
TFAP2A-212ENST00000478375 CYB5RLQ6IPT4 315 aa28■■■□□ 2.07
TFAP2A-212ENST00000478375 IGF1RP08069 1367 aa27.98■■■□□ 2.07
TFAP2A-212ENST00000478375 RUSC2Q8N2Y8 1516 aa27.92■■■□□ 2.06
TFAP2A-212ENST00000478375 ERCC6L2Q5T890 1561 aa27.91■■■□□ 2.06
TFAP2A-212ENST00000478375 SHROOM2Q13796 1616 aa27.89■■■□□ 2.06
TFAP2A-212ENST00000478375 CARMIL1Q5VZK9 1371 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms