RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
APTX-222ENST00000478279 ABCC9O60706 1549 aa24.84■■□□□ 1.57
APTX-222ENST00000478279 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
APTX-222ENST00000478279 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
APTX-222ENST00000478279 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
APTX-222ENST00000478279 NACADO15069 1562 aa23.23■■□□□ 1.31
APTX-222ENST00000478279 PABPN1Q86U42 306 aaKnown RBP eCLIP23.09■■□□□ 1.29
APTX-222ENST00000478279 DCAF8L2P0C7V8 631 aa23.04■■□□□ 1.28
APTX-222ENST00000478279 UNC13AQ9UPW8 1703 aa22.91■■□□□ 1.26
APTX-222ENST00000478279 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
APTX-222ENST00000478279 MYO15BQ96JP2 1530 aa22.79■■□□□ 1.24
APTX-222ENST00000478279 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
APTX-222ENST00000478279 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
APTX-222ENST00000478279 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
APTX-222ENST00000478279 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
APTX-222ENST00000478279 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
APTX-222ENST00000478279 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
APTX-222ENST00000478279 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
APTX-222ENST00000478279 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
APTX-222ENST00000478279 CUX2O14529 1486 aa21.58■■□□□ 1.05
APTX-222ENST00000478279 ERCC6Q03468 1493 aa21.48■■□□□ 1.03
APTX-222ENST00000478279 NCAPD3P42695 1498 aa21.46■■□□□ 1.03
APTX-222ENST00000478279 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
APTX-222ENST00000478279 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
APTX-222ENST00000478279 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
APTX-222ENST00000478279 NESP48681 1621 aa21.22■□□□□ 0.99
APTX-222ENST00000478279 SMARCA4P51532 1647 aa21.19■□□□□ 0.98
APTX-222ENST00000478279 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
APTX-222ENST00000478279 THOC2Q8NI27 1593 aaKnown RBP21.07■□□□□ 0.96
APTX-222ENST00000478279 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
APTX-222ENST00000478279 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
APTX-222ENST00000478279 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
APTX-222ENST00000478279 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
APTX-222ENST00000478279 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
APTX-222ENST00000478279 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
APTX-222ENST00000478279 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
APTX-222ENST00000478279 CADPSQ9ULU8 1353 aa20.8■□□□□ 0.92
APTX-222ENST00000478279 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
APTX-222ENST00000478279 WDR62O43379 1518 aa20.71■□□□□ 0.91
APTX-222ENST00000478279 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
APTX-222ENST00000478279 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
APTX-222ENST00000478279 WIZO95785 1651 aa20.57■□□□□ 0.88
APTX-222ENST00000478279 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
APTX-222ENST00000478279 CFTRP13569 1480 aa20.47■□□□□ 0.87
APTX-222ENST00000478279 URB2Q14146 1524 aaKnown RBP20.39■□□□□ 0.85
APTX-222ENST00000478279 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
APTX-222ENST00000478279 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
APTX-222ENST00000478279 RIMBP3CA6NJZ7 1639 aa20.29■□□□□ 0.84
APTX-222ENST00000478279 RIMBP3BA6NNM3 1639 aa20.29■□□□□ 0.84
APTX-222ENST00000478279 RIMBP3Q9UFD9 1639 aa20.29■□□□□ 0.84
APTX-222ENST00000478279 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
APTX-222ENST00000478279 ZNF608Q9ULD9 1512 aaPredicted RBP20.2■□□□□ 0.82
APTX-222ENST00000478279 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
APTX-222ENST00000478279 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
APTX-222ENST00000478279 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
APTX-222ENST00000478279 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
APTX-222ENST00000478279 CCDC88BA6NC98 1476 aa20.08■□□□□ 0.81
APTX-222ENST00000478279 ABCC8Q09428 1581 aa20.06■□□□□ 0.8
APTX-222ENST00000478279 EIF4G3O43432 1585 aaKnown RBP20.05■□□□□ 0.8
APTX-222ENST00000478279 TRHP20396 242 aaPredicted RBP20■□□□□ 0.79
APTX-222ENST00000478279 DNMBPQ6XZF7 1577 aa19.99■□□□□ 0.79
APTX-222ENST00000478279 AQRO60306 1485 aaKnown RBP eCLIP19.98■□□□□ 0.79
APTX-222ENST00000478279 CHD1O14646 1710 aa19.97■□□□□ 0.79
APTX-222ENST00000478279 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
APTX-222ENST00000478279 TARBP1Q13395 1621 aaKnown RBP19.95■□□□□ 0.78
APTX-222ENST00000478279 FBLN2P98095 1184 aa19.94■□□□□ 0.78
APTX-222ENST00000478279 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
APTX-222ENST00000478279 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
APTX-222ENST00000478279 TDRD9Q8NDG6 1382 aaKnown RBP19.81■□□□□ 0.76
APTX-222ENST00000478279 SOGA1O94964 1423 aa19.79■□□□□ 0.76
APTX-222ENST00000478279 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
APTX-222ENST00000478279 SNAPC4Q5SXM2 1469 aa19.75■□□□□ 0.75
APTX-222ENST00000478279 CHMP7Q8WUX9 453 aaPredicted RBP19.75■□□□□ 0.75
APTX-222ENST00000478279 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
APTX-222ENST00000478279 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
APTX-222ENST00000478279 AEBP2Q6ZN18 517 aaPredicted RBP19.71■□□□□ 0.75
APTX-222ENST00000478279 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
APTX-222ENST00000478279 FGD5Q6ZNL6 1462 aa19.69■□□□□ 0.74
APTX-222ENST00000478279 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
APTX-222ENST00000478279 SYNJ2O15056 1496 aa19.64■□□□□ 0.73
APTX-222ENST00000478279 CUX1P39880 1505 aa19.61■□□□□ 0.73
APTX-222ENST00000478279 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
APTX-222ENST00000478279 PBRM1Q86U86 1689 aa19.52■□□□□ 0.71
APTX-222ENST00000478279 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
APTX-222ENST00000478279 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
APTX-222ENST00000478279 ERCC6L2Q5T890 1561 aa19.41■□□□□ 0.7
APTX-222ENST00000478279 GRIN2AQ12879 1464 aa19.4■□□□□ 0.7
APTX-222ENST00000478279 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
APTX-222ENST00000478279 NUP160Q12769 1436 aa19.35■□□□□ 0.69
APTX-222ENST00000478279 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
APTX-222ENST00000478279 WRNQ14191 1432 aaPredicted RBP eCLIP19.31■□□□□ 0.68
APTX-222ENST00000478279 SHROOM2Q13796 1616 aa19.29■□□□□ 0.68
APTX-222ENST00000478279 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
APTX-222ENST00000478279 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
APTX-222ENST00000478279 PRG4Q92954 1404 aaPredicted RBP19.2■□□□□ 0.66
APTX-222ENST00000478279 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
APTX-222ENST00000478279 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
APTX-222ENST00000478279 JPH4Q96JJ6 628 aa19.19■□□□□ 0.66
APTX-222ENST00000478279 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
APTX-222ENST00000478279 FAM69CQ0P6D2 419 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms