RNA–Protein interactions for RNA: ENST00000478274.6

SCP2-209, Transcript of sterol carrier protein 2, humanhuman

TSL 2

Gene SCP2, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-209ENST00000478274 NISCHQ9Y2I1 1504 aa25.67■■□□□ 1.7
SCP2-209ENST00000478274 ABCC9O60706 1549 aa22.79■■□□□ 1.24
SCP2-209ENST00000478274 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
SCP2-209ENST00000478274 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
SCP2-209ENST00000478274 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
SCP2-209ENST00000478274 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
SCP2-209ENST00000478274 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
SCP2-209ENST00000478274 NACADO15069 1562 aa21.37■■□□□ 1.01
SCP2-209ENST00000478274 PABPN1Q86U42 306 aaKnown RBP eCLIP21.23■□□□□ 0.99
SCP2-209ENST00000478274 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
SCP2-209ENST00000478274 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
SCP2-209ENST00000478274 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
SCP2-209ENST00000478274 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
SCP2-209ENST00000478274 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
SCP2-209ENST00000478274 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
SCP2-209ENST00000478274 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
SCP2-209ENST00000478274 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
SCP2-209ENST00000478274 EIF4G1Q04637 1599 aaKnown RBP20.45■□□□□ 0.86
SCP2-209ENST00000478274 AEBP2Q6ZN18 517 aaPredicted RBP20.13■□□□□ 0.81
SCP2-209ENST00000478274 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
SCP2-209ENST00000478274 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
SCP2-209ENST00000478274 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
SCP2-209ENST00000478274 MROH2BQ7Z745 1585 aa19.81■□□□□ 0.76
SCP2-209ENST00000478274 SUPT5HO00267 1087 aaKnown RBP19.79■□□□□ 0.76
SCP2-209ENST00000478274 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
SCP2-209ENST00000478274 CUX2O14529 1486 aa19.74■□□□□ 0.75
SCP2-209ENST00000478274 RSF1Q96T23 1441 aaPredicted RBP19.72■□□□□ 0.75
SCP2-209ENST00000478274 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
SCP2-209ENST00000478274 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
SCP2-209ENST00000478274 WIZO95785 1651 aa19.65■□□□□ 0.74
SCP2-209ENST00000478274 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
SCP2-209ENST00000478274 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
SCP2-209ENST00000478274 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
SCP2-209ENST00000478274 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
SCP2-209ENST00000478274 NESP48681 1621 aa19.5■□□□□ 0.71
SCP2-209ENST00000478274 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
SCP2-209ENST00000478274 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
SCP2-209ENST00000478274 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
SCP2-209ENST00000478274 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
SCP2-209ENST00000478274 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
SCP2-209ENST00000478274 KIF21AQ7Z4S6 1674 aa19.19■□□□□ 0.66
SCP2-209ENST00000478274 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
SCP2-209ENST00000478274 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
SCP2-209ENST00000478274 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
SCP2-209ENST00000478274 MRC2Q9UBG0 1479 aa19.08■□□□□ 0.64
SCP2-209ENST00000478274 WDR62O43379 1518 aa19.02■□□□□ 0.64
SCP2-209ENST00000478274 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
SCP2-209ENST00000478274 CFTRP13569 1480 aa18.94■□□□□ 0.62
SCP2-209ENST00000478274 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
SCP2-209ENST00000478274 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
SCP2-209ENST00000478274 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
SCP2-209ENST00000478274 URB2Q14146 1524 aaKnown RBP18.76■□□□□ 0.59
SCP2-209ENST00000478274 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
SCP2-209ENST00000478274 WRNQ14191 1432 aaPredicted RBP eCLIP18.66■□□□□ 0.58
SCP2-209ENST00000478274 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
SCP2-209ENST00000478274 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
SCP2-209ENST00000478274 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.56
SCP2-209ENST00000478274 CUX1P39880 1505 aa18.57■□□□□ 0.56
SCP2-209ENST00000478274 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
SCP2-209ENST00000478274 TOPBP1Q92547 1522 aa18.56■□□□□ 0.56
SCP2-209ENST00000478274 RIMBP3CA6NJZ7 1639 aa18.56■□□□□ 0.56
SCP2-209ENST00000478274 RIMBP3BA6NNM3 1639 aa18.56■□□□□ 0.56
SCP2-209ENST00000478274 RIMBP3Q9UFD9 1639 aa18.56■□□□□ 0.56
SCP2-209ENST00000478274 TOP2BQ02880 1626 aa18.52■□□□□ 0.55
SCP2-209ENST00000478274 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
SCP2-209ENST00000478274 FGD5Q6ZNL6 1462 aa18.49■□□□□ 0.55
SCP2-209ENST00000478274 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
SCP2-209ENST00000478274 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
SCP2-209ENST00000478274 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
SCP2-209ENST00000478274 EIF4G3O43432 1585 aaKnown RBP18.42■□□□□ 0.54
SCP2-209ENST00000478274 SOGA1O94964 1423 aa18.4■□□□□ 0.54
SCP2-209ENST00000478274 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.54
SCP2-209ENST00000478274 RAD54L2Q9Y4B4 1467 aa18.38■□□□□ 0.53
SCP2-209ENST00000478274 FBLN2P98095 1184 aa18.37■□□□□ 0.53
SCP2-209ENST00000478274 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
SCP2-209ENST00000478274 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
SCP2-209ENST00000478274 FAM9AQ8IZU1 332 aaPredicted RBP18.32■□□□□ 0.52
SCP2-209ENST00000478274 CHD1O14646 1710 aa18.31■□□□□ 0.52
SCP2-209ENST00000478274 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
SCP2-209ENST00000478274 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
SCP2-209ENST00000478274 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
SCP2-209ENST00000478274 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
SCP2-209ENST00000478274 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
SCP2-209ENST00000478274 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
SCP2-209ENST00000478274 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
SCP2-209ENST00000478274 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
SCP2-209ENST00000478274 EEA1Q15075 1411 aa18.17■□□□□ 0.5
SCP2-209ENST00000478274 RUSC2Q8N2Y8 1516 aa18.17■□□□□ 0.5
SCP2-209ENST00000478274 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
SCP2-209ENST00000478274 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
SCP2-209ENST00000478274 PBRM1Q86U86 1689 aa18.14■□□□□ 0.49
SCP2-209ENST00000478274 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
SCP2-209ENST00000478274 MAGI1Q96QZ7 1491 aaPredicted RBP18.13■□□□□ 0.49
SCP2-209ENST00000478274 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
SCP2-209ENST00000478274 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
SCP2-209ENST00000478274 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
SCP2-209ENST00000478274 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
SCP2-209ENST00000478274 CUL7Q14999 1698 aa18.04■□□□□ 0.48
SCP2-209ENST00000478274 IGF1RP08069 1367 aa18.02■□□□□ 0.47
SCP2-209ENST00000478274 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms