RNA–Protein interactions for RNA: ENST00000478236.1

PLXNA3-203, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 460 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-203ENST00000478236 NISCHQ9Y2I1 1504 aa42.73■■■■■ 4.43
PLXNA3-203ENST00000478236 CCDC180Q9P1Z9 1646 aa38.23■■■■□ 3.71
PLXNA3-203ENST00000478236 ABCC9O60706 1549 aa38.19■■■■□ 3.7
PLXNA3-203ENST00000478236 RB1CC1Q8TDY2 1594 aa36.43■■■■□ 3.42
PLXNA3-203ENST00000478236 DCAF8L2P0C7V8 631 aa36.24■■■■□ 3.39
PLXNA3-203ENST00000478236 NACADO15069 1562 aa36.2■■■■□ 3.39
PLXNA3-203ENST00000478236 MYO15BQ96JP2 1530 aa35.73■■■■□ 3.31
PLXNA3-203ENST00000478236 DNAJC5BQ9UF47 199 aa35.69■■■■□ 3.3
PLXNA3-203ENST00000478236 PABPN1Q86U42 306 aaKnown RBP eCLIP35.65■■■■□ 3.3
PLXNA3-203ENST00000478236 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
PLXNA3-203ENST00000478236 UNC13AQ9UPW8 1703 aa35.4■■■■□ 3.26
PLXNA3-203ENST00000478236 DCAF1Q9Y4B6 1507 aa35.31■■■■□ 3.24
PLXNA3-203ENST00000478236 BICRAQ9NZM4 1560 aa35.22■■■■□ 3.23
PLXNA3-203ENST00000478236 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
PLXNA3-203ENST00000478236 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
PLXNA3-203ENST00000478236 CC2D2AQ9P2K1 1620 aa34.46■■■■□ 3.11
PLXNA3-203ENST00000478236 EIF4G1Q04637 1599 aaKnown RBP34.42■■■■□ 3.1
PLXNA3-203ENST00000478236 CECR2Q9BXF3 1484 aa34.42■■■■□ 3.1
PLXNA3-203ENST00000478236 NCAPD3P42695 1498 aa33.43■■■□□ 2.94
PLXNA3-203ENST00000478236 ATAD2BQ9ULI0 1458 aa33.32■■■□□ 2.92
PLXNA3-203ENST00000478236 SMARCA2P51531 1590 aa33.27■■■□□ 2.92
PLXNA3-203ENST00000478236 SMARCA4P51532 1647 aa33.27■■■□□ 2.92
PLXNA3-203ENST00000478236 BAZ1AQ9NRL2 1556 aaPredicted RBP33.19■■■□□ 2.9
PLXNA3-203ENST00000478236 HMGXB3Q12766 1538 aa33.14■■■□□ 2.9
PLXNA3-203ENST00000478236 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
PLXNA3-203ENST00000478236 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
PLXNA3-203ENST00000478236 PEG3Q9GZU2 1588 aa32.94■■■□□ 2.86
PLXNA3-203ENST00000478236 CUX2O14529 1486 aa32.9■■■□□ 2.86
PLXNA3-203ENST00000478236 MROH2BQ7Z745 1585 aa32.89■■■□□ 2.86
PLXNA3-203ENST00000478236 NESP48681 1621 aa32.79■■■□□ 2.84
PLXNA3-203ENST00000478236 DNAJC5Q9H3Z4 198 aa32.78■■■□□ 2.84
PLXNA3-203ENST00000478236 LAMC3Q9Y6N6 1575 aa32.64■■■□□ 2.82
PLXNA3-203ENST00000478236 PDS5BQ9NTI5 1447 aa32.55■■■□□ 2.8
PLXNA3-203ENST00000478236 WIZO95785 1651 aa32.48■■■□□ 2.79
PLXNA3-203ENST00000478236 CADPSQ9ULU8 1353 aa32.46■■■□□ 2.79
PLXNA3-203ENST00000478236 THOC2Q8NI27 1593 aaKnown RBP32.38■■■□□ 2.77
PLXNA3-203ENST00000478236 KIF21AQ7Z4S6 1674 aa32.32■■■□□ 2.76
PLXNA3-203ENST00000478236 RSF1Q96T23 1441 aaPredicted RBP32.32■■■□□ 2.76
PLXNA3-203ENST00000478236 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
PLXNA3-203ENST00000478236 TOP2AP11388 1531 aaKnown RBP32.13■■■□□ 2.73
PLXNA3-203ENST00000478236 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
PLXNA3-203ENST00000478236 CFTRP13569 1480 aa32.06■■■□□ 2.72
PLXNA3-203ENST00000478236 FANCD2Q9BXW9 1451 aa32.06■■■□□ 2.72
PLXNA3-203ENST00000478236 WDR62O43379 1518 aa32.03■■■□□ 2.72
PLXNA3-203ENST00000478236 CCDC88BA6NC98 1476 aa31.8■■■□□ 2.68
PLXNA3-203ENST00000478236 URB2Q14146 1524 aaKnown RBP31.72■■■□□ 2.67
PLXNA3-203ENST00000478236 PRDM2Q13029 1718 aa31.63■■■□□ 2.65
PLXNA3-203ENST00000478236 OSCARQ8IYS5 282 aa31.54■■■□□ 2.64
PLXNA3-203ENST00000478236 ABCC8Q09428 1581 aa31.48■■■□□ 2.63
PLXNA3-203ENST00000478236 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
PLXNA3-203ENST00000478236 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
PLXNA3-203ENST00000478236 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
PLXNA3-203ENST00000478236 DNMBPQ6XZF7 1577 aa31.32■■■□□ 2.6
PLXNA3-203ENST00000478236 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
PLXNA3-203ENST00000478236 SUPT5HO00267 1087 aaKnown RBP31.3■■■□□ 2.6
PLXNA3-203ENST00000478236 EIF4G3O43432 1585 aaKnown RBP31.12■■■□□ 2.57
PLXNA3-203ENST00000478236 AQRO60306 1485 aaKnown RBP eCLIP31.11■■■□□ 2.57
PLXNA3-203ENST00000478236 POLA1P09884 1462 aaPredicted RBP31.11■■■□□ 2.57
PLXNA3-203ENST00000478236 TARBP1Q13395 1621 aaKnown RBP31.08■■■□□ 2.57
PLXNA3-203ENST00000478236 SOGA1O94964 1423 aa31.07■■■□□ 2.57
PLXNA3-203ENST00000478236 FBLN2P98095 1184 aa31.02■■■□□ 2.56
PLXNA3-203ENST00000478236 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.55
PLXNA3-203ENST00000478236 TDRD9Q8NDG6 1382 aaKnown RBP30.97■■■□□ 2.55
PLXNA3-203ENST00000478236 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.54
PLXNA3-203ENST00000478236 RIMBP3CA6NJZ7 1639 aa30.91■■■□□ 2.54
PLXNA3-203ENST00000478236 RIMBP3BA6NNM3 1639 aa30.91■■■□□ 2.54
PLXNA3-203ENST00000478236 RIMBP3Q9UFD9 1639 aa30.91■■■□□ 2.54
PLXNA3-203ENST00000478236 CUX1P39880 1505 aa30.9■■■□□ 2.54
PLXNA3-203ENST00000478236 ARHGEF11O15085 1522 aa30.86■■■□□ 2.53
PLXNA3-203ENST00000478236 WDR97A6NE52 1622 aa30.85■■■□□ 2.53
PLXNA3-203ENST00000478236 CHD1O14646 1710 aa30.83■■■□□ 2.53
PLXNA3-203ENST00000478236 CHMP7Q8WUX9 453 aaPredicted RBP30.82■■■□□ 2.52
PLXNA3-203ENST00000478236 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
PLXNA3-203ENST00000478236 CYB5RLQ6IPT4 315 aa30.77■■■□□ 2.52
PLXNA3-203ENST00000478236 GRIN2BQ13224 1484 aa30.76■■■□□ 2.51
PLXNA3-203ENST00000478236 MAGI1Q96QZ7 1491 aaPredicted RBP30.73■■■□□ 2.51
PLXNA3-203ENST00000478236 GAPVD1Q14C86 1478 aa30.66■■■□□ 2.5
PLXNA3-203ENST00000478236 SYNJ2O15056 1496 aa30.63■■■□□ 2.49
PLXNA3-203ENST00000478236 ABCA10Q8WWZ4 1543 aa30.62■■■□□ 2.49
PLXNA3-203ENST00000478236 SYNJ1O43426 1573 aa30.61■■■□□ 2.49
PLXNA3-203ENST00000478236 WRNQ14191 1432 aaPredicted RBP eCLIP30.6■■■□□ 2.49
PLXNA3-203ENST00000478236 ARAP1Q96P48 1450 aa30.55■■■□□ 2.48
PLXNA3-203ENST00000478236 PBRM1Q86U86 1689 aa30.51■■■□□ 2.47
PLXNA3-203ENST00000478236 CLASP1Q7Z460 1538 aa30.51■■■□□ 2.47
PLXNA3-203ENST00000478236 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
PLXNA3-203ENST00000478236 TOP2BQ02880 1626 aa30.46■■■□□ 2.47
PLXNA3-203ENST00000478236 TRHP20396 242 aaPredicted RBP30.45■■■□□ 2.47
PLXNA3-203ENST00000478236 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
PLXNA3-203ENST00000478236 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
PLXNA3-203ENST00000478236 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
PLXNA3-203ENST00000478236 ADAMTS12P58397 1594 aa30.26■■■□□ 2.43
PLXNA3-203ENST00000478236 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
PLXNA3-203ENST00000478236 NUP160Q12769 1436 aa30.21■■■□□ 2.43
PLXNA3-203ENST00000478236 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
PLXNA3-203ENST00000478236 JPH4Q96JJ6 628 aa30.02■■■□□ 2.4
PLXNA3-203ENST00000478236 ERCC6L2Q5T890 1561 aa30.02■■■□□ 2.4
PLXNA3-203ENST00000478236 KIF27Q86VH2 1401 aa29.99■■■□□ 2.39
PLXNA3-203ENST00000478236 SHROOM2Q13796 1616 aa29.98■■■□□ 2.39
PLXNA3-203ENST00000478236 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
PLXNA3-203ENST00000478236 IGF1RP08069 1367 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms