RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 NISCHQ9Y2I1 1504 aa36.62■■■■□ 3.45
SNX21-210ENST00000478230 CCDC180Q9P1Z9 1646 aa32.62■■■□□ 2.81
SNX21-210ENST00000478230 ABCC9O60706 1549 aa32.07■■■□□ 2.72
SNX21-210ENST00000478230 RB1CC1Q8TDY2 1594 aa30.85■■■□□ 2.53
SNX21-210ENST00000478230 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
SNX21-210ENST00000478230 NACADO15069 1562 aa30.78■■■□□ 2.52
SNX21-210ENST00000478230 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
SNX21-210ENST00000478230 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
SNX21-210ENST00000478230 DCAF1Q9Y4B6 1507 aa30.34■■■□□ 2.45
SNX21-210ENST00000478230 PABPN1Q86U42 306 aaKnown RBP eCLIP29.96■■■□□ 2.39
SNX21-210ENST00000478230 UNC13AQ9UPW8 1703 aa29.93■■■□□ 2.38
SNX21-210ENST00000478230 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
SNX21-210ENST00000478230 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
SNX21-210ENST00000478230 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
SNX21-210ENST00000478230 DNAJC5BQ9UF47 199 aa29.55■■■□□ 2.32
SNX21-210ENST00000478230 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
SNX21-210ENST00000478230 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
SNX21-210ENST00000478230 CECR2Q9BXF3 1484 aa28.88■■■□□ 2.21
SNX21-210ENST00000478230 BAZ1AQ9NRL2 1556 aaPredicted RBP28.44■■■□□ 2.14
SNX21-210ENST00000478230 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
SNX21-210ENST00000478230 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
SNX21-210ENST00000478230 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
SNX21-210ENST00000478230 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
SNX21-210ENST00000478230 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
SNX21-210ENST00000478230 PEG3Q9GZU2 1588 aa28.16■■■□□ 2.1
SNX21-210ENST00000478230 MROH2BQ7Z745 1585 aa28.16■■■□□ 2.1
SNX21-210ENST00000478230 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
SNX21-210ENST00000478230 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
SNX21-210ENST00000478230 WIZO95785 1651 aa27.81■■■□□ 2.04
SNX21-210ENST00000478230 ERCC6Q03468 1493 aa27.75■■■□□ 2.03
SNX21-210ENST00000478230 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
SNX21-210ENST00000478230 NESP48681 1621 aa27.64■■■□□ 2.02
SNX21-210ENST00000478230 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
SNX21-210ENST00000478230 CADPSQ9ULU8 1353 aa27.59■■■□□ 2.01
SNX21-210ENST00000478230 PDS5BQ9NTI5 1447 aa27.58■■■□□ 2
SNX21-210ENST00000478230 CUX2O14529 1486 aa27.52■■■□□ 2
SNX21-210ENST00000478230 CFTRP13569 1480 aa27.34■■□□□ 1.97
SNX21-210ENST00000478230 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
SNX21-210ENST00000478230 CCDC88BA6NC98 1476 aa27.26■■□□□ 1.95
SNX21-210ENST00000478230 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
SNX21-210ENST00000478230 FANCD2Q9BXW9 1451 aa27.23■■□□□ 1.95
SNX21-210ENST00000478230 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
SNX21-210ENST00000478230 MRC2Q9UBG0 1479 aa27.21■■□□□ 1.95
SNX21-210ENST00000478230 WDR62O43379 1518 aa27.07■■□□□ 1.92
SNX21-210ENST00000478230 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
SNX21-210ENST00000478230 PRDM2Q13029 1718 aa27.03■■□□□ 1.92
SNX21-210ENST00000478230 DNAJC5Q9H3Z4 198 aa26.91■■□□□ 1.9
SNX21-210ENST00000478230 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
SNX21-210ENST00000478230 ABCC8Q09428 1581 aa26.88■■□□□ 1.89
SNX21-210ENST00000478230 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
SNX21-210ENST00000478230 DNMBPQ6XZF7 1577 aa26.7■■□□□ 1.86
SNX21-210ENST00000478230 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
SNX21-210ENST00000478230 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
SNX21-210ENST00000478230 SOGA1O94964 1423 aa26.48■■□□□ 1.83
SNX21-210ENST00000478230 ZNF608Q9ULD9 1512 aaPredicted RBP26.45■■□□□ 1.83
SNX21-210ENST00000478230 OSCARQ8IYS5 282 aa26.44■■□□□ 1.82
SNX21-210ENST00000478230 CUX1P39880 1505 aa26.43■■□□□ 1.82
SNX21-210ENST00000478230 FGD5Q6ZNL6 1462 aa26.41■■□□□ 1.82
SNX21-210ENST00000478230 TARBP1Q13395 1621 aaKnown RBP26.4■■□□□ 1.82
SNX21-210ENST00000478230 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
SNX21-210ENST00000478230 EIF4G3O43432 1585 aaKnown RBP26.34■■□□□ 1.81
SNX21-210ENST00000478230 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.81
SNX21-210ENST00000478230 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
SNX21-210ENST00000478230 TDRD9Q8NDG6 1382 aaKnown RBP26.3■■□□□ 1.8
SNX21-210ENST00000478230 WRNQ14191 1432 aaPredicted RBP eCLIP26.3■■□□□ 1.8
SNX21-210ENST00000478230 TOP2BQ02880 1626 aa26.19■■□□□ 1.78
SNX21-210ENST00000478230 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
SNX21-210ENST00000478230 FBLN2P98095 1184 aa26.18■■□□□ 1.78
SNX21-210ENST00000478230 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
SNX21-210ENST00000478230 BIVM-ERCC5R4GMW8 1640 aa26.16■■□□□ 1.78
SNX21-210ENST00000478230 GAPVD1Q14C86 1478 aa26.13■■□□□ 1.77
SNX21-210ENST00000478230 MAGI1Q96QZ7 1491 aaPredicted RBP26.12■■□□□ 1.77
SNX21-210ENST00000478230 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
SNX21-210ENST00000478230 SYNJ1O43426 1573 aa26.09■■□□□ 1.77
SNX21-210ENST00000478230 SNAPC4Q5SXM2 1469 aa26.09■■□□□ 1.77
SNX21-210ENST00000478230 CHD1O14646 1710 aa26.01■■□□□ 1.75
SNX21-210ENST00000478230 SYNJ2O15056 1496 aa26.01■■□□□ 1.75
SNX21-210ENST00000478230 ABCA5Q8WWZ7 1642 aa26.01■■□□□ 1.75
SNX21-210ENST00000478230 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
SNX21-210ENST00000478230 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
SNX21-210ENST00000478230 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
SNX21-210ENST00000478230 FHAD1B1AJZ9 1412 aa25.86■■□□□ 1.73
SNX21-210ENST00000478230 ARHGEF11O15085 1522 aa25.84■■□□□ 1.73
SNX21-210ENST00000478230 RIMBP3CA6NJZ7 1639 aa25.83■■□□□ 1.73
SNX21-210ENST00000478230 RIMBP3BA6NNM3 1639 aa25.83■■□□□ 1.73
SNX21-210ENST00000478230 RIMBP3Q9UFD9 1639 aa25.83■■□□□ 1.73
SNX21-210ENST00000478230 KIF27Q86VH2 1401 aa25.81■■□□□ 1.72
SNX21-210ENST00000478230 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
SNX21-210ENST00000478230 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
SNX21-210ENST00000478230 CLASP1Q7Z460 1538 aa25.78■■□□□ 1.72
SNX21-210ENST00000478230 CYB5RLQ6IPT4 315 aa25.72■■□□□ 1.71
SNX21-210ENST00000478230 NUP160Q12769 1436 aa25.68■■□□□ 1.7
SNX21-210ENST00000478230 IGF1RP08069 1367 aa25.68■■□□□ 1.7
SNX21-210ENST00000478230 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
SNX21-210ENST00000478230 CUL7Q14999 1698 aa25.59■■□□□ 1.69
SNX21-210ENST00000478230 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
SNX21-210ENST00000478230 CARMIL1Q5VZK9 1371 aa25.56■■□□□ 1.68
SNX21-210ENST00000478230 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
SNX21-210ENST00000478230 SHROOM2Q13796 1616 aa25.45■■□□□ 1.67
SNX21-210ENST00000478230 KIAA0586Q9BVV6 1533 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms