RNA–Protein interactions for RNA: ENST00000478197.1

C2orf88-207, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-207ENST00000478197 NISCHQ9Y2I1 1504 aa36■■■■□ 3.35
C2orf88-207ENST00000478197 CCDC180Q9P1Z9 1646 aa32.36■■■□□ 2.77
C2orf88-207ENST00000478197 ABCC9O60706 1549 aa32.06■■■□□ 2.72
C2orf88-207ENST00000478197 RB1CC1Q8TDY2 1594 aa30.67■■■□□ 2.5
C2orf88-207ENST00000478197 NACADO15069 1562 aa30.48■■■□□ 2.47
C2orf88-207ENST00000478197 DCAF8L2P0C7V8 631 aa30.28■■■□□ 2.44
C2orf88-207ENST00000478197 MYO15BQ96JP2 1530 aa30.1■■■□□ 2.41
C2orf88-207ENST00000478197 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
C2orf88-207ENST00000478197 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
C2orf88-207ENST00000478197 PABPN1Q86U42 306 aaKnown RBP eCLIP29.81■■■□□ 2.36
C2orf88-207ENST00000478197 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
C2orf88-207ENST00000478197 DCAF1Q9Y4B6 1507 aa29.77■■■□□ 2.36
C2orf88-207ENST00000478197 BICRAQ9NZM4 1560 aa29.72■■■□□ 2.35
C2orf88-207ENST00000478197 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
C2orf88-207ENST00000478197 SHROOM4Q9ULL8 1493 aa29.37■■■□□ 2.29
C2orf88-207ENST00000478197 CC2D2AQ9P2K1 1620 aa29.02■■■□□ 2.24
C2orf88-207ENST00000478197 EIF4G1Q04637 1599 aaKnown RBP29■■■□□ 2.23
C2orf88-207ENST00000478197 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
C2orf88-207ENST00000478197 SMARCA4P51532 1647 aa28.1■■■□□ 2.09
C2orf88-207ENST00000478197 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
C2orf88-207ENST00000478197 SMARCA2P51531 1590 aa28.02■■■□□ 2.08
C2orf88-207ENST00000478197 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
C2orf88-207ENST00000478197 BAZ1AQ9NRL2 1556 aaPredicted RBP27.98■■■□□ 2.07
C2orf88-207ENST00000478197 HMGXB3Q12766 1538 aa27.94■■■□□ 2.06
C2orf88-207ENST00000478197 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
C2orf88-207ENST00000478197 BAZ1BQ9UIG0 1483 aaKnown RBP27.8■■■□□ 2.04
C2orf88-207ENST00000478197 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
C2orf88-207ENST00000478197 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
C2orf88-207ENST00000478197 CUX2O14529 1486 aa27.59■■■□□ 2.01
C2orf88-207ENST00000478197 NESP48681 1621 aa27.57■■■□□ 2
C2orf88-207ENST00000478197 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
C2orf88-207ENST00000478197 WIZO95785 1651 aa27.46■■□□□ 1.99
C2orf88-207ENST00000478197 KIF21AQ7Z4S6 1674 aa27.35■■□□□ 1.97
C2orf88-207ENST00000478197 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
C2orf88-207ENST00000478197 DNAJC5Q9H3Z4 198 aa27.3■■□□□ 1.96
C2orf88-207ENST00000478197 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
C2orf88-207ENST00000478197 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
C2orf88-207ENST00000478197 RSF1Q96T23 1441 aaPredicted RBP27.18■■□□□ 1.94
C2orf88-207ENST00000478197 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
C2orf88-207ENST00000478197 MRC2Q9UBG0 1479 aa27.04■■□□□ 1.92
C2orf88-207ENST00000478197 WDR62O43379 1518 aa26.99■■□□□ 1.91
C2orf88-207ENST00000478197 CEP164Q9UPV0 1460 aa26.98■■□□□ 1.91
C2orf88-207ENST00000478197 CFTRP13569 1480 aa26.96■■□□□ 1.91
C2orf88-207ENST00000478197 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
C2orf88-207ENST00000478197 PRDM2Q13029 1718 aa26.9■■□□□ 1.9
C2orf88-207ENST00000478197 CCDC88BA6NC98 1476 aa26.75■■□□□ 1.87
C2orf88-207ENST00000478197 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.86
C2orf88-207ENST00000478197 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
C2orf88-207ENST00000478197 TOPBP1Q92547 1522 aa26.45■■□□□ 1.83
C2orf88-207ENST00000478197 ABCC8Q09428 1581 aa26.45■■□□□ 1.82
C2orf88-207ENST00000478197 IFT140Q96RY7 1462 aa26.42■■□□□ 1.82
C2orf88-207ENST00000478197 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
C2orf88-207ENST00000478197 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
C2orf88-207ENST00000478197 OSCARQ8IYS5 282 aa26.31■■□□□ 1.8
C2orf88-207ENST00000478197 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
C2orf88-207ENST00000478197 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
C2orf88-207ENST00000478197 TRIM41Q8WV44 630 aa26.2■■□□□ 1.78
C2orf88-207ENST00000478197 POLA1P09884 1462 aaPredicted RBP26.18■■□□□ 1.78
C2orf88-207ENST00000478197 CHD1O14646 1710 aa26.1■■□□□ 1.77
C2orf88-207ENST00000478197 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.77
C2orf88-207ENST00000478197 FGD5Q6ZNL6 1462 aa26.06■■□□□ 1.76
C2orf88-207ENST00000478197 RAD54L2Q9Y4B4 1467 aa26.06■■□□□ 1.76
C2orf88-207ENST00000478197 SOGA1O94964 1423 aa26.05■■□□□ 1.76
C2orf88-207ENST00000478197 CUX1P39880 1505 aa26.04■■□□□ 1.76
C2orf88-207ENST00000478197 WDR97A6NE52 1622 aa26.03■■□□□ 1.76
C2orf88-207ENST00000478197 RIMBP3CA6NJZ7 1639 aa26.03■■□□□ 1.76
C2orf88-207ENST00000478197 RIMBP3BA6NNM3 1639 aa26.03■■□□□ 1.76
C2orf88-207ENST00000478197 RIMBP3Q9UFD9 1639 aa26.03■■□□□ 1.76
C2orf88-207ENST00000478197 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.75
C2orf88-207ENST00000478197 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
C2orf88-207ENST00000478197 FBLN2P98095 1184 aa25.91■■□□□ 1.74
C2orf88-207ENST00000478197 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
C2orf88-207ENST00000478197 PBRM1Q86U86 1689 aa25.87■■□□□ 1.73
C2orf88-207ENST00000478197 GRIN2BQ13224 1484 aa25.84■■□□□ 1.73
C2orf88-207ENST00000478197 MAGI1Q96QZ7 1491 aaPredicted RBP25.84■■□□□ 1.73
C2orf88-207ENST00000478197 GAPVD1Q14C86 1478 aa25.77■■□□□ 1.72
C2orf88-207ENST00000478197 ABCA10Q8WWZ4 1543 aa25.77■■□□□ 1.72
C2orf88-207ENST00000478197 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
C2orf88-207ENST00000478197 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
C2orf88-207ENST00000478197 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
C2orf88-207ENST00000478197 CHMP7Q8WUX9 453 aaPredicted RBP25.75■■□□□ 1.71
C2orf88-207ENST00000478197 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
C2orf88-207ENST00000478197 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
C2orf88-207ENST00000478197 CLASP1Q7Z460 1538 aa25.72■■□□□ 1.71
C2orf88-207ENST00000478197 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
C2orf88-207ENST00000478197 CYB5RLQ6IPT4 315 aa25.68■■□□□ 1.7
C2orf88-207ENST00000478197 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
C2orf88-207ENST00000478197 ADAMTS12P58397 1594 aa25.55■■□□□ 1.68
C2orf88-207ENST00000478197 GRIN2AQ12879 1464 aa25.51■■□□□ 1.67
C2orf88-207ENST00000478197 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
C2orf88-207ENST00000478197 FHAD1B1AJZ9 1412 aa25.44■■□□□ 1.66
C2orf88-207ENST00000478197 CEP170Q5SW79 1584 aa25.42■■□□□ 1.66
C2orf88-207ENST00000478197 NUP160Q12769 1436 aa25.38■■□□□ 1.65
C2orf88-207ENST00000478197 TRHP20396 242 aaPredicted RBP25.37■■□□□ 1.65
C2orf88-207ENST00000478197 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
C2orf88-207ENST00000478197 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
C2orf88-207ENST00000478197 CUL7Q14999 1698 aa25.2■■□□□ 1.63
C2orf88-207ENST00000478197 RUSC2Q8N2Y8 1516 aa25.2■■□□□ 1.62
C2orf88-207ENST00000478197 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
C2orf88-207ENST00000478197 PRG4Q92954 1404 aaPredicted RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms