RNA–Protein interactions for RNA: ENST00000478189.1

HLA-DPB1-215, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-215ENST00000478189 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
HLA-DPB1-215ENST00000478189 CCDC180Q9P1Z9 1646 aa38.81■■■■□ 3.8
HLA-DPB1-215ENST00000478189 ABCC9O60706 1549 aa38.02■■■■□ 3.68
HLA-DPB1-215ENST00000478189 RB1CC1Q8TDY2 1594 aa36.53■■■■□ 3.44
HLA-DPB1-215ENST00000478189 NACADO15069 1562 aa36.45■■■■□ 3.43
HLA-DPB1-215ENST00000478189 ZCCHC6Q5VYS8 1495 aaKnown RBP36.23■■■■□ 3.39
HLA-DPB1-215ENST00000478189 MYO15BQ96JP2 1530 aa36.21■■■■□ 3.39
HLA-DPB1-215ENST00000478189 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
HLA-DPB1-215ENST00000478189 DCAF1Q9Y4B6 1507 aa35.99■■■■□ 3.35
HLA-DPB1-215ENST00000478189 UNC13AQ9UPW8 1703 aa35.86■■■■□ 3.33
HLA-DPB1-215ENST00000478189 BICRAQ9NZM4 1560 aa35.53■■■■□ 3.28
HLA-DPB1-215ENST00000478189 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
HLA-DPB1-215ENST00000478189 SCRIBQ14160 1630 aa35.35■■■■□ 3.25
HLA-DPB1-215ENST00000478189 SHROOM4Q9ULL8 1493 aa35.08■■■■□ 3.21
HLA-DPB1-215ENST00000478189 DNAJC5BQ9UF47 199 aa35.04■■■■□ 3.2
HLA-DPB1-215ENST00000478189 EIF4G1Q04637 1599 aaKnown RBP34.56■■■■□ 3.12
HLA-DPB1-215ENST00000478189 CC2D2AQ9P2K1 1620 aa34.45■■■■□ 3.11
HLA-DPB1-215ENST00000478189 CECR2Q9BXF3 1484 aa34.18■■■■□ 3.06
HLA-DPB1-215ENST00000478189 SMARCA4P51532 1647 aa33.82■■■■□ 3
HLA-DPB1-215ENST00000478189 BAZ1AQ9NRL2 1556 aaPredicted RBP33.71■■■□□ 2.99
HLA-DPB1-215ENST00000478189 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
HLA-DPB1-215ENST00000478189 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
HLA-DPB1-215ENST00000478189 SMARCA2P51531 1590 aa33.56■■■□□ 2.96
HLA-DPB1-215ENST00000478189 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
HLA-DPB1-215ENST00000478189 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.96
HLA-DPB1-215ENST00000478189 HMGXB3Q12766 1538 aa33.49■■■□□ 2.95
HLA-DPB1-215ENST00000478189 BAZ1BQ9UIG0 1483 aaKnown RBP33.31■■■□□ 2.92
HLA-DPB1-215ENST00000478189 WIZO95785 1651 aa33.18■■■□□ 2.9
HLA-DPB1-215ENST00000478189 RSF1Q96T23 1441 aaPredicted RBP33.02■■■□□ 2.88
HLA-DPB1-215ENST00000478189 NESP48681 1621 aa32.9■■■□□ 2.86
HLA-DPB1-215ENST00000478189 TOP2AP11388 1531 aaKnown RBP32.8■■■□□ 2.84
HLA-DPB1-215ENST00000478189 LAMC3Q9Y6N6 1575 aa32.79■■■□□ 2.84
HLA-DPB1-215ENST00000478189 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
HLA-DPB1-215ENST00000478189 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
HLA-DPB1-215ENST00000478189 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
HLA-DPB1-215ENST00000478189 THOC2Q8NI27 1593 aaKnown RBP32.53■■■□□ 2.8
HLA-DPB1-215ENST00000478189 CUX2O14529 1486 aa32.52■■■□□ 2.8
HLA-DPB1-215ENST00000478189 PDS5BQ9NTI5 1447 aa32.48■■■□□ 2.79
HLA-DPB1-215ENST00000478189 CFTRP13569 1480 aa32.41■■■□□ 2.78
HLA-DPB1-215ENST00000478189 CCDC88BA6NC98 1476 aa32.36■■■□□ 2.77
HLA-DPB1-215ENST00000478189 PRDM2Q13029 1718 aa32.29■■■□□ 2.76
HLA-DPB1-215ENST00000478189 FANCD2Q9BXW9 1451 aa32.25■■■□□ 2.75
HLA-DPB1-215ENST00000478189 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
HLA-DPB1-215ENST00000478189 CEP164Q9UPV0 1460 aa32.23■■■□□ 2.75
HLA-DPB1-215ENST00000478189 WDR62O43379 1518 aa32.19■■■□□ 2.74
HLA-DPB1-215ENST00000478189 URB2Q14146 1524 aaKnown RBP31.99■■■□□ 2.71
HLA-DPB1-215ENST00000478189 SUPT5HO00267 1087 aaKnown RBP31.89■■■□□ 2.7
HLA-DPB1-215ENST00000478189 TOPBP1Q92547 1522 aa31.74■■■□□ 2.67
HLA-DPB1-215ENST00000478189 DNMBPQ6XZF7 1577 aa31.71■■■□□ 2.67
HLA-DPB1-215ENST00000478189 ABCC8Q09428 1581 aa31.65■■■□□ 2.66
HLA-DPB1-215ENST00000478189 DNAJC5Q9H3Z4 198 aa31.63■■■□□ 2.65
HLA-DPB1-215ENST00000478189 IFT140Q96RY7 1462 aa31.55■■■□□ 2.64
HLA-DPB1-215ENST00000478189 TARBP1Q13395 1621 aaKnown RBP31.48■■■□□ 2.63
HLA-DPB1-215ENST00000478189 CUX1P39880 1505 aa31.47■■■□□ 2.63
HLA-DPB1-215ENST00000478189 POLA1P09884 1462 aaPredicted RBP31.46■■■□□ 2.63
HLA-DPB1-215ENST00000478189 ZNF608Q9ULD9 1512 aaPredicted RBP31.46■■■□□ 2.63
HLA-DPB1-215ENST00000478189 EIF4G3O43432 1585 aaKnown RBP31.39■■■□□ 2.62
HLA-DPB1-215ENST00000478189 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
HLA-DPB1-215ENST00000478189 RAD54L2Q9Y4B4 1467 aa31.3■■■□□ 2.6
HLA-DPB1-215ENST00000478189 SOGA1O94964 1423 aa31.24■■■□□ 2.59
HLA-DPB1-215ENST00000478189 WDR97A6NE52 1622 aa31.24■■■□□ 2.59
HLA-DPB1-215ENST00000478189 AQRO60306 1485 aaKnown RBP eCLIP31.21■■■□□ 2.59
HLA-DPB1-215ENST00000478189 BIVM-ERCC5R4GMW8 1640 aa31.19■■■□□ 2.58
HLA-DPB1-215ENST00000478189 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
HLA-DPB1-215ENST00000478189 TOP2BQ02880 1626 aa31.16■■■□□ 2.58
HLA-DPB1-215ENST00000478189 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
HLA-DPB1-215ENST00000478189 TDRD9Q8NDG6 1382 aaKnown RBP31.08■■■□□ 2.57
HLA-DPB1-215ENST00000478189 CHD1O14646 1710 aa31.04■■■□□ 2.56
HLA-DPB1-215ENST00000478189 ABCA10Q8WWZ4 1543 aa31.04■■■□□ 2.56
HLA-DPB1-215ENST00000478189 ABCA5Q8WWZ7 1642 aa31.02■■■□□ 2.56
HLA-DPB1-215ENST00000478189 PBRM1Q86U86 1689 aa31■■■□□ 2.55
HLA-DPB1-215ENST00000478189 OSCARQ8IYS5 282 aa30.99■■■□□ 2.55
HLA-DPB1-215ENST00000478189 SNAPC4Q5SXM2 1469 aa30.95■■■□□ 2.55
HLA-DPB1-215ENST00000478189 GRIN2BQ13224 1484 aa30.94■■■□□ 2.54
HLA-DPB1-215ENST00000478189 GAPVD1Q14C86 1478 aa30.91■■■□□ 2.54
HLA-DPB1-215ENST00000478189 MAGI1Q96QZ7 1491 aaPredicted RBP30.9■■■□□ 2.54
HLA-DPB1-215ENST00000478189 SYNJ2O15056 1496 aa30.77■■■□□ 2.52
HLA-DPB1-215ENST00000478189 ADAMTS12P58397 1594 aa30.72■■■□□ 2.51
HLA-DPB1-215ENST00000478189 FBLN2P98095 1184 aa30.72■■■□□ 2.51
HLA-DPB1-215ENST00000478189 RIMBP3CA6NJZ7 1639 aa30.72■■■□□ 2.51
HLA-DPB1-215ENST00000478189 RIMBP3BA6NNM3 1639 aa30.72■■■□□ 2.51
HLA-DPB1-215ENST00000478189 RIMBP3Q9UFD9 1639 aa30.72■■■□□ 2.51
HLA-DPB1-215ENST00000478189 CLASP1Q7Z460 1538 aa30.69■■■□□ 2.5
HLA-DPB1-215ENST00000478189 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
HLA-DPB1-215ENST00000478189 ARHGEF11O15085 1522 aa30.66■■■□□ 2.5
HLA-DPB1-215ENST00000478189 CHMP7Q8WUX9 453 aaPredicted RBP30.63■■■□□ 2.49
HLA-DPB1-215ENST00000478189 GRIN2AQ12879 1464 aa30.58■■■□□ 2.49
HLA-DPB1-215ENST00000478189 FHAD1B1AJZ9 1412 aa30.55■■■□□ 2.48
HLA-DPB1-215ENST00000478189 CEP170Q5SW79 1584 aa30.49■■■□□ 2.47
HLA-DPB1-215ENST00000478189 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
HLA-DPB1-215ENST00000478189 NUP160Q12769 1436 aa30.46■■■□□ 2.47
HLA-DPB1-215ENST00000478189 KIF27Q86VH2 1401 aa30.45■■■□□ 2.46
HLA-DPB1-215ENST00000478189 ARAP1Q96P48 1450 aa30.42■■■□□ 2.46
HLA-DPB1-215ENST00000478189 CUL7Q14999 1698 aa30.39■■■□□ 2.46
HLA-DPB1-215ENST00000478189 IGF1RP08069 1367 aa30.36■■■□□ 2.45
HLA-DPB1-215ENST00000478189 SHROOM2Q13796 1616 aa30.33■■■□□ 2.45
HLA-DPB1-215ENST00000478189 RUSC2Q8N2Y8 1516 aa30.29■■■□□ 2.44
HLA-DPB1-215ENST00000478189 ERCC6L2Q5T890 1561 aa30.25■■■□□ 2.43
HLA-DPB1-215ENST00000478189 CYB5RLQ6IPT4 315 aa30.22■■■□□ 2.43
HLA-DPB1-215ENST00000478189 CARMIL1Q5VZK9 1371 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms